Basic Information

Gene Symbol
nfxl1
Assembly
GCA_949768715.1
Location
OX458317.1:367088-374550[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.19 3.8e+03 -0.9 0.4 4 10 203 209 202 209 0.95
2 16 5.2e-08 0.001 20.1 13.6 1 19 217 234 217 234 0.99
3 16 5.6e-07 0.011 16.8 19.7 1 19 270 288 270 288 0.99
4 16 2 4e+04 -4.1 1.0 6 10 313 317 312 317 0.88
5 16 3.7e-08 0.00074 20.6 15.0 1 18 323 340 323 341 0.97
6 16 0.00025 5 8.3 9.1 1 18 376 393 376 394 0.96
7 16 0.54 1.1e+04 -2.3 0.6 1 5 403 407 403 412 0.89
8 16 5.8e-05 1.1 10.4 15.6 3 18 430 445 428 446 0.92
9 16 1.2e-09 2.4e-05 25.4 11.6 1 18 455 472 455 473 0.97
10 16 0.0013 25 6.1 5.9 10 19 522 531 519 531 0.90
11 16 0.095 1.9e+03 0.1 5.6 4 12 543 551 541 551 0.90
12 16 2 4e+04 -7.4 4.5 14 18 579 583 579 583 0.86
13 16 0.3 5.9e+03 -1.5 0.5 6 10 610 614 609 616 0.86
14 16 0.0047 93 4.3 5.7 1 12 620 631 614 634 0.82
15 16 4.9e-07 0.0098 17.0 18.4 3 19 661 677 660 677 0.94
16 16 2.5e-05 0.49 11.6 8.4 1 15 719 732 719 734 0.97

Sequence Information

Coding Sequence
ATGAGTGAAAACATCCGCAATCAAAAGAAGGGCAATCAAAATGCATGGAATACCAATAAAATTCAAACTAAAAAGCAATCGTCGACTCAACATAACCTAAAACCAACATCAACAGccgaacataaatttaaagaagCCCAGTTAAAGTTACAAGCTGCCGTACAAAAATACGCTAAAGAATACGAATCTTCATCAGAAGATGAAGATTATCAATCAAACAATGTTATCGATTCTGTGATAAAAAAGTATTCAGAATCCGGTGGCCGTGCCAACTCTTTGGGGCGCACTCAAACATTTTTGGAAGATTCTTTTCAGTCAGGCGCTTGTCTAATCTGCATAtcgacaataaaaaaatcagaatctaTTTGGAATTGCGCATCATGTTACTGTTATTTTCACTTGACGTGCATTCAGCGCTGGTCGAAGGATTCCGTCTTCCAACAGAAGCAGAATTTGGAAGGTCGCATTCAAGCTTACGTTTCCCTGAAACTTTTTTGGGGCTGTCCAAAGTGTCGATTTGAGTACAACCCTTCGTACATTCCTCTGGAATACAGATGTTTTTGTGGAAAAGTTGTTGACCCTCCTTTTCAGCCTCTTTTAGTTCCTCATTCATGCGGCGAAATTTGCGGAAAGCCATTGAAGCCATCATGTGGCCATTTTTGCATACTTTTATGCCACCCTGGCCCTTGCCCGCCTTGTCCAACCACTGTGAAAGTTACATGCTACTGTGGTTTACAACCGCCAAGACTGCAACGGTGTAGCAGCAAAGAGTGGTCTTGTGGATCCCCTTGCTCTAAGTTATTGGCATGTGGAAAGCATAAGTGTGAACAACCCTGCCATCATGACGATTGTCCACCGTGTCCTAAGAAAagtattcaaaaatgtttgtgtAAATCAAGTCATAAATTAAGAGATTGTTTGTCACCAATTTGGCAATGCGATAAAGTTTGTAACAAACCGATAGATTGTGGGCATCATAATTGTTTGAAAGTTTGTCATTCTGGAGACTGTGGTTCATGCGAGCTATCAAAACCTCGTGCATGTCCTTGTGGAAAATCTACGCATGAGTTGCCTTGCACTGAAGATACACCAACTTGTGGAGACACTTGTGGAAAATTGTTGGAGTGTTCCTTACATATTTGTAATCAACGCTGCCACAAAGATAAATGTGGCACTTGCTTGGATTATATTGTTCAAACATGCAGATGTGGCTTGCACACAAAGGAGGTTCAGTGCAGTAAACCTTACTTGTGTGAAACAAAATGTAAGCAGTTTAGAGATTGCtacaaacatccttgtaataGAAAGTGTTGTGACGGCAATTGTCCACCATGTGAGAAATTATGCAATCGAACATTAACCTGCAGCAATCATAAATGCAGTTCTGTATGCCACCGAGGCCCTTGTTATCCTTGCAATTTAACAGAAACAGTTTCCTGTCGATGTTCAGGCACCATAATTACAGTTGCATGTGGccgtaaaaataaaacaaaacctCCAAAATGCAACATACATTGTTCcaTTTCCCCAGACTGTCATCATGAACGCCGTGAACCCCACCGTTGTCATTTTGGCGATTGTCCATCCTGTAGGCAAATATGTAACAAGAGTTTTGCAAATTGTCCACATAAATGCCTTGCAAGTTGTCATTCTGCAGTTTTTGTTAAAACTGAAGGTCAAAAGGCGACCATGCCTTGGGAAGATACCGGGCCTAAgatagaattaaaaaatttgccgTGTCCAGATTGCATTGTACCGGTTCCTGTTACTTGCTTGGGAAAACATGAAACTTGCGATTATCCCTGTTATTTAGCAAAGTCGGCGAGTTGCCAGAGACCTTGTGGAAGAATGCTGAAGTGTGAGAATCATAATTGCTCTTTATTGTGCCACACAGTTGAAGGTTCATTTGATGATCTTAAGGCTGGAACAAACTGTGAGAATTGTGAACGCGAATGCAGCAAGTCACGACCAGAAGGTTGTCAACACACATGTTTGAAGCCGTGCCATCCAGGTCCTTGCCCGCCTTGCAAACAAATGTTACGCATTCGCTGCCACTGCGGACTTAATCAACCTTACGTAGTTTGCAGTGAATGGATGTTGGGTAACAAAGAAGAACTGCAAAGTTGCGCAAATCAATGTCCTAAAAATTACAATTGTGGACATCGATGCCGCTCAAACTGCCACTCGGGATCTTGTGTGAATTCTGAAGGTTGCAAGAAGAAAGTGAAAGTGTTTTGCAACTGCAAACGGATCAAAAAAGAATTCTCCTGTGCCGTTGTCGTTCTCGGCGGTGTAGCCATCGAATGCGATGAAATCTGTGGTAAGAAGAAAGAAGAGGAGAAACGAATTCAGGACTTGCAAAACGAGCAGAAAAAACGGGATGAGGAATTGAAGAACTTGAAGGAACTGAAAGAATTCGAAAGAAAGTTTCAAGGGAAAAAGAAACTTAAGGAGCGACATGTTACCAAAGAATTTTGGGATTGGTTCGTTCACGTGGAAGGCTTAAGTCATCATTTAAAGTATCAACCGACATATCTTATTGcccaatttacatttttgttgGGAGCAGTTCTGACATTAATACATgCACTTGTAAGAGGAGGTCGCTTACCGTACCTATGGCTTGGGACATTGCTACACGGTTTAGTAATCGAATCTGTTTGTTATTTTCTACCAGACATAGACAATTTTTGGCATTCACAAACGCCAATAATATTCTTAGGTCGCCGATTACCACTCCACATCATAGttttatATCCATGTTTCATTTACAATGCATCAATTGccgtttcaaaaatgaaacttCCGGCGTGGTCGGAACCTTTCGCTGTAGGTTTAGGCTCCGTTTTAATTGATATACCTTACGACATTATGAGTGTTAACTTCTTACACTGGACTTGGCACGACACTGACCCGAATATTGGCGACAGACATTATTGGGTGCCTTGGAATTCCTACTATTTTCATGCCTGTTTCGCTGCTAGCTTTACGTTTTGGTTTCACACTTCCAGAAAGTTTATTTGCAAGCCTCAAGGTAAATGGATTCCCTGCTGtgttGAATCTGAATTAGCTAGTATGGTCATAGCGTGTCTTCTCGGTATGCCTGGTGGtgtgttattatttttgcCGATTTATCATCCGCTGCATgatattttcaaattgcacagtgaaaatacttttttcattcTCTTcactatatttttgttgctCATTTGGTTAGGTGACCGAAAAGCAAAAGAAAATACTAACAACAAATCGACTTTTCATTGGAGCACCTGGTTGCTGATTTTCCATTTAACTGTTCATTATCTTAGCTTCTTGGCAATGGCACTATTCTTCAATGCTGAGGATGAAGTGTCAATTGGTTTGAAAGAACCGATTGGGGCTTGCGATAAATATGTACCCATTCAAACGGCTTTTGGAATGACATTGCAGAAGAGAAAATATCTCTGCGCGACTGACTATGACGAAAAGTATTTCGACTGGCATTGTCTGCCCGAGGGAAAACCTCCGGCAGACGGTTCCAGTTGGTATACCGCTTGTGGCGTGCCTCTACCCAATCGCGCTGAATACATTGCAATTACTAGTTTAATCTGTTTACTGGCAACTACGGTTTGGGGAACTCTACACTTCTGCTCTTATGGAGATGACGTTTTATCGAACAAATCGACACAAAAACAGgcagttaaaaaaatgaaaaccaagtaa
Protein Sequence
MSENIRNQKKGNQNAWNTNKIQTKKQSSTQHNLKPTSTAEHKFKEAQLKLQAAVQKYAKEYESSSEDEDYQSNNVIDSVIKKYSESGGRANSLGRTQTFLEDSFQSGACLICISTIKKSESIWNCASCYCYFHLTCIQRWSKDSVFQQKQNLEGRIQAYVSLKLFWGCPKCRFEYNPSYIPLEYRCFCGKVVDPPFQPLLVPHSCGEICGKPLKPSCGHFCILLCHPGPCPPCPTTVKVTCYCGLQPPRLQRCSSKEWSCGSPCSKLLACGKHKCEQPCHHDDCPPCPKKSIQKCLCKSSHKLRDCLSPIWQCDKVCNKPIDCGHHNCLKVCHSGDCGSCELSKPRACPCGKSTHELPCTEDTPTCGDTCGKLLECSLHICNQRCHKDKCGTCLDYIVQTCRCGLHTKEVQCSKPYLCETKCKQFRDCYKHPCNRKCCDGNCPPCEKLCNRTLTCSNHKCSSVCHRGPCYPCNLTETVSCRCSGTIITVACGRKNKTKPPKCNIHCSISPDCHHERREPHRCHFGDCPSCRQICNKSFANCPHKCLASCHSAVFVKTEGQKATMPWEDTGPKIELKNLPCPDCIVPVPVTCLGKHETCDYPCYLAKSASCQRPCGRMLKCENHNCSLLCHTVEGSFDDLKAGTNCENCERECSKSRPEGCQHTCLKPCHPGPCPPCKQMLRIRCHCGLNQPYVVCSEWMLGNKEELQSCANQCPKNYNCGHRCRSNCHSGSCVNSEGCKKKVKVFCNCKRIKKEFSCAVVVLGGVAIECDEICGKKKEEEKRIQDLQNEQKKRDEELKNLKELKEFERKFQGKKKLKERHVTKEFWDWFVHVEGLSHHLKYQPTYLIAQFTFLLGAVLTLIHALVRGGRLPYLWLGTLLHGLVIESVCYFLPDIDNFWHSQTPIIFLGRRLPLHIIVLYPCFIYNASIAVSKMKLPAWSEPFAVGLGSVLIDIPYDIMSVNFLHWTWHDTDPNIGDRHYWVPWNSYYFHACFAASFTFWFHTSRKFICKPQGKWIPCCVESELASMVIACLLGMPGGVLLFLPIYHPLHDIFKLHSENTFFILFTIFLLLIWLGDRKAKENTNNKSTFHWSTWLLIFHLTVHYLSFLAMALFFNAEDEVSIGLKEPIGACDKYVPIQTAFGMTLQKRKYLCATDYDEKYFDWHCLPEGKPPADGSSWYTACGVPLPNRAEYIAITSLICLLATTVWGTLHFCSYGDDVLSNKSTQKQAVKKMKTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-