Basic Information

Gene Symbol
Kdm5
Assembly
GCA_028583605.1
Location
CM053333.1:1787446-1799949[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 9.1e-15 5.5e-11 43.7 0.0 21 89 100 165 72 165 0.90
2 3 4.5 2.7e+04 -3.4 0.0 49 82 754 785 751 789 0.71
3 3 0.054 3.3e+02 2.8 0.0 32 79 1185 1231 1171 1239 0.74

Sequence Information

Coding Sequence
atgaCTTCCAAGGAAAAGCTTATGAATGGGATGAAACCTACGACTAGCAACAAGCACACGGGGTTTACTAAGCACGAAAATGGATACGGGTTCAAAGAAGAAGGTTTCCTGTTCAACGTTCCGCCAGAAGCGCCTGTTTTTTACCCAACAGAGGAAGAATTCGGCGATCCCCTCGCGTATATTAGCAAGATCCGTCCAGTTGCGGAAAACACGGGCATTTGCAAAATTAAGCCACCTCCGaattggCAACCACCTTTTGCCGTGGATGTCGATAAATTAAGATTTACTCCAAGAATTCAACGTTTAAATGAATTAGAGGCCAAAACTCgcGATTTGTATACTTTGCATCGAGTTGTGCAATTGGAAGGGGGATTTGAAGGTGCCACCAAGGATAGGAAATGGTCCAAAATATCTATCAGATTGGGTTATCCGGCTGGGAAAAGTAtaggtacaattttgaaaacgcaTTATGAAAGACTGCTTTATCCGTTTGATGTTTTCAAACAAGGGAAAACTTTAGAAATTaaaatcgaaccAGATGTTTCGACGGGGGAATCCGAGAAGGCCGACAAAGACTATAAACCGCACGGGATCGTTGGCAGGATGGCCATAAAGCCACCACCAGAGAAAAACGCCAGACGATCCAAGAGATTTGAAAATGACGAAACAAAAGTGAAAGTCAAAGATGAAGTAAAGGATGAAAAATTGAAGGATGATAAAGTAAAGGATGAGAAAATTAAAGACGAAGCTGATGGGGAGAATAATAAAGAATTGAAAAGACTTCAATTTTATGGCGCGGGACCCAAAATGGCCGGTTACAACGAcgtcaaaaaagaagaaaaacgagGCAAGAATTCCATGTTTGAAAACGATCCTTTGGCGAAATACGTCTGTCATAATTGCAACAGAGGTGATTCTGAAGAATATATGCTGTTATGCGACGGATGCGACGACAGTTATCACACATTTTGTTTAATGCCGCCGTTAACTGAAATACCAAAAGGAGATTGGCGTTGTCCAAAATGCGTGGCTGAAGAAGTATCGAAGCCGATGGAAGCGTTTGGTTTTGAACAAGCTCAACGCGAGTATACCTTACAACAATTCGGGGAAATGGCTGATCAGTTTAAGTCTGAGTATTTTAATATGCCCGTTCACATGGTACCACTAGCGACAGTAGAGAAGGAATTTTGGCGAATAGTTTCTTCCATTGACGAGGATGTTACGGTCGAATATGGGGCTGATCTTCATACGATGGATCATGGATCCGGATTTCCCACAAAAACATCACTTAATCTGTTTCCTGGTGATAAAGAGTATGCGGATTCCAGTTGGAATTTGAACAATTTACCAGTCCTTGAAGGTTCAGTTTTAGGATATATAAACGCGGACATTTCTGGTATGAAGGTGCCCTGGATGTATGTAGGTATGTGCTTTGCGACCTTTTGCTGGCATAACGAAGACCACTGGAGTTATTCCATTAATTATCTGCATTGGGGAGAGGCTAAGACGTGGTACGGAGTTCCTGGTAATAAAGCGGAGTCTTTTGAAGAGACAATGAAATCGGCGGCACCAGAACTGTTCCAGTCACAACCAGATCTTCTACATCAGTTGGTTACCATCATGAATCCTAATATCCTGATGAATGCAGGAGTTCCAGTTTATCGAACCGATCAATGCGCTGGAGAGTTTGTTGTGACTTTCCCCAGAGCCTATCATGCTGGTTTTAATCAAGGGTACAACTTTGCCGAAGCGGTTAATTTTGCACCAGCTGATTGGCTTCGAATGGGTAGAGAATGCATCAGCCACTATTCACATCTTAGGAGATTCTGCGTTTTTTCTCACGACGAATTGGTCTGTAAGATGGCTCTTGATCCGGACAAATTGGATTTGACCATCGCTGCGGCAACATACCAAGATATGTTGCAAATGGTCGATACGGAGAAAAAACTACGGAAACAACTTCTGGATTGGGGTGTTACCAATGCAGAACGAGAAGCCTTCGAGTTACTTCCAGACGACGAAAGACAGTGCGACGTGTGCAAAACGACCTGTTTCCTCTCAGCGGACGAGTTACCTGTGATGCTTAAAGCTTTGAAACTAAAGGCTGAATCGTTCGATCATTGGGTTAGCCGCGTTAAAGACGTTTTGGATCCTCTAACACCCAAAGTCATGAACTTGACGGAACTAAAGGCACTCTTACACGAGGCCAATGGAAAGAAATTCCCGAAATCTGACCTACTCCAAACACTTACAACTGCTGTCGAAGACGCCGAAAAATGCGCCAGCGTTATTCAACAGCtcgatttaaacaaaattcggaCTAGAACTAGGAACTCCCTGGATACAAAGTACAAATTAACTATCGAAGAACTGACTTTATTTTGCGAAGAAATCGATAGTTTAGTGTGTCATTTAGAAGAAGGTAAAAGCGTTAAAGATTTACTGGAACAAACTAAACAGTTCGAAAGGGAAAGCGAGAGGTTGCTCACTATGAAGTTGACAGAGTGTCAAGTTCCAGAGCTTGAAGCGTGTTTCAATCAGGGAAATGCGCTGTGTATCGAGCTTCCAAATTTGAAACGTATTTCGACGAGGATCAAGCAAGCCTCTTGGTTGAAAGATGTTCTTTCATATAAGAAGCGAGTGGAGGTGTTGGGCTTGGAATCCATCAGGAACTTAATTAAGACTGGTGTGGGTTTACCGCCAAATCCGGAAATGGAGGAGGAACTGAGTAATTTGCAAGGTTTACTAACTGCGAGCGAGGAGTGGGAGGCAAGGGCGCAAGCCGTGTTAAAAGATACAAGCTCGGAGGTGTTGATCGAAGTGGATAAGTTGCTCGTTTTGGCGGCGAATATAAACGCGTATCTACCGACGGAAGAGTACTTATTCGACGCTATTAACCGCGCGAGGGATTGGTTGAGGTTGCAAGAGGAAATGAATTCGGCGGAGTATTATCCCTATTTTCACGCTATGGAAGAACTAGTTAAAAAGGGACGAGGCTTACCGTTGCATCTGGTGGAAGTGACGCGATTGGAGTCATATTTGGATGCGGCTATTTCTTGGAAAGAGAAAACGAGTAGAGCATTTCTTCGGAAGAACTCTCTCTGTACGTTGATGGAGGCGTTATCTCCGAGGTCAACCCTAGCTCCTCTGGGTAAAGGTAAGCGGAAGAATCAGGAAGAAGGTGGCCTTCATTTTACTGATAATATGGATCCTGTTACGGTGGTAAATCTCTTTAAAGATGCCGAAGATAAAGAAATGGATTTATTAAGGACTATTAGGGCCGAAAATAGGGCCAAAAGTATGGATCCTAACGATTGTGCGTCATTCTGTCTTTGCCAAAGAGGACTTTTTGGTTTGATGATGCAGTGTGAGCTCTGCAAAGATTGGTTCCACTCGGTTTGCGTGCAGTTGCCAAAAGTGGCAACAAGTAATTATAAGGGGAACTTCACCAGTGTTGCTCTCCATTACGGTTTTAAAGATTGCAAGTTCTTATGTCCTAACTGTTATAGGACAAAACGACCTCGATTGGATGTGATTCTTAGTCTTTTGATGTCGCTTCAGAAACTCTACGTTCGCGTACCTGAAGGCGAGGCCTTGCAATGTCTAACTGAGAGAGCGATGAATTGGCAAGATCGCGCTAGACAGCTTTTGGGGCAACCTGAATTGGAAAATGCTAAAAGCAAGTTGTCGACTTTTAGTCAGAAGTATTCTGAAGCCGCTGCGAGACAAAGGACTGAGAAAATTATTTCCACTGAGCTGaagaaagcttttaaaaatccaGATTTGCACCAACGTGTACAGGAAATTGCACATTCTAGTGGTATTAATGAAGAATTTAGCGAAAGTTCGATTAATGACTCTGACGATTCCAAAGAATGTACTTCCACGGCAGACGATCATATGGACGAACATGCTTATTCTTTGCATCTTCCCAAACTTGAAGAAGGAGAGTACAAATTGCAGATTAGTTATGAAATCAAGCAGCAGATGGAGGAGCTTTTAATGGAAGGAGATTTACTCGAGGTTCATTTAGATGAAACGTTCCAGATGTGGAAGCTTCTTCAGGCAACGAGAGATCCAGACAAAGAGTACATACTAATAGATTTTGATGCCCAATCCAGGAGTACTCCCGTTAAAAGGGGTAGGAAACGTAGGTCCGAAGAATCGGAGGCCGCTCGCAAGGTAAAGGGCGTCAAAGCGGAAATTGACAAAAAGCCGAAAGCTCGCAAAACGAAAGAATCGAAAGATGTTCAAAAGAAGAAAGATTCGCCCAAGCGTAAAGGTCGACGTCGTCAGTCGACGTCAGATGATGACGATGAAGAGTTATGCGCGACAAGTACCTGTCTTAAACCCACCGGGCAGAACGTGGACTGGGTTCAGTGCGACGGTGGTTGCGAACAATGGTTCCATATGGCTTGCGTGGGATTATCGGCGCAAGAAATAAATGAGGATGAAGACTATATATGTATGTCTTGTTCTAAATCCACTACATTTGAGAGTTACGATACAAGCGATAGTCGTTCAGTCAGCCCAGTGTCTCCCGATTCTACGCAGATTCCGATTCACCAGCATCATATGATCAGTAAAGACATTTCAGTGCAGGTTTAG
Protein Sequence
MTSKEKLMNGMKPTTSNKHTGFTKHENGYGFKEEGFLFNVPPEAPVFYPTEEEFGDPLAYISKIRPVAENTGICKIKPPPNWQPPFAVDVDKLRFTPRIQRLNELEAKTRDLYTLHRVVQLEGGFEGATKDRKWSKISIRLGYPAGKSIGTILKTHYERLLYPFDVFKQGKTLEIKIEPDVSTGESEKADKDYKPHGIVGRMAIKPPPEKNARRSKRFENDETKVKVKDEVKDEKLKDDKVKDEKIKDEADGENNKELKRLQFYGAGPKMAGYNDVKKEEKRGKNSMFENDPLAKYVCHNCNRGDSEEYMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSEYFNMPVHMVPLATVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSLNLFPGDKEYADSSWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEAKTWYGVPGNKAESFEETMKSAAPELFQSQPDLLHQLVTIMNPNILMNAGVPVYRTDQCAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLRMGRECISHYSHLRRFCVFSHDELVCKMALDPDKLDLTIAAATYQDMLQMVDTEKKLRKQLLDWGVTNAEREAFELLPDDERQCDVCKTTCFLSADELPVMLKALKLKAESFDHWVSRVKDVLDPLTPKVMNLTELKALLHEANGKKFPKSDLLQTLTTAVEDAEKCASVIQQLDLNKIRTRTRNSLDTKYKLTIEELTLFCEEIDSLVCHLEEGKSVKDLLEQTKQFERESERLLTMKLTECQVPELEACFNQGNALCIELPNLKRISTRIKQASWLKDVLSYKKRVEVLGLESIRNLIKTGVGLPPNPEMEEELSNLQGLLTASEEWEARAQAVLKDTSSEVLIEVDKLLVLAANINAYLPTEEYLFDAINRARDWLRLQEEMNSAEYYPYFHAMEELVKKGRGLPLHLVEVTRLESYLDAAISWKEKTSRAFLRKNSLCTLMEALSPRSTLAPLGKGKRKNQEEGGLHFTDNMDPVTVVNLFKDAEDKEMDLLRTIRAENRAKSMDPNDCASFCLCQRGLFGLMMQCELCKDWFHSVCVQLPKVATSNYKGNFTSVALHYGFKDCKFLCPNCYRTKRPRLDVILSLLMSLQKLYVRVPEGEALQCLTERAMNWQDRARQLLGQPELENAKSKLSTFSQKYSEAAARQRTEKIISTELKKAFKNPDLHQRVQEIAHSSGINEEFSESSINDSDDSKECTSTADDHMDEHAYSLHLPKLEEGEYKLQISYEIKQQMEELLMEGDLLEVHLDETFQMWKLLQATRDPDKEYILIDFDAQSRSTPVKRGRKRRSEESEAARKVKGVKAEIDKKPKARKTKESKDVQKKKDSPKRKGRRRQSTSDDDDEELCATSTCLKPTGQNVDWVQCDGGCEQWFHMACVGLSAQEINEDEDYICMSCSKSTTFESYDTSDSRSVSPVSPDSTQIPIHQHHMISKDISVQV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-