Basic Information

Insect: Dascillus cervinus
Gene Symbol: -
Assembly: GCA_949768715.1
Location: OX458323.1:11964163-11965403[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 1.9e-05 0.0013 20.2 0.5 1 23 205 227 205 227 0.98

2 7 2.3e-05 0.0015 19.9 0.2 1 23 233 255 233 255 0.98

3 7 6.9e-08 4.6e-06 27.9 1.1 1 23 259 281 259 281 0.99

4 7 1.2e-05 0.00081 20.8 0.3 1 23 287 311 287 311 0.96

5 7 1.2e-05 0.00076 20.9 3.0 1 23 317 339 317 339 0.97

6 7 0.00083 0.055 15.0 2.7 1 23 345 367 345 367 0.99

7 7 0.0081 0.53 11.9 0.9 1 21 370 390 370 391 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	1.9e-05	0.0013	20.2	0.5	1	23	205	227	205	227	0.98
2	7	2.3e-05	0.0015	19.9	0.2	1	23	233	255	233	255	0.98
3	7	6.9e-08	4.6e-06	27.9	1.1	1	23	259	281	259	281	0.99
4	7	1.2e-05	0.00081	20.8	0.3	1	23	287	311	287	311	0.96
5	7	1.2e-05	0.00076	20.9	3.0	1	23	317	339	317	339	0.97
6	7	0.00083	0.055	15.0	2.7	1	23	345	367	345	367	0.99
7	7	0.0081	0.53	11.9	0.9	1	21	370	390	370	391	0.96

Sequence Information

Coding Sequence: ATGTTTTGGTCGTCGAATGTCTGCAGAATTTGTGCACAAATTAGCGACCTGTGCATTCAGATTTTCGATAAGAACAGCACGAGagacacaaatttaaaaattaagaaatgccTGGCGCTCgagGTTTCAGAAGGCGATTTCAAGCCGAAACAAATCTGCAACACTTGTTTGGTGAAATTGAACGAGTTCAGCGAATTCctgaaaaattgttacattGCGAACAGGAAATTTGAGTCGCTGTTGTACCAACAAGAACAGAATTCCATTTGGGACGAAAAACCTCACCAAGTGCTTCCAGGCGTACAGGAGATTTTAATCGGCGACGATAATAAGAATTTGGAACCTTTTGAGACCCACTTAGACAATTATTTAGATAATGATTTCGAACAGAAACcgaaatttaatgatttttatcAGAATCAGACTGTTTTGAGGCACTCAGCCGATTATAACAAGCCGTTTAATGATTATACAAGTTCGGTTAAGGCTCAGGCAACAGAAGAAACTGAATTCTCGAAAGGGAAATCAAAATTGACTATAATTTCAATTGAGACCATAAAGCCGGTTGAAGTTTTGGCCGGTGAGGAAGAGAAGGAGAAGAAGGTTAAACCGTTCAGCTGTTCTGTTTGCAGTAAGTCGTTTATGCGGAAATTAACTTTAAATGCGCACATGGCAATACACACAAACGTTCGTCCTTACGTGTGCGCCACTTGCAATAAATCTTTTGCTATGCAGTGGGATTTAACGTCACATGAGAGGGTCCACACTGATTTGTATCGTTGCCAATACTGTTCTAAAAGTTTCAGCGTTCCTAGTAAATTAGAGAGGCACATTAGGATTCACACCGGCGACCGTCCTTTCATTTGCCCGTTAAAAGACTGCAATAGGACCTTCTCAGACAAGAGGAACTTGGTGGCACACAGTATAACGCATTCTGACGaaagaaaatttgtttgtgagatttgtaaaaaatgttacaagACTAATGGACAGTTGAGGGACCATAAAAGGGCCCACAGCAACGACACTCCCTTCAAATGTGATATCTGttcaaaaatgtacaaatggaAGACCAATCTTTTTCTGCACTTGAAGAAACACAATGGCTATAAATGTGCTAATTGTGGGAAGGATTGTGTCAAACTCTCAGTTTTGATTAAACACAGGAAAAACTGTAAAAGTAGGGACAATTga
Protein Sequence: MFWSSNVCRICAQISDLCIQIFDKNSTRDTNLKIKKCLALEVSEGDFKPKQICNTCLVKLNEFSEFLKNCYIANRKFESLLYQQEQNSIWDEKPHQVLPGVQEILIGDDNKNLEPFETHLDNYLDNDFEQKPKFNDFYQNQTVLRHSADYNKPFNDYTSSVKAQATEETEFSKGKSKLTIISIETIKPVEVLAGEEEKEKKVKPFSCSVCSKSFMRKLTLNAHMAIHTNVRPYVCATCNKSFAMQWDLTSHERVHTDLYRCQYCSKSFSVPSKLERHIRIHTGDRPFICPLKDCNRTFSDKRNLVAHSITHSDERKFVCEICKKCYKTNGQLRDHKRAHSNDTPFKCDICSKMYKWKTNLFLHLKKHNGYKCANCGKDCVKLSVLIKHRKNCKSRDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -