Basic Information

Insect: Dascillus cervinus
Gene Symbol: -
Assembly: GCA_949768715.1
Location: OX458319.1:12218610-12225518[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.017 1.1 11.0 1.8 1 22 195 216 195 219 0.92

2 11 6.9e-05 0.0046 18.4 3.3 1 23 225 246 225 246 0.97

3 11 2.9e-08 1.9e-06 29.1 0.8 1 23 252 274 252 274 0.99

4 11 6.8e-06 0.00045 21.6 1.2 1 23 280 302 280 302 0.98

5 11 1.7e-05 0.0011 20.3 2.3 1 23 317 339 317 339 0.97

6 11 0.00062 0.041 15.4 5.5 3 23 360 380 358 380 0.96

7 11 3.6e-06 0.00023 22.5 0.1 1 23 385 407 385 407 0.95

8 11 3.2e-05 0.0021 19.5 2.0 1 23 413 435 413 435 0.97

9 11 6.6e-06 0.00043 21.7 7.1 1 23 441 463 441 463 0.98

10 11 5.6e-07 3.7e-05 25.0 0.6 1 23 469 491 469 491 0.99

11 11 1.8e-06 0.00012 23.5 0.5 1 23 497 519 497 519 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.017	1.1	11.0	1.8	1	22	195	216	195	219	0.92
2	11	6.9e-05	0.0046	18.4	3.3	1	23	225	246	225	246	0.97
3	11	2.9e-08	1.9e-06	29.1	0.8	1	23	252	274	252	274	0.99
4	11	6.8e-06	0.00045	21.6	1.2	1	23	280	302	280	302	0.98
5	11	1.7e-05	0.0011	20.3	2.3	1	23	317	339	317	339	0.97
6	11	0.00062	0.041	15.4	5.5	3	23	360	380	358	380	0.96
7	11	3.6e-06	0.00023	22.5	0.1	1	23	385	407	385	407	0.95
8	11	3.2e-05	0.0021	19.5	2.0	1	23	413	435	413	435	0.97
9	11	6.6e-06	0.00043	21.7	7.1	1	23	441	463	441	463	0.98
10	11	5.6e-07	3.7e-05	25.0	0.6	1	23	469	491	469	491	0.99
11	11	1.8e-06	0.00012	23.5	0.5	1	23	497	519	497	519	0.96

Sequence Information

Coding Sequence: ATGGATGAAGATTGCGATGAAATGGTGGAGTATTGTACTCCACCCGAAGTTAGCGATGCAGTCAAAGTGGTCACCATGAATTTGTTACCAAaaATTGGTCAAGCCCATAATTATGAGCCTGGAAATGTTTCAAATAACCAATTAAGTGTAgacgaatttaagaaaatttgtagaGCATGCCTCACTGAAGGAGATATTAAACCCATATTTGGACTCAATTATGAAGAAATGAGAATCTCTGAACTTTTACACAAATGTGCTTCTGTACAGATACACGAAGATGATGATCTGCCACAGAATATCTGTACGCACTGTATAAATGACTTGGTGCGTTGGCATACGTTTCGACAAAAATGCAATCAATCGGAAGATACGCTTCGTGCTATTCTCAATAAAACACAAGATAAGAATATTCACAATGGAATAAAAGATGAAAAGGAGAACTTTGTCGACCCTAATGATGACGATGACAGTGATGaagattatgaaataaaaccaaaagtCCGCCAGTTACCAAAATTAAGAGTGAAACGGCGAAAATTACTTAGACGCAAAAAGATCGTAAAGAAACAAGGCCCACCATTCAAATGTAGAGACTGCAATGTTGTATGTGATGATTTTGAATCTTTGAAAGATCATCGACGAGAAGCGAAACATCCAGAAGCTCGGAACCACACTTGTTCGATTTGTTCCAAAATGTTTACAAGCAGCAAACTCCGTCAACATATGAGAGCACACACAAAAGAAAAACCGtacaaatgtaaaatttgtgGGCAAGGTTTCAGCATGAGCGGTAACCTAAAAAGGCACATGATGACACATACAGGTGAAAGGCCACATGTGTGTGAAGTTTGTGGAAAagGTTTCATTCAGCTGACAACATTACAAAATCACCGTAAAACACACGCTCCAAATGAACGATTAGGACACAATGGTAACAGTTCAAGTTTCGCCTGTAATTATTGCGGCAGGGGTTTTAAACGCCTAGCATGTTACAATGCACACTTACGAAGACATTTCAACGAAAATGATGAATTGAAAAAGCCGACCTTGAAGGAGGAGATAAGGGAACATCTCTGTGACATTTGCAAACGTTCTTACAAAACGAAACATCTTTTAAAAGCGCATAAGTTGACTCACGGTGAAAAAGCATTTTTGTGTAGTGAATGCGGTAAAGGTTTTGTGACAAAAGCAGCTCTACagtcacatttaaaaatacacacgGGTGAGAAACCGCATACTTGTAccatttgtaaaaaatcatttgcaCATGTCGGTAGTTTTGAAGCGCATATGTTGATTCATACTGGACAAAAACCGTACCATTGTAACGTATGCACAAAGTCGTTTACGCAACTTTCACATTTGAAATACCATTTACGTACCCATAGTGGGGAAAGACCATATTCGTGTTCATTTTGTGGCAAGAGTTTTGCTTTGAAGGGAAATTTGACAGTTCATGTTAGAACGCATACTGGCGAAACGCCTTACTTGTGTCCTATTTGTGGAAAAGGATTTTATGATTCGAGCAGTATGAAGAAGCACAGAAGAGGTCATGGTGAAGAATCCAACGCACAACCTGCTGCTACCACtttgattattaataatatgatGATGCTGTAA
Protein Sequence: MDEDCDEMVEYCTPPEVSDAVKVVTMNLLPKIGQAHNYEPGNVSNNQLSVDEFKKICRACLTEGDIKPIFGLNYEEMRISELLHKCASVQIHEDDDLPQNICTHCINDLVRWHTFRQKCNQSEDTLRAILNKTQDKNIHNGIKDEKENFVDPNDDDDSDEDYEIKPKVRQLPKLRVKRRKLLRRKKIVKKQGPPFKCRDCNVVCDDFESLKDHRREAKHPEARNHTCSICSKMFTSSKLRQHMRAHTKEKPYKCKICGQGFSMSGNLKRHMMTHTGERPHVCEVCGKGFIQLTTLQNHRKTHAPNERLGHNGNSSSFACNYCGRGFKRLACYNAHLRRHFNENDELKKPTLKEEIREHLCDICKRSYKTKHLLKAHKLTHGEKAFLCSECGKGFVTKAALQSHLKIHTGEKPHTCTICKKSFAHVGSFEAHMLIHTGQKPYHCNVCTKSFTQLSHLKYHLRTHSGERPYSCSFCGKSFALKGNLTVHVRTHTGETPYLCPICGKGFYDSSSMKKHRRGHGEESNAQPAATTLIINNMMML

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -