Basic Information

Insect: Dascillus cervinus
Gene Symbol: -
Assembly: GCA_949768715.1
Location: OX458316.1:6643311-6645181[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 6.9e-05 0.0046 18.4 0.3 1 23 181 203 181 203 0.99

2 12 4.4e-05 0.0029 19.1 1.4 1 23 209 231 209 231 0.97

3 12 0.00049 0.033 15.8 0.7 3 23 250 271 248 271 0.92

4 12 4.2e-05 0.0028 19.1 2.9 1 23 281 303 281 303 0.98

5 12 4.4e-06 0.00029 22.2 1.2 2 23 310 331 309 331 0.96

6 12 4.9e-07 3.3e-05 25.2 0.1 1 23 337 359 337 359 0.99

7 12 4e-07 2.6e-05 25.5 0.3 1 23 365 387 365 387 0.98

8 12 4.4e-06 0.00029 22.2 6.1 3 23 395 415 393 415 0.97

9 12 0.0018 0.12 14.0 0.8 1 23 421 443 421 443 0.98

10 12 0.00045 0.03 15.9 0.5 1 23 449 471 449 471 0.97

11 12 0.00077 0.051 15.2 1.3 1 23 477 499 477 499 0.98

12 12 7.6e-05 0.005 18.3 2.4 2 23 505 527 505 527 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	6.9e-05	0.0046	18.4	0.3	1	23	181	203	181	203	0.99
2	12	4.4e-05	0.0029	19.1	1.4	1	23	209	231	209	231	0.97
3	12	0.00049	0.033	15.8	0.7	3	23	250	271	248	271	0.92
4	12	4.2e-05	0.0028	19.1	2.9	1	23	281	303	281	303	0.98
5	12	4.4e-06	0.00029	22.2	1.2	2	23	310	331	309	331	0.96
6	12	4.9e-07	3.3e-05	25.2	0.1	1	23	337	359	337	359	0.99
7	12	4e-07	2.6e-05	25.5	0.3	1	23	365	387	365	387	0.98
8	12	4.4e-06	0.00029	22.2	6.1	3	23	395	415	393	415	0.97
9	12	0.0018	0.12	14.0	0.8	1	23	421	443	421	443	0.98
10	12	0.00045	0.03	15.9	0.5	1	23	449	471	449	471	0.97
11	12	0.00077	0.051	15.2	1.3	1	23	477	499	477	499	0.98
12	12	7.6e-05	0.005	18.3	2.4	2	23	505	527	505	527	0.95

Sequence Information

Coding Sequence: ATGGAATTTGACAAAATATGTCGAATATGTTTAgccgaaaaattaaatttgaaacccaTTTTTGGAGCTGGTATACCAAATATGTTGATGACCTGCGCTTCTGTCCAGattCTCGAAGGAGATGGGCTGCCCCATCAAATATGTACCCAGTGTTTGCAGATGGTCAATCGTTCGTACCAATTTAAAGAGCAATGTGAAAAATCGGATGCGACACTTCGTGATTATATCACAAAAACGGCTTTACAAAATGAACAGAATCTCTTGAATGAAGTTaaaaacaaccagttattcccTAGCGATGTTTTGAGTCAAACTTCCATTTTTAACGAGATATTTAATGATGATAATACGCATTCATTGGTGGACAATTTCGAGGCACAAAATTCAAACACTGTTGTGCCTGATTTGGCAGAGACCATGGAGAGTTTGCAAAGCATTGCAGAGCAGTGTTTGCAAGATTCTTGGGATGCTGAAGCCAGCTCCGTTACTCAGCATTGCAGCAACGATGCAAGTtgttctaaattaaatttaattaatttatacaaGTGCCAATTTTGTGAGGGGACATTTAAAGATGAATGGAATTTAGCCGACCATATGAAAGTGCATACGGGCCAAAGCAAATATTTCTGCACGATTTGTGGAAAAGGTTGCAATAATTCAACGGAATTAAATATGCACATAAGCATGCACTCTGCAGAAAGCACTGTAATTCTtcaaaaacagaaaataattaaagaaatcaTCTGCAATGTTTgtggaaaaagttttgaaaatgtaaCATTTTTGAGAAAACATTTTAAGGACCAACATAGCAAAAATGCTGAAGTAGAAAAGAGACACACCTGCAATATATGCGGAAATAGGTATCGTTATAATAAATCATTAGTACTGCACATGAGGACTCATACAGGTGAAAAACCATTGAGTTGTGAAGTGTGCGGAAAAACATTTTCACTTCCAAGTTCACTTCATAAACATCGAAACATCCACACTGGATTAAAGAAGTACAAATGTAACATTTGTGATAAGGCATTCAGTCAAGCTGCAAATGCAGCAGCTCACATTAAAACGCATACAGGTGAAAAATCATTCGTTTGCAACATATGTGGGAAGGCTTGCGCAAGTAAAGCAAATTTGAACATCCATTTGAGAATACACAGTGGAGAGAGGCCGTACGGTTGCAAGCATTGCGATAAAAAATTCTcaaCGAGTAGCCAATTGAACAAGCACATGCTACATCACACCGGTGAGCGACCTTACGAATGCTGGCAATGCGGAAAATGGTTCAGGCAGAAGGATGCCCGAGACACACACATGCGTTACCACACCGGTGAAAGACCTTTTGCGTGCCAGTTGTGCGCGAAAACTTACATTGCTGCAAGTCATCTGAGgGCACATGTTAAAACACATACAAATGACAGAAAATATCAGTGTAATATATgtatgaaaaagttttttgaaaatcgcACCCTGAAAGCACATATATTGAGCCATTCGGGGAAGAAACCCCAGTGTACTTTCTGTGGTCGTAAATTTGCACATTCAGGCTCCCTGAAAAATCATTTGAAGGCAAATCATACTTAA
Protein Sequence: MEFDKICRICLAEKLNLKPIFGAGIPNMLMTCASVQILEGDGLPHQICTQCLQMVNRSYQFKEQCEKSDATLRDYITKTALQNEQNLLNEVKNNQLFPSDVLSQTSIFNEIFNDDNTHSLVDNFEAQNSNTVVPDLAETMESLQSIAEQCLQDSWDAEASSVTQHCSNDASCSKLNLINLYKCQFCEGTFKDEWNLADHMKVHTGQSKYFCTICGKGCNNSTELNMHISMHSAESTVILQKQKIIKEIICNVCGKSFENVTFLRKHFKDQHSKNAEVEKRHTCNICGNRYRYNKSLVLHMRTHTGEKPLSCEVCGKTFSLPSSLHKHRNIHTGLKKYKCNICDKAFSQAANAAAHIKTHTGEKSFVCNICGKACASKANLNIHLRIHSGERPYGCKHCDKKFSTSSQLNKHMLHHTGERPYECWQCGKWFRQKDARDTHMRYHTGERPFACQLCAKTYIAASHLRAHVKTHTNDRKYQCNICMKKFFENRTLKAHILSHSGKKPQCTFCGRKFAHSGSLKNHLKANHT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -