Basic Information

Insect: Dascillus cervinus
Gene Symbol: -
Assembly: GCA_949768715.1
Location: OX458317.1:30023129-30027102[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.14 9 8.1 2.6 1 23 23 46 23 46 0.92

2 17 5.4 3.6e+02 3.0 1.8 3 11 57 65 55 78 0.79

3 17 0.00048 0.032 15.8 1.8 2 23 84 105 84 105 0.98

4 17 0.00013 0.0085 17.6 0.8 2 23 113 134 112 134 0.97

5 17 1.6e-05 0.0011 20.4 0.6 1 23 139 161 139 161 0.97

6 17 0.00019 0.012 17.1 1.5 2 23 168 189 168 189 0.92

7 17 2.7e-07 1.8e-05 26.0 0.4 1 21 195 215 195 216 0.95

8 17 0.0038 0.25 13.0 2.3 1 23 238 261 238 261 0.96

9 17 0.012 0.77 11.4 0.8 1 23 266 289 266 289 0.93

10 17 0.44 29 6.5 0.2 1 15 293 306 293 314 0.71

11 17 4.8 3.1e+02 3.2 3.2 2 15 321 334 320 343 0.79

12 17 8.7e-06 0.00057 21.3 0.1 1 23 348 370 348 370 0.98

13 17 1.5e-05 0.00097 20.6 3.9 1 23 377 399 377 399 0.98

14 17 7.3e-06 0.00048 21.5 0.2 1 23 404 426 404 426 0.96

15 17 0.00012 0.0079 17.7 0.3 2 23 433 454 433 454 0.95

16 17 1.6e-07 1.1e-05 26.7 0.8 1 23 460 482 460 482 0.99

17 17 0.00079 0.052 15.1 3.1 1 23 488 511 488 511 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.14	9	8.1	2.6	1	23	23	46	23	46	0.92
2	17	5.4	3.6e+02	3.0	1.8	3	11	57	65	55	78	0.79
3	17	0.00048	0.032	15.8	1.8	2	23	84	105	84	105	0.98
4	17	0.00013	0.0085	17.6	0.8	2	23	113	134	112	134	0.97
5	17	1.6e-05	0.0011	20.4	0.6	1	23	139	161	139	161	0.97
6	17	0.00019	0.012	17.1	1.5	2	23	168	189	168	189	0.92
7	17	2.7e-07	1.8e-05	26.0	0.4	1	21	195	215	195	216	0.95
8	17	0.0038	0.25	13.0	2.3	1	23	238	261	238	261	0.96
9	17	0.012	0.77	11.4	0.8	1	23	266	289	266	289	0.93
10	17	0.44	29	6.5	0.2	1	15	293	306	293	314	0.71
11	17	4.8	3.1e+02	3.2	3.2	2	15	321	334	320	343	0.79
12	17	8.7e-06	0.00057	21.3	0.1	1	23	348	370	348	370	0.98
13	17	1.5e-05	0.00097	20.6	3.9	1	23	377	399	377	399	0.98
14	17	7.3e-06	0.00048	21.5	0.2	1	23	404	426	404	426	0.96
15	17	0.00012	0.0079	17.7	0.3	2	23	433	454	433	454	0.95
16	17	1.6e-07	1.1e-05	26.7	0.8	1	23	460	482	460	482	0.99
17	17	0.00079	0.052	15.1	3.1	1	23	488	511	488	511	0.98

Sequence Information

Coding Sequence: ATGCCCAAAGATAAACGCACCACCTTAAGGGACCACATGTTAATGAACCATTGCAATGAATGCAAATATCCATGTGCGACCTGCTCAAACGAATTTAAAACGGTAAAAAGTTTGCGAAGACACTGCAGGAATATCCATTCCATTGCTCAACCGATATTTCCCATAAACTGTGATGTTTGCGGAAAAGGCTTCTTCTTCGAAAAGGCATGCAGTGAACATAAATCGCTCAAACACAACGACGAAGCTGCAAAATGCGACGTTTGCGGTAAAATGTTCCACAGCGTTTACTATCTACGCGAACATAAAGAAACTCACACGCTAATTGATAAAACAGTTAAGTGTGATCAATGTGATCTAGTATTCACGACGAATCGCCGATTGCAGTATCACCAAAGAGCTCATCGGCCAAGGCATTTTATTTGTGACGTTTGCGGTAAAAAATTGACAAGTCGCGAAAGCTTAAAAACTCATTTAAATTCGCATAAGGGTTTGAAACCGAATACTTGCGAGGTTTGCGGAAAATGCTTCACGTCACttagatatttaaaaatacataacgTAATCCACACTGGCGAACGACCGTATAAGTGTAAAGAGTGTGGAAAATCATTTACTCAACAAAGCACTTTGATCGTTCATAGCAGGGTGTTAACCACGAAAGAAGACATTGAACTGTACATTAAGAGTATTCCAAAACGCACCTCAGAAGGATACGAATGCCCAATTTGTTCGAGACCTTCTAAACTCCCTTGCCTTTTGAAGAAGCACATGTTATTATGTCACTGCGAAGAACGGCACCCTTGCACCGTATGTCCTCAAACGTTCAACAGTGAACTCGGCCTGAAGCTCCACACTTTTCGGATACACAGCGAAGTTTTCACCTGCCCGATTTGCAACAAACTTGTGTCGAACCAAAATCGCGTCATCCACGAAATGAGACACACTCGCGCGTTCGCTCTTCATTGCGACGTGTGCGGAAAAGGATTCTACCTCAAAAGCGAATgcaattttcacaaaaagaTAAAGCACGGCGATAATCCGTTCAAGTGTGATGTTTGCGGAAAAGCGATCAGCAACGCGGCCAATTTGAGGGAGCACAGGGAAACGCACGACACTTCCCAAAAAGAGTTTCAGTGCGAGCAATGCAACAAGGTGTTTCCAACGCACATGAAATTGCAGCGGCACATGTACAGACATAAAAGGATTCAGTACGTTTGCGATATTTGTGGAAAAGAACTGAAAACTGCCTCGAGTTTGAAAAATCACCAGACGGCTCACAAGGGATTGAAACCCAATACCTGCAATGTTTGTGGTAAATCTTTCGGCACGGCGCAGTATTTAAGAATTCATTCTGTCACACACACTGGCGAAAGGCGCTTCAAATGTAAGGAGTGTGGAAAAGCGTACACACAATCTAGTTCGATGGTTGTGCATATGAGATCACACACCGGCGAACGTCCGTATAAATGCCACCTTTGCGAAAACAGTTTCATAACGAAGCAGTTGTTGAAAGGCCACTTGAAGAAAATGCACAAGGTTTTAAAAACTTAA
Protein Sequence: MPKDKRTTLRDHMLMNHCNECKYPCATCSNEFKTVKSLRRHCRNIHSIAQPIFPINCDVCGKGFFFEKACSEHKSLKHNDEAAKCDVCGKMFHSVYYLREHKETHTLIDKTVKCDQCDLVFTTNRRLQYHQRAHRPRHFICDVCGKKLTSRESLKTHLNSHKGLKPNTCEVCGKCFTSLRYLKIHNVIHTGERPYKCKECGKSFTQQSTLIVHSRVLTTKEDIELYIKSIPKRTSEGYECPICSRPSKLPCLLKKHMLLCHCEERHPCTVCPQTFNSELGLKLHTFRIHSEVFTCPICNKLVSNQNRVIHEMRHTRAFALHCDVCGKGFYLKSECNFHKKIKHGDNPFKCDVCGKAISNAANLREHRETHDTSQKEFQCEQCNKVFPTHMKLQRHMYRHKRIQYVCDICGKELKTASSLKNHQTAHKGLKPNTCNVCGKSFGTAQYLRIHSVTHTGERRFKCKECGKAYTQSSSMVVHMRSHTGERPYKCHLCENSFITKQLLKGHLKKMHKVLKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -