Basic Information

Insect: Dascillus cervinus
Gene Symbol: RREB1
Assembly: GCA_949768715.1
Location: OX458318.1:24673349-24680791[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00057 0.038 15.6 1.1 1 23 92 114 92 114 0.98

2 15 0.00097 0.064 14.8 0.2 1 23 127 149 127 149 0.97

3 15 1.2e-05 0.00082 20.8 4.3 1 23 155 177 155 177 0.99

4 15 0.00011 0.0076 17.8 1.3 2 23 277 299 276 299 0.97

5 15 1.4 92 4.9 1.0 1 19 347 365 347 368 0.83

6 15 0.16 10 7.9 0.1 1 23 509 531 509 531 0.96

7 15 3e-05 0.002 19.6 0.6 1 23 540 562 540 562 0.99

8 15 0.0005 0.033 15.7 2.8 1 23 568 591 568 591 0.97

9 15 0.015 0.97 11.1 5.3 1 23 1005 1028 1005 1028 0.96

10 15 0.00086 0.057 15.0 0.3 2 23 1252 1273 1251 1273 0.97

11 15 0.24 16 7.3 6.8 1 23 1279 1302 1279 1302 0.97

12 15 0.54 36 6.2 4.8 1 20 1330 1350 1330 1354 0.93

13 15 2.2 1.5e+02 4.3 1.1 1 23 1412 1435 1412 1435 0.87

14 15 0.026 1.7 10.3 0.4 2 23 1482 1503 1481 1503 0.94

15 15 0.016 1.1 11.0 7.8 1 23 1509 1531 1509 1531 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00057	0.038	15.6	1.1	1	23	92	114	92	114	0.98
2	15	0.00097	0.064	14.8	0.2	1	23	127	149	127	149	0.97
3	15	1.2e-05	0.00082	20.8	4.3	1	23	155	177	155	177	0.99
4	15	0.00011	0.0076	17.8	1.3	2	23	277	299	276	299	0.97
5	15	1.4	92	4.9	1.0	1	19	347	365	347	368	0.83
6	15	0.16	10	7.9	0.1	1	23	509	531	509	531	0.96
7	15	3e-05	0.002	19.6	0.6	1	23	540	562	540	562	0.99
8	15	0.0005	0.033	15.7	2.8	1	23	568	591	568	591	0.97
9	15	0.015	0.97	11.1	5.3	1	23	1005	1028	1005	1028	0.96
10	15	0.00086	0.057	15.0	0.3	2	23	1252	1273	1251	1273	0.97
11	15	0.24	16	7.3	6.8	1	23	1279	1302	1279	1302	0.97
12	15	0.54	36	6.2	4.8	1	20	1330	1350	1330	1354	0.93
13	15	2.2	1.5e+02	4.3	1.1	1	23	1412	1435	1412	1435	0.87
14	15	0.026	1.7	10.3	0.4	2	23	1482	1503	1481	1503	0.94
15	15	0.016	1.1	11.0	7.8	1	23	1509	1531	1509	1531	0.98

Sequence Information

Coding Sequence: ATGCAAGACATCGTCTACGTTGCTGATAATTTACAAACTGGCTCACCACCGCCAAATAAAACTATTGttaccGATGCAAACATGGACACATCCCCAGAACCAAATATTCCGACCAAAGAAGCTCTAACGAACCAAAGTAGCCGAAGCGACTCGGGAATCTTTTCCACCACTGGAAATTCTACGTTCATCCAAGACCATATGAAGCAGTCAAACGCTCATTCTGAAGGAGACGAGAGCGACAATCGCAGCGAATGTAGCTCACCTGACAGAAAATATTACTGTCCGATTTGTGAAACAATCTTGACTTCCCAACACGAATTTACGTTGCATATTCGATCTCATAACAACGAAACTGAATCGCAGGACTCGGAGAAAGGATTTATATGCCGTATTTGCTCTAAAGTTTTGAGTTCCAGTTCGAGTCTAGACCGGCACGTATTGGTTCACAGTGGCGAGCGGCCGTTTACTTGCAAATATTGCGGTGACACGTTTACTACGAATGGTAACATGCACCGACACATGAGAACGCATTCTCACAGAAACGAAAGTTACGAATCTGATGGAAGCACCGACAGCGGCAACAGCACGGGGTCGAAGAATATCGAAtataacaacaacaaaatcGAGCGCGATAAGTGCTACAACTCGCCCAaaagaaaaatggaaaaccaCGAGGAACGCTCTCTTAAACATTCGAGAGCCGAAAGCAGCTCTCCAGATGATGAATCAACCCAAAATTACAAGTGTCCTATTTGCAGCCGCGACGATTTCACTTCCATAAACGCTTTAGATATGCACTTGGACGATAATCACTCCGATTACCCAACAAAATGCAGTCAGTGCAATCAAGTGTTTAACACTAATAAGCTGTTAAACGCTCACCGAAACACGGTTCATGCGTCTGAAGAGAAGATTGTGAAAAGTTCGGTGAACGGTTTTAGGGATTTGACATTCATTGATTTTTCGGCGGCCAAATTTCCGGTCATTGCACGCTTCGAGTGCGAAAAGAATCTTCATAAAGTCACCGGAGGTCTGAAATTTCAATGCAAAAAATGCAGCAGGGCTTTCCCTTGCTCGTTGTCACTCGAGATTCATGAGAAGGACTGTTTGGAATTTTCACGAAGCAGTGACAGCTCTACAGATTTGAACAAAAGTGACAAATTTACTGAAAGTGATCTGCGACGCGCCGATTTCTTCGCGCGGTTAAACCTTCAGAACAACTCGCCTGAAAAGGTTAATCTTTTCCATCAAGCAATGGATGAAGTCCCTACGAAATTGCAGCAACGATTACTGCAAGTGGCCAGTAAAGCATTGGACCCCACTAAGGATTTAGCTGATATTCCGTCAATACTCTCGAATGCGAGCAACGGAAGCCTTCTTCAACAATTGCAGCCCAGAATGAACGAAGTCACCCCGGCCACGCAAATGAACGAAAGTCAGCACGACAACGGAAAAAATGAGAACGAAGAAGAGTCGCAAGATGTTTTTGCGGCTGAATTTcgtaaaatgaaaatgaaggGTGAATTTCCGTGCCGTTTATGCACCGCTGTGTTTCCTAATTTACGTGCATTAAAAGGCCATAATCGTGCTCACTTGAACGGAAATAATAATGGAACCTACAGATGTAATATGTGCCCTCATTCGTCTGCAGACAAAGCAGCTTTAATAAGACACATGAGATCCCACAACGGCGATCGACCTTACGAATGTTCAATTTGTAATTACGCATTCACGACCAAAGCGAACTGTGAGAGACATTTGAGGAACCGTCATGGTAAAACGACCAGAGAGGacgttaaaaaatcaattatctATCATCCGTCTGAAGATCCGAGCAACGACGATCTCACAAAATTAGTGGCACGTGAcgaaactaaaaaattaaactgtaGCCTAAATTCGTCCGCGGAGATCAATGATATTGCCCCGGAAAAAGTGCGTAGCTCCACGCCTAAAGAATACCAAAACATTCCGACCGTTTTACCTGGAGGTAATAGTATTAAAAACACAACCAACTCTCTCTCGCCTACATTGCAAACCTTAAAAGAAACCATGCAAATGAGAATCCCTGACACACACAACTTGAGTAGCATTACCGACATAATCCGCaacgaaaatttgaaatcatTGAAAGACCATAAATCTGCCAGAAACGAACAACGGCTGCATCCGTACTTACAACCCCAATTCaatttcacttcaaaaaacACTATTCCAAAGTTGCCCACAAAAATACAAGTGAAAAGCTTGGACTCCCTCAAACAAATGTCTCCATATGATTATGATGAAAATGATTATTCCAAAGACTCATCGGACGACAAAGATGTTGACGAACCGATGGATCTTGTTCTCGATTTGAGTACGAAGAAAACCAACTCTGAAAATGTCCCTCCTAAAGTTGAAGACAAGCCACAAGATTTGTCGAAGAGAATTTCGGAACGTTTGAGGACGAATGACATTTTGACACAAGAACTTCTCAAGAATACTCCAAAAGTTGAGCCGGCTAACTTATACGCTTCTCAGTTGGCTTTGTATCCTGGCGGTCTCACAGGATGGCCGTTTCCTTTCAATCCAATATTGTTTCAAGGAATGCAAGCTCCAATGCTCGGTCAAGATCCCATGGACTTTAAAGAACGGATGCAAAGATTGCAATTGTGCGGAGGTGGTATGATCATGGACAATTTTGCTGAGCGTCTGAAAAGTTTTCATCAAGCGTCGTTAAACAGCGCCAACATGAATTACTTTAATAACCTGAAAATGAACGAAACGAAGCCAGAAATGACATATCCAGAACCGAATTATAATGCTCCTAATCCGATAACAACGGAAGACATAAAACCTCTTAGTTTAAATATCGACCAAAGTTTCGCTAATAACATGAATAAAATGCACAGTCCCATTACCCAACGAAAATCTGATCTGTTACCATTGCCAAGTGCAGGGAAAATGGTGATAAAAAACGGAGTTCTCATGGCTAAACAAAAACAACGACGTTACAGAACTGAAAGACCATTTTGTTGCGAGCACTGTTCCGCTCGATTTACATTACGATCTAACATGGAGCGGCATATTAAGCAACAGCACCCGCAGTACTGGTCCCAAAGACAGAGATCACACATCGGAAACGTGGGCAGGAAGAATGTAAATAATCCTCCCCCgaccaaaaataattactgtaACATAAATATTCCAAGTTATGACCAACCAAAGCCACAAGACTGCGAGGAGGATACCAAAGAAAGTCAAATATCCGAAAAATTAAAGTACGCTATACTTTCGCAACATTTAAGAAGCGCTTACAACAACTTCAAGTCAGatatgaaattgaaagaagaGGAGGAGGATGGCGATTTGGTGATCGACGAAAAGGACGAAAAGAAGACTGAAAATCACGATAAGCACGACGAGAATGTTAAGGTGCCCAAATCTCGAATATTAGAAGAAAAGTTGAGGCAGATCAATTCTAAACTTAATGATTCCAAATCTTCCAAAAATGAAGAAGCCCAAGACCTTGTTCCAGTAGCCCGGTTGTTGGATAACGCATCTCAGCAGCAATTCAAAGAGTACTTTCGGCGAGGGGAAGAACCGGAACTGGAAGGCGCTAGTGATGAAGAAGAAGGATTTGTCGCCAGTAGCTGTACCAGCGAGGAGAACACTTCAGGAACTGATGAAAATCGaTCCGAATCCGAACATGGTTCAGTTCCGGTTTCAACGAAAAAGAAATCGGCTTATTCCCTTGCCCCGAACCGCGTCAGTTGCCCATATTGCGACCGTAAATTTCCCTGGACCTCGTCTTTGCGCCGTCACGTACTAACTCACACTGGGCAGAAGCCTTTCAAATGCAGCCACTGTCCTTTACTATTCACAACTAAATCGAATTGCGACCGTCACCTTCAACGAAAGCACGGAAATTCAGCCACGACCATTAACAATGATGCAGTAAACAACAATACCAATTACTTGATGCGCAATGTACCAGAACGACCGTTTAAATGTTCCAGTTGCCCTAGCAGCACATTCTCTACTTATTCCAATCTCAAAAAGCATATGAGCTGCAAGCATGCCACCCAGAGTGACGATGGCCGTTCGCGCCATTCGGGCGGTTACGAAGGTGCTAGTTCCGAGGACGAGAAAAATGCACAAACGGATCAAAAACGCGATTGGGAAAATCAAATCAACCAGACGAGAACAGGCGGCAATGAAAACGCACAACCGGCCAATTCAGATTTGCCGTTCAAGTGCCACCTTTGCGACAGCTCGTTCGGCGAACGGCAGGAGAGTCTGGACCATATTAGAGAACAACACCCCACCGAATACGCAGCTTTGATGGAAAAGAACGCCCTGGATTCCAACACCAACGCACCAGACGAAAGTGGCAACCAAGACGACAACGACGACCACGAAGTGCGCGGCAAATTTCCGGATTACGCAAACCGTAAAGTTGTATGCGCCTTCTGTATGCGTCGATTTTGGTCGGCTGAAGATTTAAGACGCCATATGAGAACCCACACCGGAGAGCGTCCGTTTAGTTGTGACATTTGCCATCGACGTTTCACCCTCAAGCACAGCATGTTACGCCATCGCAAAAAGCATAATGTGACCTTTGAACTCGATCATTTAAACAGTGATGAAGACAATAATATCCAAGTACCACCAgcctttgaaaattttatcaagGGAAGCAGCGGGGTGAGTAAATCAGTTGACAAAAATGAAGAATCCGATGGTGTTGAAGGTAGCGATTTGATCAGTAACCTTTTGGGGATCAGGGATCAGTCTCTGATCGATCAAGTACTTACTGGTTCGGCCGATAACGCCGCAAAACTTTTAGGTGTTAAGAGTGGTGTACAGGAATAG
Protein Sequence: MQDIVYVADNLQTGSPPPNKTIVTDANMDTSPEPNIPTKEALTNQSSRSDSGIFSTTGNSTFIQDHMKQSNAHSEGDESDNRSECSSPDRKYYCPICETILTSQHEFTLHIRSHNNETESQDSEKGFICRICSKVLSSSSSLDRHVLVHSGERPFTCKYCGDTFTTNGNMHRHMRTHSHRNESYESDGSTDSGNSTGSKNIEYNNNKIERDKCYNSPKRKMENHEERSLKHSRAESSSPDDESTQNYKCPICSRDDFTSINALDMHLDDNHSDYPTKCSQCNQVFNTNKLLNAHRNTVHASEEKIVKSSVNGFRDLTFIDFSAAKFPVIARFECEKNLHKVTGGLKFQCKKCSRAFPCSLSLEIHEKDCLEFSRSSDSSTDLNKSDKFTESDLRRADFFARLNLQNNSPEKVNLFHQAMDEVPTKLQQRLLQVASKALDPTKDLADIPSILSNASNGSLLQQLQPRMNEVTPATQMNESQHDNGKNENEEESQDVFAAEFRKMKMKGEFPCRLCTAVFPNLRALKGHNRAHLNGNNNGTYRCNMCPHSSADKAALIRHMRSHNGDRPYECSICNYAFTTKANCERHLRNRHGKTTREDVKKSIIYHPSEDPSNDDLTKLVARDETKKLNCSLNSSAEINDIAPEKVRSSTPKEYQNIPTVLPGGNSIKNTTNSLSPTLQTLKETMQMRIPDTHNLSSITDIIRNENLKSLKDHKSARNEQRLHPYLQPQFNFTSKNTIPKLPTKIQVKSLDSLKQMSPYDYDENDYSKDSSDDKDVDEPMDLVLDLSTKKTNSENVPPKVEDKPQDLSKRISERLRTNDILTQELLKNTPKVEPANLYASQLALYPGGLTGWPFPFNPILFQGMQAPMLGQDPMDFKERMQRLQLCGGGMIMDNFAERLKSFHQASLNSANMNYFNNLKMNETKPEMTYPEPNYNAPNPITTEDIKPLSLNIDQSFANNMNKMHSPITQRKSDLLPLPSAGKMVIKNGVLMAKQKQRRYRTERPFCCEHCSARFTLRSNMERHIKQQHPQYWSQRQRSHIGNVGRKNVNNPPPTKNNYCNINIPSYDQPKPQDCEEDTKESQISEKLKYAILSQHLRSAYNNFKSDMKLKEEEEDGDLVIDEKDEKKTENHDKHDENVKVPKSRILEEKLRQINSKLNDSKSSKNEEAQDLVPVARLLDNASQQQFKEYFRRGEEPELEGASDEEEGFVASSCTSEENTSGTDENRSESEHGSVPVSTKKKSAYSLAPNRVSCPYCDRKFPWTSSLRRHVLTHTGQKPFKCSHCPLLFTTKSNCDRHLQRKHGNSATTINNDAVNNNTNYLMRNVPERPFKCSSCPSSTFSTYSNLKKHMSCKHATQSDDGRSRHSGGYEGASSEDEKNAQTDQKRDWENQINQTRTGGNENAQPANSDLPFKCHLCDSSFGERQESLDHIREQHPTEYAALMEKNALDSNTNAPDESGNQDDNDDHEVRGKFPDYANRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICHRRFTLKHSMLRHRKKHNVTFELDHLNSDEDNNIQVPPAFENFIKGSSGVSKSVDKNEESDGVEGSDLISNLLGIRDQSLIDQVLTGSADNAAKLLGVKSGVQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -