Basic Information

Insect: Dascillus cervinus
Gene Symbol: -
Assembly: GCA_949768715.1
Location: OX458317.1:9404155-9406961[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2.8 1.8e+02 4.0 1.7 2 23 272 294 271 294 0.94

2 9 0.0061 0.4 12.3 0.2 1 23 344 367 344 367 0.95

3 9 6.7 4.4e+02 2.7 0.8 2 23 476 498 475 498 0.76

4 9 3.7e-05 0.0024 19.3 1.8 1 23 504 526 504 526 0.94

5 9 0.00032 0.021 16.4 3.8 2 23 540 562 539 563 0.96

6 9 0.00016 0.01 17.3 2.2 1 23 568 590 568 590 0.98

7 9 0.01 0.67 11.6 3.4 1 23 596 618 596 618 0.99

8 9 0.0034 0.23 13.1 1.5 1 23 624 647 624 647 0.95

9 9 0.3 20 7.0 0.4 1 23 654 676 654 676 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2.8	1.8e+02	4.0	1.7	2	23	272	294	271	294	0.94
2	9	0.0061	0.4	12.3	0.2	1	23	344	367	344	367	0.95
3	9	6.7	4.4e+02	2.7	0.8	2	23	476	498	475	498	0.76
4	9	3.7e-05	0.0024	19.3	1.8	1	23	504	526	504	526	0.94
5	9	0.00032	0.021	16.4	3.8	2	23	540	562	539	563	0.96
6	9	0.00016	0.01	17.3	2.2	1	23	568	590	568	590	0.98
7	9	0.01	0.67	11.6	3.4	1	23	596	618	596	618	0.99
8	9	0.0034	0.23	13.1	1.5	1	23	624	647	624	647	0.95
9	9	0.3	20	7.0	0.4	1	23	654	676	654	676	0.97

Sequence Information

Coding Sequence: ATGGATGAAACATATGATACATCATATCTTATgtatttaaatggaaaatcaCAAAACTATCTTCTTCAAAATAGCGATGAAATATTAGGAGTTCATGATTCCAATTTCACACCAATCCTTGGTGAAAATGAAGATGGTAGTACAGCTTGGACTGTAGAACATATTCCTATATTAATGAGTGGAACTTTAATGCCTGATGatcaAATAGCCCAGTCaacagaaaatataaataacaattctGACACATGTACTTCAATTTACAATCAACAAAGTCAAAGAGAATCACCATTTAGTAATGCAGAAGCCCAAGAAGAATCAACAATATATCCATTAGAGgttCCTGGAAAAGGTTTTATAACAGCACAGGGCTTGTTTATTACTAACGATCTTTTATTTCAACTGAAGGAAAAACATAACTCAAATTCTCAAAAAGTTGTGAATGAAGATGAACTTGGACAAATTGAATTAGTTGATAGCAATCTCATGGAAAGTGATATTTCACAACTATCAGGAAAAGTACGGATTATTTTAGATGATGAAGATAATTTAAGTAGTGATAATCAGAATTCAGATGAAACACATTTGAATTTTGATGAGAATGTGGATAATCAGTTATTCGAAGTACCCAACTTGCATGAACCTGAAGAGATAATACAGTTGTTCAATGCTGATGGCACTGTTACAAATATTAATAAGtctttattcaattttaatgtGGCAAAGAATCAACGTGTTTTACCTGATACTACTGAAGTTATAACAGAACATTCAGGTGTGCATTATGAGGACTTCTATGAAGTAATTATGGCACAGAAATGTAGGAAATGCtcatttttaagtgaaaataaGACAAATATGAAGCAACACATAGAAAATATACATCTAACAGCTAATATGAGTGTGTTAAATGGACAACATAATTCCgggaaaaaaacaattagaaTTAATAAATCCCCAATCAATGGTGAAGTTAAAATGAAGTCTATTTTAGCAGTAAATAACTTTAGAAAACCGGATCAGCAAACTGTGTATCTTTGTAGCGAATGCAGACTTGGATATGCTTCAACTGAAGATCTTAAGAATCATATGATTAaggaGCACAAGTTGATTGGACTATCTGATGAAGTTAAAAGTGGCCCAAAGGAAGAATCAATAAAAGATGATAATACTAAGGTTGTCAATAAAATGCAGATCTCAGCAgcattaattagaaaaaagcAAAAGGCttcaaagaaaataaagTGTTCTATTAAAGGTTGTGAGTTAAGATTTACTCGTGATGAATTGCGAGCTAGACATGAAGAATGTCATATTGAgggtaaaaaaaaacagtttaaatgTTCTTCTTGTGAtgagaaattttttatttggcgTGTGTGCAGTATACATTTGTGGAAATGTCACAGTATTGACACAGGTCTCCTTACTTGTCCAatgtgtaataaatttaaagctTCAACTCCAGTTCGTCTTCTGACTCATATGGCAATTCATGATGATGAAAAACCTTTTTTATGTAGTACTTgtggaaaaacatttaaacaattcaCACAATTAAGAAACCATCAAGTCATTCATGAAACTAAAGACAAAGTTCCGGAATGGGCAACCCAACAGCAGTGtgaaatttgtgaaaaatacTTTGCCAATCATAagactttaaaaaaacacattcagTCAGTTCACCATCAATTTAAACCTTTTATGTGTAATATATGTGGGCACAAAACTACTCGAAAAGCGATGTTAAATTTGCATTTGCGACAACATACTGGAGAAAAGCCATACAAGTGTACAATCTGCACTTTTAGAACAGGTGATCATAATTCATTACGAAGACATGTAATGCGACATAAAGggGATATGAAATATTCCTGTCCTCATTGTGATTATAAGTCAATACAAAGTACGGCTTATAAAAATCATATTGCTAATAAGCATCCCGGCCTTGGAGGTTCATATTTCTGTGTAATTTGTACTTACCATACAGTTAATGAAATTGCCTATTTAGCGCATATGAAAGCTCATGAAAATGGTTCATTAAGAGAGAAAACTTTGAATCATAATCGAAAGAATGAGACAATACAACATAAGCTGGATGTAATTACTGGAGAAAAAGAATATTCTGAAGTTACTAACAAAATCACTAGTctGAGGAAAGAACTGGAAGATGAAGAAACACAGAACTGTTATCTTTCCTCTGATCACACCGATGAGACCATAGATACTGGTGGCATTACAATTCCAGCAGTAgactaa
Protein Sequence: MDETYDTSYLMYLNGKSQNYLLQNSDEILGVHDSNFTPILGENEDGSTAWTVEHIPILMSGTLMPDDQIAQSTENINNNSDTCTSIYNQQSQRESPFSNAEAQEESTIYPLEVPGKGFITAQGLFITNDLLFQLKEKHNSNSQKVVNEDELGQIELVDSNLMESDISQLSGKVRIILDDEDNLSSDNQNSDETHLNFDENVDNQLFEVPNLHEPEEIIQLFNADGTVTNINKSLFNFNVAKNQRVLPDTTEVITEHSGVHYEDFYEVIMAQKCRKCSFLSENKTNMKQHIENIHLTANMSVLNGQHNSGKKTIRINKSPINGEVKMKSILAVNNFRKPDQQTVYLCSECRLGYASTEDLKNHMIKEHKLIGLSDEVKSGPKEESIKDDNTKVVNKMQISAALIRKKQKASKKIKCSIKGCELRFTRDELRARHEECHIEGKKKQFKCSSCDEKFFIWRVCSIHLWKCHSIDTGLLTCPMCNKFKASTPVRLLTHMAIHDDEKPFLCSTCGKTFKQFTQLRNHQVIHETKDKVPEWATQQQCEICEKYFANHKTLKKHIQSVHHQFKPFMCNICGHKTTRKAMLNLHLRQHTGEKPYKCTICTFRTGDHNSLRRHVMRHKGDMKYSCPHCDYKSIQSTAYKNHIANKHPGLGGSYFCVICTYHTVNEIAYLAHMKAHENGSLREKTLNHNRKNETIQHKLDVITGEKEYSEVTNKITSLRKELEDEETQNCYLSSDHTDETIDTGGITIPAVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -