Basic Information

Insect: Dascillus cervinus
Gene Symbol: -
Assembly: GCA_949768715.1
Location: OX458317.1:35064403-35070097[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0014 0.09 14.4 0.9 1 23 143 165 143 165 0.95

2 16 0.89 59 5.5 2.8 1 23 211 234 211 235 0.94

3 16 6e-06 0.00039 21.8 2.6 1 23 249 271 249 271 0.97

4 16 0.02 1.3 10.7 2.4 1 19 277 295 277 297 0.95

5 16 0.79 52 5.7 0.1 2 23 304 326 303 326 0.94

6 16 1.6 1.1e+02 4.7 1.0 2 23 337 359 336 360 0.93

7 16 7.1e-06 0.00047 21.5 1.5 1 23 361 383 361 383 0.97

8 16 3.1e-06 0.0002 22.7 1.5 1 23 395 417 395 417 0.99

9 16 0.72 48 5.8 1.2 2 23 437 459 436 459 0.93

10 16 4.3e-05 0.0028 19.1 6.1 1 23 465 487 465 487 0.98

11 16 0.00056 0.037 15.6 2.8 1 23 493 515 493 515 0.97

12 16 7.1e-05 0.0047 18.4 0.8 1 23 521 543 521 543 0.96

13 16 3.9e-06 0.00026 22.4 2.0 1 23 549 571 549 571 0.99

14 16 0.001 0.066 14.8 1.2 1 23 577 599 577 599 0.98

15 16 3.9e-05 0.0026 19.2 0.1 1 22 605 626 605 626 0.97

16 16 0.096 6.3 8.6 2.3 1 23 633 656 633 656 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0014	0.09	14.4	0.9	1	23	143	165	143	165	0.95
2	16	0.89	59	5.5	2.8	1	23	211	234	211	235	0.94
3	16	6e-06	0.00039	21.8	2.6	1	23	249	271	249	271	0.97
4	16	0.02	1.3	10.7	2.4	1	19	277	295	277	297	0.95
5	16	0.79	52	5.7	0.1	2	23	304	326	303	326	0.94
6	16	1.6	1.1e+02	4.7	1.0	2	23	337	359	336	360	0.93
7	16	7.1e-06	0.00047	21.5	1.5	1	23	361	383	361	383	0.97
8	16	3.1e-06	0.0002	22.7	1.5	1	23	395	417	395	417	0.99
9	16	0.72	48	5.8	1.2	2	23	437	459	436	459	0.93
10	16	4.3e-05	0.0028	19.1	6.1	1	23	465	487	465	487	0.98
11	16	0.00056	0.037	15.6	2.8	1	23	493	515	493	515	0.97
12	16	7.1e-05	0.0047	18.4	0.8	1	23	521	543	521	543	0.96
13	16	3.9e-06	0.00026	22.4	2.0	1	23	549	571	549	571	0.99
14	16	0.001	0.066	14.8	1.2	1	23	577	599	577	599	0.98
15	16	3.9e-05	0.0026	19.2	0.1	1	22	605	626	605	626	0.97
16	16	0.096	6.3	8.6	2.3	1	23	633	656	633	656	0.95

Sequence Information

Coding Sequence: atgGTAAGTGGGTGCCGTGCGTGCCTTGCACAGTCTGGCAAAGTGATACCACTTTCGGAGCCTAGTAAAGCAAGTGAGAATAAACTTCAGATGTCCGATATATTTATGATGTGTGCTTCCATACAGATTGCACCCAATGATGGATTTTCGCAATATGTTTGTTCGAAATGTGTCGAATCAGCGGAAAAAGCGTATCTCTTTCGAAAGCAATGTGAATACAgcgataaatatttaaaagaattcagAGAATCGCTAGAAAAGGAAACAACATTGATACCTTTACCAAATTTAACTGCTGGAAAAGATGAGTGCCAAGTGAACAACAATCCAGAAATTACTGAAACGAGATCTGTCGAAATTCATAATGAAGCGAACAATGATCCAGATGTAAAGTCCATTGAAATACACGAAGTTAAAATTGAAAGCTTCACTTGCAAATATTGTTCGACAATTTTTGTTGatcaagaaaaatttttaaggCACGAACTTGCTCATGCAATGGAACCTACAAAATCAGTAAAACAATATGTAATGCATGGTTGTCGGGCATGTTACGTTGATTTTAAAACGCCTGCAGCCTTCTTGGGACATTGCCACAAATTTCATGCAAACTCCATTGAAGGGCTTCATTACCATTGCAGATTTTGTGTGGGAgattttgctaatttaacccaACTCACAAAACATGTTTTAATAAGGCATCACAAGAAGTTAAGAGTCGTTCCATTTGTGCCACATAAAAGATTCATGTGCCAGTATTgtggaaaatgttttaaaggtctcaaacaattgCAGGACCATATTCGTGGCCACACCGGTGAAAAGCCGTTCAAGTGTGACAAATGTAATGCATGCTTTTCACAAGAGTCAATATTGCGTAAGCATAAAGATTGTCACGCTTCAGAAAAGAGTTGCAAGTCGTGCGCAGGAAATTTTGCTGATCTCGACGAACTTGCAACACACGTTTCAACAAGACATAACAAGACAAGACAAGACGCTTGGCCCCAGCCGTGTAATTATTGCAAACTGTCTTTGAATTCCCTTGAGGAAAAAATTATGCATCTCAAACAGGATCATCACTTCAGCTGCGACGAATGCGGCAAAGCGTACTTCAGAAAGGATCACTTGAGACTGCACGTGAGGGGGCACAGTCAGGCTGCGAGGCAGGCGCCGGAAAACAGGTTTCAGTGCAAGAAGTGCCCGAAAAGGTTGAAAACGCTCGATTCGTTGCGTGCTCACATTCGGAGGCACGGCGGCGACCCAAAGCCCGAATTGTCGCAGCTATCGCTGAAATTGAATTGGCCCCAACCGTGCGATTATTGCGGCCTGCCGTTGAAGTCTTTCAATGAAAAAAGAAGACATCACGATCGGGAACACGGTGATTTGAAAGATTTCAAATGCGAACAATGTGGAAAAGGATTCTTTCACAAGTATCTGCTGAAACATCACTTGAAAATTCACGAGACGGTTAAGAGACACATGTGTCAGTACTGCGGGACCGGTTTTAAATGTCCCTCGAATTTGAGTGTGCACATACGGCTCCACACCGGTGAGAAGCCTTACAAGTGCGACAAATGCGATGCACGTTTTACACAGTGGTCTTCATGGAACTCTCATCGAGTGAATCATgtggaagaaaaaaattttcagtgtAACAAATGCCTCAAAAGGTTTAAAGTGGCTAGTGTTTTAAATCGTCACATGCGCACACATACTGGATACAAAAAATATCCTTGCCATCTGTGTCCAAGAAGACATGCAGATCCCAGCAGTTTGAAGAGACACCTTTTGATCCATTCGGATGCGCGTCCTTATGAGTGTGAAGTGTGCGCGAAAGGATTTAACAGCCCCAAAAACTTGAAGTTGCACATGATGACGCGCACCGGAGAGAGACCACATGTTTGTGCAATTTGTAGAAAGGGATTCATTCAGGTTAATTGTTTGCGTTTGCACACTGCTCGGTATCACAAGCGTGATCTTGCTCAAACAATTTCGTAG
Protein Sequence: MVSGCRACLAQSGKVIPLSEPSKASENKLQMSDIFMMCASIQIAPNDGFSQYVCSKCVESAEKAYLFRKQCEYSDKYLKEFRESLEKETTLIPLPNLTAGKDECQVNNNPEITETRSVEIHNEANNDPDVKSIEIHEVKIESFTCKYCSTIFVDQEKFLRHELAHAMEPTKSVKQYVMHGCRACYVDFKTPAAFLGHCHKFHANSIEGLHYHCRFCVGDFANLTQLTKHVLIRHHKKLRVVPFVPHKRFMCQYCGKCFKGLKQLQDHIRGHTGEKPFKCDKCNACFSQESILRKHKDCHASEKSCKSCAGNFADLDELATHVSTRHNKTRQDAWPQPCNYCKLSLNSLEEKIMHLKQDHHFSCDECGKAYFRKDHLRLHVRGHSQAARQAPENRFQCKKCPKRLKTLDSLRAHIRRHGGDPKPELSQLSLKLNWPQPCDYCGLPLKSFNEKRRHHDREHGDLKDFKCEQCGKGFFHKYLLKHHLKIHETVKRHMCQYCGTGFKCPSNLSVHIRLHTGEKPYKCDKCDARFTQWSSWNSHRVNHVEEKNFQCNKCLKRFKVASVLNRHMRTHTGYKKYPCHLCPRRHADPSSLKRHLLIHSDARPYECEVCAKGFNSPKNLKLHMMTRTGERPHVCAICRKGFIQVNCLRLHTARYHKRDLAQTIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -