Basic Information

Insect: Dascillus cervinus
Gene Symbol: Zfa
Assembly: GCA_949768715.1
Location: OX458322.1:2935976-2937557[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.021 1.4 10.6 2.3 2 23 162 184 161 184 0.96

2 10 0.00012 0.0077 17.7 0.3 1 23 190 212 190 212 0.98

3 10 0.14 9.3 8.0 2.6 1 23 218 241 218 241 0.96

4 10 0.0013 0.083 14.5 1.4 3 23 249 269 247 269 0.91

5 10 7.5e-06 0.00049 21.5 1.3 1 23 278 300 278 300 0.98

6 10 2e-07 1.3e-05 26.4 0.5 1 23 306 328 306 328 0.99

7 10 0.0022 0.15 13.7 0.7 1 23 334 356 334 356 0.90

8 10 7.3e-05 0.0048 18.4 3.3 1 23 362 384 362 384 0.98

9 10 2.6e-05 0.0017 19.8 2.6 1 23 390 412 390 412 0.98

10 10 0.00031 0.021 16.4 5.8 1 23 418 441 418 441 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.021	1.4	10.6	2.3	2	23	162	184	161	184	0.96
2	10	0.00012	0.0077	17.7	0.3	1	23	190	212	190	212	0.98
3	10	0.14	9.3	8.0	2.6	1	23	218	241	218	241	0.96
4	10	0.0013	0.083	14.5	1.4	3	23	249	269	247	269	0.91
5	10	7.5e-06	0.00049	21.5	1.3	1	23	278	300	278	300	0.98
6	10	2e-07	1.3e-05	26.4	0.5	1	23	306	328	306	328	0.99
7	10	0.0022	0.15	13.7	0.7	1	23	334	356	334	356	0.90
8	10	7.3e-05	0.0048	18.4	3.3	1	23	362	384	362	384	0.98
9	10	2.6e-05	0.0017	19.8	2.6	1	23	390	412	390	412	0.98
10	10	0.00031	0.021	16.4	5.8	1	23	418	441	418	441	0.98

Sequence Information

Coding Sequence: ATGGAGGCAAGGTGCCGTTTATGTGCAGAAATTCGTGAAGACTTAATCAATGTGTTAAATGAACCAGAGCtgcttacaaaaattttacatctttttcaaataaaaatttctttacaAGATAGACTGCCAACAACAGTATGCCATGATTGTTGCCTTATAGTAAATAACACTTGGGAATTTAGCGAGCGCGTTCAAAAAGCTCAAGAGATTTTAATCGAATTTGATAGCGATAGAGAAGAATTATTTGCAAATCCACCAAAAAGTCGAGGCTCCACAGATATGGTGGAATGTGTACTTTCAGATACTGATGTAACTGAACCGAACAAACATCCAGCTAAATTAAGTCGGGAGGAGAATATTAAGAAGAAAGAGCCATGTAATTCTGATTCAGATAGTTTATCAGGTGTCAGTGATGCTGAACATCATCCAGACGGCAGTCTCACTCTGCAGAGGCAACTAGAAGGTTGGGAGAGTTATCCATGGACTTGCAGCGATTGTCAGAGATGTATGTCAAATGTTGACGACCTTCGTCAACATCACGCTACAGTGCACGGGCAACCGGTAAAATATGCTTGCGCTGAATGTCCAAAAGTTTATTCAAAGTATAGTACATTTGTAAATCACGTGCGGAGCCACCGTAATCATTTACGTTTTTGCTGTGACGTATGTGGAAAGTGGTTTGGTAAGAGTCGTTCACAGGAGAGACATCGCTTAACAACTCACAGTGATGAACGTCGTCACAATTGCATCACTTGTGGTAAAAGATTTAGAATGCAGTCAGCTTTATTAGTTCATGCACGAAGCCATTTGCCGgccgaattaaaaaataagcacCAATGTGATCAGTGTCCAAAAAGGTTTGGCACAAAGCCGAATTTGATGGCACACAAACGTATTCATTCTGGAGTAAGGGACTATACTTGTGATCAATGTGGAAAAAGTTTTGTGCAAAAGGGCAATCTTGATAATCATCTTTTAACACATACTGCTGCACGTCCATTTATTTGTATCACTTGCGGAAAAGCTTTTAAAACTCAAGTTCGTTTAAGAAAACACAGCTCCGTACATTCTGGTCTGAAACCGCATCAATGTGATGTGTGCGGTCGTCAGTTCAGGGAACGGGGTACCTTAAAAGAACATCATCGAATTCATACGGGTGCAATGCCTTTTACTTGTGAATTTTGTGGGAAATCATTTCGTTTTAAAGGGGTATTAACAACACATCGTCGTCAACATACTGGTGAAAGACCATATTCATGTTTAGAATGTCAGCATCATTTTACAAATTGGCCAAATTACAATAAGCACATGAAAAGAAGACACGGTATTAACACAAGTGTAACTGTAAGGAAACCCCAGACAATTCCACCTACAGGTATGCCTCAACGTAATCCACCAGGAACCGTATTAGCACCTCCTGCAATGCCTGCATCTACCCATGAAAGCTATGCGGAACCACCACCACCGCCATATTACCCCGTCCTTAATTTATATAATCTTCCAGAAGAATTACTTCAACCTCGTATTTAA
Protein Sequence: MEARCRLCAEIREDLINVLNEPELLTKILHLFQIKISLQDRLPTTVCHDCCLIVNNTWEFSERVQKAQEILIEFDSDREELFANPPKSRGSTDMVECVLSDTDVTEPNKHPAKLSREENIKKKEPCNSDSDSLSGVSDAEHHPDGSLTLQRQLEGWESYPWTCSDCQRCMSNVDDLRQHHATVHGQPVKYACAECPKVYSKYSTFVNHVRSHRNHLRFCCDVCGKWFGKSRSQERHRLTTHSDERRHNCITCGKRFRMQSALLVHARSHLPAELKNKHQCDQCPKRFGTKPNLMAHKRIHSGVRDYTCDQCGKSFVQKGNLDNHLLTHTAARPFICITCGKAFKTQVRLRKHSSVHSGLKPHQCDVCGRQFRERGTLKEHHRIHTGAMPFTCEFCGKSFRFKGVLTTHRRQHTGERPYSCLECQHHFTNWPNYNKHMKRRHGINTSVTVRKPQTIPPTGMPQRNPPGTVLAPPAMPASTHESYAEPPPPPYYPVLNLYNLPEELLQPRI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -