Dcer008989.1
Basic Information
- Insect
- Dascillus cervinus
- Gene Symbol
- -
- Assembly
- GCA_949768715.1
- Location
- OX458317.1:35132118-35138547[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 35 0.14 9.2 8.0 0.2 1 23 165 187 165 187 0.94 2 35 0.17 11 7.8 2.3 1 23 234 257 234 257 0.94 3 35 7.7e-05 0.0051 18.3 3.7 1 23 273 296 273 296 0.98 4 35 0.17 11 7.8 0.5 1 23 350 373 350 373 0.96 5 35 0.0036 0.24 13.1 6.4 1 23 385 407 385 408 0.96 6 35 2.7 1.8e+02 4.0 0.2 1 23 462 485 462 485 0.94 7 35 0.022 1.4 10.6 2.6 1 23 501 524 501 524 0.98 8 35 2.3 1.5e+02 4.2 0.2 1 23 578 601 578 601 0.96 9 35 1.5 1e+02 4.8 1.7 3 19 632 648 630 653 0.91 10 35 1 67 5.3 0.2 1 20 662 681 662 685 0.94 11 35 0.0012 0.078 14.6 2.9 1 23 701 723 701 723 0.98 12 35 0.02 1.3 10.7 1.3 1 23 765 787 765 787 0.95 13 35 1.2e-07 8e-06 27.1 1.4 1 23 793 815 793 815 0.97 14 35 0.00056 0.037 15.6 1.9 1 23 821 843 821 843 0.97 15 35 0.00074 0.049 15.2 3.4 1 23 849 871 849 871 0.98 16 35 0.0042 0.27 12.8 0.9 1 23 877 899 877 899 0.96 17 35 4.7 3.1e+02 3.2 0.1 1 23 1048 1070 1048 1070 0.92 18 35 0.6 40 6.0 1.0 1 23 1117 1140 1117 1140 0.94 19 35 0.00079 0.052 15.1 2.4 2 23 1157 1179 1156 1179 0.96 20 35 0.055 3.6 9.3 4.5 1 23 1199 1221 1199 1222 0.95 21 35 1 67 5.3 1.0 1 23 1276 1299 1276 1299 0.96 22 35 0.0018 0.12 14.0 3.2 3 23 1317 1338 1315 1338 0.97 23 35 0.028 1.9 10.2 0.5 1 23 1392 1415 1392 1415 0.96 24 35 0.0093 0.61 11.7 5.7 1 23 1431 1453 1431 1454 0.96 25 35 0.7 46 5.8 0.2 1 23 1508 1531 1508 1531 0.96 26 35 0.036 2.4 9.9 4.3 1 23 1543 1566 1543 1566 0.96 27 35 0.34 23 6.8 0.2 1 23 1620 1643 1620 1643 0.96 28 35 0.93 61 5.5 8.5 1 23 1659 1681 1659 1681 0.99 29 35 0.00044 0.029 15.9 1.4 1 23 1723 1745 1723 1745 0.97 30 35 0.00011 0.0071 17.8 3.1 1 23 1751 1773 1751 1773 0.97 31 35 0.00015 0.01 17.4 2.1 1 23 1779 1801 1779 1801 0.97 32 35 0.00027 0.018 16.6 1.5 1 23 1807 1829 1807 1829 0.98 33 35 0.034 2.2 10.0 4.0 2 23 1836 1857 1835 1857 0.95 34 35 1.5e-05 0.00098 20.6 2.8 2 23 1864 1885 1863 1885 0.97 35 35 0.027 1.8 10.3 6.9 1 23 1890 1913 1890 1913 0.91
Sequence Information
- Coding Sequence
- aTGGACAATACAAACTCACAGAAATGCCGATCATGCCTTGCACAAAGTTGCACACTGAAACCACTTTCGGTGCTTAGTAAAGCAAGTGGGAATGTACTTCAAATATCTGATCTATTTATGATGTGTGCTGCAATACAGATTGCGCCCAATGATGGATTTTCACAGTATGCTTGCATAAAATGTATAAACTCAGCCGAGAAGGCGTATCTCTTCAAGAAACAATGTGAATACAGTGACAAAGTTTGGAATGAATTTAACAAGCAATTACAAAAGGACACCATATCGACTTTAGTTGAAGGTTTAACTAGTAATGCTAATGCAGAGATTACTGTACCAATTCCAACACTTGTTAAAATTGAATGTGAAGCAGATGAGTATCAAGTGGACAATGATCCAATGACCGAAACAGGATCCGTTGAAATTGATTATGAAATGGACAATGATTTAGATATTAAGTCAATTGAAATTCACGAAGAACCTAAAACTGAAAACTTTACTTGCAAATACtgtttgacaatttttgttgATGAAGCAAAGCTCTTGATGCATGAACTCGCCCATACAATCGAATCTGAAGAATTAGCTGTAAAAAAGTATGTAATTTATCGTTGTCAGGAATGTTCTGTTGATTGCAAAACAGCAGAAGAATTCATAGAACATTGTTACGAATTGCATGAAAATTCCATTGAAACGCTTTATTATCGTTGCAAATTATGTGCAGAAGATTTTGCTCacctttcaaaatttacaacacaTGTTTCAAACAGACATAATACATTGCATTCTCCTCAATTAACTAACGTTTCAAAACCGAAATTTGAGTGCCAAGTGTGtcacaatgaatttaaaaatcgtgATTCGTTGCGGCGCCACATGAAGAAACTCCATGGtgcaaaattgataaaatctCCAATCGAACCTAAAGAATTGACCGTAAAAAAGTATGTGATTTATGGTTGTCGGGGATGTTCTGTTGATTGTCAAACAGCAAAAGAATTCATGGAACATTGTCACAAATTGCATGAAAATTCCGTTGAGAAGCTTTATTATCGTTGTAAATTATGTGCAGGAGATTTTGATAATCTTTCACAATTTACAACACATGTTTCAAAAGGCCATTCCCCACACCTAACTaacgtttcaaaaaataactttgaGTGCCAATTGTGTCacaatgaatataaaaatcGTAATTCGTTGCGGCGCCACATACGGAAACACCATGGCGTACAATTGCCAAAATATCCAATCGAACCTAAAGACTTGGCAGTAAAAAAGCATGTGATTTATGGTTGTCAGGAATGTTCTGTTGTTGTTCAAACAGCAGAAGAATTCATGGAACATTGTCACAAATTACATGAAAACTCCGTTGAGAAGCTTTATTATCGTTGCAAATTATGTGCAGGAGATTTTGCTAATCTTCCAAAATTTACAGCACATGTTTTAAACAggcataaatcattacattccCTTCAATTGACTAACGTTTCAAAAAAGGAATTTGAGTGCCAAGTGTGTCACAATGAATATGAACTACGTAATTCGTTGCGGCGCCACATACGGAAGCAACATGGTGGACAATTGCCAAAATCTCGAATCGAACCTAAAGAATTGGCTGtaaaaaactatgcaatttATGGTTGTCGTGAATGTTCTGTTGATTGTCAAACAGCAGAAGAATTCATGAAACATTGTCACAAATTGCATGAAAACTCCATTGAAAAGCTTTATTATCGTTGCAAATTATGTGCAGGAGATTTTGCTAATCTTCCCCAATTTGCAACACATGTCTCAAAAAGACATTCCCACATACAGAAACACCATGGTGGAGAATTGCCAAACTCTCCAGTCGAACCTAAAGAATTGGCTGTAAAAAAGTATGTGATTTATGGTTGTAAGGaatgttctgttgattttaaAACATCTGAAGAATTTATGCAACATTGTCTCAATTtgcatgaaaattttattgagaAGCTTTATTATCGTTGCAAATTATGTGCAGGAGATTTTCCTGATCTTTCACAATTTACAGCACATGTTCCAAAAAGCCATAAAGCAATATATTCCCCTCACTTAACGAACGTTTCAAAAAAGGAATTTAAGTGCCAAGTGTGtcacaatgaatttaaaactcGTGATTCGTTGCGGGGCCACATATTAAAACATCCTGGCGCACAATTGCCAAAATCTAGAGCTTGGCCTCAATCATGCAAATATTGCACATTTATATTGGAATCCCTAAAGGATAAATTGACACATCTCAATCAGGAACATAGTGATTTAAAAATCTTTACTTGctataaatgtgaaaaaacgttttttgaagaaaagcAATTGAAGTTACATGTTGGAATCCATGACATAGTTAAGAGGCACATCTGCCAATATTGTGGAAAGAGTTTTGCACGCTCCTCAAATTTATTTGTGCACATACGGATCCACACTGGCGAGAAGCCATTCAAGTGTGATAAATGCGATGCATGTTTTGCACAATGGACCTCCCTTTATGctcataaattaaatcatgtcaaagagaaaaattttgaatgcaaaAAATGCCACAAGCGGTTTTTGAGGCCTGGAACCTTAAGAACACACATGGTGACACATACTGCTAGCCCGAAATATCCGTGTCATTTGTGTCCAAAACAACTTAAAAGTTCCATATTGTTGAGAAGACACGTTTCTCTTCATTCTTGTGAGGATTACTGTGTTTGGTTTAGTAAAGCAAGTGAGAATGCACTTCACTTGTCCGATGTATTTATGATGTGTGCTACAATACAGATTGCGCCCAACGATGGATTTTCACAATATGCTTGCATACACTGTATTAACTCAGCCGAGAAGGCGTATCTTTTCAAGAAACAATGTGAACACAGTGATAAAATATGGAATGAATTTAAACGGCGATTACAAAAGGACTCTATATCGAATTTAGTTGAAGTTTTACCTATTAATGATCATGCAGAGATTATTGTACCAATTTCAACACCTGTAAAAAATGAATGTGAAGCAGATGAGTATCAAGTGGACAATGATCCAATGACCGAAACAGGATCTGTTGAAATTGATTATGAAATGGACAATGATTTAGATATTAAGTCAATTGAAATTCACGAAGAAcctaaaactgaaaattttacttgCAAATACTGTTTGACAATTTTGGTTGATGAAGCAAAACTTTTGATGCATGAGCTTGCTCATACAATAGAACCTAAAGAGTTAGCTGTAAAGAAGTATGTGATTTATGATTGTCAGGAATGTTCTGTTGATGTTAAAACAGCAGAAGAATTCATAGAGCATTGTCACAAATTGCATGAAAATTCCATTGAGAAGCTTTATTATCGTTGCAAATTATGTGCAGGAGATTTTGATCACCTTTCAGAATTTACAGCACATGTTTCAAACAGACATAAAACATCACATTCTCCTCAATTAACTAACGTTTCAAAAAACGAATTGGAGTGCCAAGTGTGTCACAATGAATATAAGAATCGTGATTCGTTGCGGCGCCACATGCAGAAACTTCATGGtgcaaaattgataaaatctCCAATCGAACCTAAAGAATTGactgtacaaaataaatttgagtGCCAAGTGTgtcacaataaatataaaatacgtGATTCGTTGCGGCGCCACATAGTGAGACACCATGGTGGGAAATTGCCAAAATCTCCAATTGAACCTCAAGAATTggctgtaaaaaaatatgtgattTATGGTTGCCGTGAATGCTCAGTTGATTGCAAAACATCAGAAGAATTCATGGAACATTGTCACAAATTGCATGAAAACTCCACTGAGAAGCTTTATTATCGTTGCAAATTATGTGCAGGAAATTTTGTTcatatttcagaatttataaCACATGTTTCAAGCAGGCACAAAACATTATATTCCCCTCAATTGACTAACGTCTCAAAAAAGGAATTTGGGTGCCAAGTGTgtcacaataaatataaaaatagtgATTCGTTGCGGCGCCACATGCAGAGACTCCATAGAGCAAAATTGCCAAAATCTCCAATCGAACCTAAAGAATTGGCTGTAAAAAAGTATGTAATTTATGGTTGTCGTGAATGTTCTGTTGTTGTTAAGACAGCACAAGAATTCATCGAGCATTGTCACAAATTGCATGAAAATTCCATTGAGAAGCTTTATTATCGTTGCAAATTATGTGCAAGAGATTTTGCTAATCTGCCACAATTTACAGCACATGTTTCAAAAAGGCATAATGCAATACGTTCTCCTCACTTAACTAACGTTTCAAAAAAGGAATTTGAGTGTCAAGTGTgtcacaataaatataaactaCGTGATTCGTTGCGGCGCCACATACGGAATCACCATGGTCAACAATTGCCAAAATCTCCAATTGAGCCTAAAGAATTGGCTGTAAAAAAGTATGTAATTTATGGTTGTCGTGAATGTTCTGTTGATTGCAAAACAACAGAAGAATTCATGAAACATTGTCAAAAATTGCATGAAAATTCCATTGAGAAGCTTTATTATCGTTGCAAATTATGTGCAGGAGATTTTGCTAATCTTCCACAATTTACAGCACATGTCTCAAAAAGACATGCTCCACACTTAACTAACGTTTCAAATGAGAAATTTAAGTGCCACGTGTGTCacaatgaatataaaataCGTGATTCGTTGCGTCGCCACATAGTGAGAAACCATGGTGGGAAATTGCCAAAATCTCCAATTGAACCAAAAGAATTGGCTGTAAAAAAGTATGTGATTTATGGTTGTCAGGAATGTTCTGTTGATGTTAAAACCGCTGAAGAAATTATGGTACATTGCCACAAATTGCACGAACATTCTACTGAGAAGCTTTATTATCGTTGCAAATTATGTGCAGGAGATTTTCCTAATCTTGCACAATTTACGGCACATGTTTCAAAAAGACACAAAGCAATATATTCCCCTCACTTAGCAAACGTTTCAAAAAAGGAATTTAAGTGCCAAGTGTGTCACAATGAATATAAAACTCGTGATTCGTTTCGGTGCCACATGCGAAAACATCCTGGCGCACAATTGCCaaaatctggagcttggcccCAACCATGCAAGTATTGTTCATTTCCATTGGAATCCTACAAGGATAAATTGACACATCTCAATCAGGAACACAGTGATTTAAAAATCTTTACTTGCTATAAATGCgacaaaacgttttttcaAGAACTGAATTTGAAGCAACATATTGGAATCCACGACAAAGTTAAGAAGCACATGTGCCAGTATTGTGGAAGGAGTTTTGCATGCTCCTCAAATTTAAATGTTCACATCCGGATCCACACCGGTGAAAAGCCATTCAAGTGCGATAAATGCGATAGATGTTTCGCACAATGGACGGCTCTTTATGCTCATAAATTGAATCatgtcaaagaaaaaaattttgaatgcaaaGAATGCCACAAGCGGTTTTTGAAGCCTGGAACGTTAAGAGCACACATGGCGACACACACTGCAGGCCCGAAATGTCCGTGTCATTTGTGTCCAAAACAACTTAAAAGTTACAAGTTGTTGAGAAGACACCTTTCGATTCATTCTGGTGAAAAGTATTGTGTTTGTAAAGTGTGCGGAAAGGGATTCAATTCTAGGAACAACTTAAGGCAACACGAAAGAACACATGGAGAGAAACGGCATATTTGTACAATTTGTAACAAGCGATTCAGTCAGGCACACTGTTTGCGTTCACATAATGCTAAGTTTCACATTGATGAACCTTCGTAA
- Protein Sequence
- MDNTNSQKCRSCLAQSCTLKPLSVLSKASGNVLQISDLFMMCAAIQIAPNDGFSQYACIKCINSAEKAYLFKKQCEYSDKVWNEFNKQLQKDTISTLVEGLTSNANAEITVPIPTLVKIECEADEYQVDNDPMTETGSVEIDYEMDNDLDIKSIEIHEEPKTENFTCKYCLTIFVDEAKLLMHELAHTIESEELAVKKYVIYRCQECSVDCKTAEEFIEHCYELHENSIETLYYRCKLCAEDFAHLSKFTTHVSNRHNTLHSPQLTNVSKPKFECQVCHNEFKNRDSLRRHMKKLHGAKLIKSPIEPKELTVKKYVIYGCRGCSVDCQTAKEFMEHCHKLHENSVEKLYYRCKLCAGDFDNLSQFTTHVSKGHSPHLTNVSKNNFECQLCHNEYKNRNSLRRHIRKHHGVQLPKYPIEPKDLAVKKHVIYGCQECSVVVQTAEEFMEHCHKLHENSVEKLYYRCKLCAGDFANLPKFTAHVLNRHKSLHSLQLTNVSKKEFECQVCHNEYELRNSLRRHIRKQHGGQLPKSRIEPKELAVKNYAIYGCRECSVDCQTAEEFMKHCHKLHENSIEKLYYRCKLCAGDFANLPQFATHVSKRHSHIQKHHGGELPNSPVEPKELAVKKYVIYGCKECSVDFKTSEEFMQHCLNLHENFIEKLYYRCKLCAGDFPDLSQFTAHVPKSHKAIYSPHLTNVSKKEFKCQVCHNEFKTRDSLRGHILKHPGAQLPKSRAWPQSCKYCTFILESLKDKLTHLNQEHSDLKIFTCYKCEKTFFEEKQLKLHVGIHDIVKRHICQYCGKSFARSSNLFVHIRIHTGEKPFKCDKCDACFAQWTSLYAHKLNHVKEKNFECKKCHKRFLRPGTLRTHMVTHTASPKYPCHLCPKQLKSSILLRRHVSLHSCEDYCVWFSKASENALHLSDVFMMCATIQIAPNDGFSQYACIHCINSAEKAYLFKKQCEHSDKIWNEFKRRLQKDSISNLVEVLPINDHAEIIVPISTPVKNECEADEYQVDNDPMTETGSVEIDYEMDNDLDIKSIEIHEEPKTENFTCKYCLTILVDEAKLLMHELAHTIEPKELAVKKYVIYDCQECSVDVKTAEEFIEHCHKLHENSIEKLYYRCKLCAGDFDHLSEFTAHVSNRHKTSHSPQLTNVSKNELECQVCHNEYKNRDSLRRHMQKLHGAKLIKSPIEPKELTVQNKFECQVCHNKYKIRDSLRRHIVRHHGGKLPKSPIEPQELAVKKYVIYGCRECSVDCKTSEEFMEHCHKLHENSTEKLYYRCKLCAGNFVHISEFITHVSSRHKTLYSPQLTNVSKKEFGCQVCHNKYKNSDSLRRHMQRLHRAKLPKSPIEPKELAVKKYVIYGCRECSVVVKTAQEFIEHCHKLHENSIEKLYYRCKLCARDFANLPQFTAHVSKRHNAIRSPHLTNVSKKEFECQVCHNKYKLRDSLRRHIRNHHGQQLPKSPIEPKELAVKKYVIYGCRECSVDCKTTEEFMKHCQKLHENSIEKLYYRCKLCAGDFANLPQFTAHVSKRHAPHLTNVSNEKFKCHVCHNEYKIRDSLRRHIVRNHGGKLPKSPIEPKELAVKKYVIYGCQECSVDVKTAEEIMVHCHKLHEHSTEKLYYRCKLCAGDFPNLAQFTAHVSKRHKAIYSPHLANVSKKEFKCQVCHNEYKTRDSFRCHMRKHPGAQLPKSGAWPQPCKYCSFPLESYKDKLTHLNQEHSDLKIFTCYKCDKTFFQELNLKQHIGIHDKVKKHMCQYCGRSFACSSNLNVHIRIHTGEKPFKCDKCDRCFAQWTALYAHKLNHVKEKNFECKECHKRFLKPGTLRAHMATHTAGPKCPCHLCPKQLKSYKLLRRHLSIHSGEKYCVCKVCGKGFNSRNNLRQHERTHGEKRHICTICNKRFSQAHCLRSHNAKFHIDEPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -