Dcer012372.1
Basic Information
- Insect
- Dascillus cervinus
- Gene Symbol
- Zfy1
- Assembly
- GCA_949768715.1
- Location
- OX458318.1:27111060-27115053[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.59 39 6.1 0.7 1 23 129 152 129 152 0.94 2 10 0.037 2.4 9.9 1.3 2 23 164 186 163 186 0.93 3 10 0.036 2.3 9.9 0.2 1 20 372 391 372 395 0.93 4 10 1.9 1.2e+02 4.5 0.8 1 17 402 419 402 425 0.64 5 10 5.9e-06 0.00039 21.8 1.4 1 23 431 453 431 453 0.98 6 10 4.7e-05 0.0031 19.0 1.2 1 23 462 485 462 485 0.89 7 10 0.00071 0.047 15.3 0.4 1 23 491 513 491 513 0.95 8 10 1.1 75 5.2 3.1 1 23 519 541 519 541 0.97 9 10 0.0011 0.07 14.7 3.8 1 23 547 570 547 570 0.97 10 10 0.027 1.8 10.3 0.7 1 23 579 602 579 602 0.97
Sequence Information
- Coding Sequence
- ATGAAGACGGAGGCCAACGTAACCACTGATACCATTTGGACGACCACAGTGGATATTCCACATTTAACTAACGAGGAATGTCTACCGGTTATTGGCGGTTGTCAAGTATCATCCATCCTATCCAATTTAGATGCATCTGATAAAGTGCTACAAAACAACATAGATTTACCTCAAAATATGGATCTCATAGTCCTGCAAAGTAACGATTTCAAAATCCCCACTCCGGTTGAATTGACTGGTCAGATAACCAACGAATTTTTAGTGTTCAAAGAAAACACAAGCAAACCAACTGAGGACATTGTCTGTGATGCACTagatataaacaaaaaaccaaaaaaatcgaaaaaggaaaaaatcagGGAAGATTTTGAAGACATGTTGTATTTTGTCTGTAATTTATGTCCATACCTGTGCACCAGAGATTCAAAAATCACCGAACACTTAGAGAACgcgcataaaaataaaaccatcAACAAATTGATGCAATTGAAGTGTCCGGCCTGTCCGAatatattttatcataaaGTGTCGTTAAGGTCGCATTTAATCCACGATCATGAAGTCGGAAGTTCTGATCTCAGCAGAATTGTACAAGCGGTGGTGTAtttttctaagaaaaatttgaACAACAGCAATAAATTGAACGAAAACAACAAGGATCAAATCGTATCATTAAACAATTCGGTTATTAGTTGCAAAAacgaaattgatttaaaatacattGAAAAATTGACTCACAGTGAAAAGATAATAAACAATGAAGACAGTTTAACCGACGATTCGCACGATTTGAATTCCACCTTAAGCAGCATGGATGATATCACGCCTAGTCTTGAACCTTTAAATAACATGCCTTTTGAACCTGATGCaccaagtaaaaaaaaaattgaaaaagcaaAAGGCAAGCGCATGCCCGAGATCGTAAACTTGCCTACAATTGACATAATGCACAACGATccacaaaaaatgtttacaaacATAATCAAACAACAAAGTACCTTATCCAAATATTTAgatcaaaaaaatcataaatgcGTCGTATCGATGTGCAAAGTCCGTTTGCaagatatttataaaatgaacTACCACGTAAAGTGCCATGCagaaaatagttttaaatgtttagaATGTAGTGAGGTGTTCTCGTTTTGGAAACCTCTAACCGGCCACTTGTGGAGGATACACAAAATCGACATGGAATTGTATTCTTGTGATAAATGTGATTACAAAACGTTTAGTTTAGGAAAATTGAATAACATTCACAAATTAATTCATAGCGATTTGAAGGCTTTTATTTGTGACGTTTGCCAGAAGGGCTTTAAGAATTCCAAGCAACTCCGCAATCACAGGATCACCCACAAGGAAAAGTCGCTGAAAATGttgcatttttgtgaaatttgtgaGAAGTCCTTTTCTGATAAAAGGCAACTGAGGGTCCACACGGACGGtgttcacaaaaaaatcaagcCATTTTTATGTAGTTACTGTGGATACAAGGGGGCGTCCAAAAGTGCTTTAAAAATGCATGTCAGGCAACACACAGGGGAAAAACCATTCAGTTGCAACTCTTGTATCTATTCAACAGCAGATCACAATTCTTTAAGAAGACACAAATTGAGGCACTCAGGCGAGAAACCGTACAAATGTGCCCATTGTGATTATGCCTGTATCCAGAGCAGCACCTACAAGGTTCATTTAAGGGCCAAACATCCAGGATTAGAAAAGGACTTGATGTTTTCTTGCTCTGAATGCCAGTTTAGAACTATTAATAAGGAGATGTACTTGGCACATCTCACAACGGAACATAGTTTACCTGTGAGTTCACTTCGCACCAAAATGTATTAA
- Protein Sequence
- MKTEANVTTDTIWTTTVDIPHLTNEECLPVIGGCQVSSILSNLDASDKVLQNNIDLPQNMDLIVLQSNDFKIPTPVELTGQITNEFLVFKENTSKPTEDIVCDALDINKKPKKSKKEKIREDFEDMLYFVCNLCPYLCTRDSKITEHLENAHKNKTINKLMQLKCPACPNIFYHKVSLRSHLIHDHEVGSSDLSRIVQAVVYFSKKNLNNSNKLNENNKDQIVSLNNSVISCKNEIDLKYIEKLTHSEKIINNEDSLTDDSHDLNSTLSSMDDITPSLEPLNNMPFEPDAPSKKKIEKAKGKRMPEIVNLPTIDIMHNDPQKMFTNIIKQQSTLSKYLDQKNHKCVVSMCKVRLQDIYKMNYHVKCHAENSFKCLECSEVFSFWKPLTGHLWRIHKIDMELYSCDKCDYKTFSLGKLNNIHKLIHSDLKAFICDVCQKGFKNSKQLRNHRITHKEKSLKMLHFCEICEKSFSDKRQLRVHTDGVHKKIKPFLCSYCGYKGASKSALKMHVRQHTGEKPFSCNSCIYSTADHNSLRRHKLRHSGEKPYKCAHCDYACIQSSTYKVHLRAKHPGLEKDLMFSCSECQFRTINKEMYLAHLTTEHSLPVSSLRTKMY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -