Basic Information

Insect: Dascillus cervinus
Gene Symbol: -
Assembly: GCA_949768715.1
Location: OX458320.1:26422098-26424400[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00011 0.0076 17.8 1.8 1 23 120 142 120 142 0.98

2 14 1.7e-05 0.0011 20.4 3.4 1 23 172 194 172 194 0.98

3 14 1.4e-05 0.0009 20.7 4.8 1 23 200 222 200 222 0.98

4 14 2e-06 0.00013 23.3 0.8 1 23 228 250 228 250 0.97

5 14 2.7e-06 0.00018 22.9 1.7 1 23 255 277 255 277 0.98

6 14 3.8e-05 0.0025 19.3 4.8 1 23 283 305 283 305 0.98

7 14 9.3e-07 6.1e-05 24.3 0.5 1 23 311 333 311 333 0.97

8 14 7.1e-05 0.0047 18.4 1.1 1 23 339 361 339 361 0.98

9 14 5.9e-06 0.00039 21.8 2.9 2 23 368 389 367 389 0.95

10 14 0.00013 0.0084 17.6 2.6 1 23 395 417 395 417 0.97

11 14 0.00024 0.016 16.7 1.4 1 23 423 445 423 445 0.97

12 14 1.8e-05 0.0012 20.3 1.2 1 23 451 473 451 473 0.97

13 14 3.3e-06 0.00022 22.6 2.9 1 23 479 501 479 501 0.98

14 14 0.0012 0.079 14.6 0.3 1 23 507 529 507 529 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00011	0.0076	17.8	1.8	1	23	120	142	120	142	0.98
2	14	1.7e-05	0.0011	20.4	3.4	1	23	172	194	172	194	0.98
3	14	1.4e-05	0.0009	20.7	4.8	1	23	200	222	200	222	0.98
4	14	2e-06	0.00013	23.3	0.8	1	23	228	250	228	250	0.97
5	14	2.7e-06	0.00018	22.9	1.7	1	23	255	277	255	277	0.98
6	14	3.8e-05	0.0025	19.3	4.8	1	23	283	305	283	305	0.98
7	14	9.3e-07	6.1e-05	24.3	0.5	1	23	311	333	311	333	0.97
8	14	7.1e-05	0.0047	18.4	1.1	1	23	339	361	339	361	0.98
9	14	5.9e-06	0.00039	21.8	2.9	2	23	368	389	367	389	0.95
10	14	0.00013	0.0084	17.6	2.6	1	23	395	417	395	417	0.97
11	14	0.00024	0.016	16.7	1.4	1	23	423	445	423	445	0.97
12	14	1.8e-05	0.0012	20.3	1.2	1	23	451	473	451	473	0.97
13	14	3.3e-06	0.00022	22.6	2.9	1	23	479	501	479	501	0.98
14	14	0.0012	0.079	14.6	0.3	1	23	507	529	507	529	0.94

Sequence Information

Coding Sequence: ATGGCGCATTGTGATTCAATTGAATTCAAAACTGAACTGGAAGCTCTTGTTGCAACAGATGAGTTTGATGCTGTTGAAGATGTTGTAGTTTGTTCCGAGGATATTGCCAGTAAGACACAAggCAAAACTGCAGCATCAAAATACAGTGATCAAATCAATCATCCTTCTGAGGACGCAGTTACATCAACAATAAGCAATTCTGGATTACAGACAGATTTCAAAGAAGAAGATGGGAACGAAGATTACATCGTCCAACATCTTTTCACCTCGACCTCAAATCAAGACGAAATCGATATCGAAAAGTGCGAACTAACTTTTGACTTAGTTTCAAAAGACGAGTTTCCCAAAGTAGCAAAGCATGAGTGTGCCGAATGTGAAAGCTGTTTCGCCGACAATTACCAACTTGAAGAACACTTACGAACCCACACTCTTGACAGACCCAAACGCAACCGAAAAACAAAGGTCAAAACAGAAGCCAATAAAGCCTTTACTCAAAATGGCAATCCCAAAAAGTTCAAATGCAATCTGTGCGATAAAGCTTTCGCGCAAAGGTGCAACCTTAGATATCACAGGATGGTTCATAAAGGAGAGACTCCATTTAAGTGCACCGAGTGCAATAAAGGTTTCATATCCAAGTGCAATCTCAAGATGCACATGTTCACTCACACCGGCGGCAAGCCTTTCAAGTGCCAACAGTGCGATAAATCATTCGTCCAAAACGGCGCTTTCAAGAACCACATGTTAGCCCACGAGCGCAATTCTTTCAAGTGCCACTTATGTGACAAAACTGTCACCTCAAAGAGTACCCTCAACGCGCACTTATTGGTACATGAAGTCGAGAAACCCTTTAAATGCCAACTGTGTGATAAACAATTTACgcacaaaaagtttttaaaaaatcacattttagtCCACATGGGTAAGAAACCTTACGCGTGCCACATATGTGGCAAAACTTTCACCGTCAGTGTTGAGCTGCGAACGCACTTATTAGTTCATAATGGAGACAAGTCCTTTAAATGCAATGCGTGCAATATAGCTTTCACAGACAGCGACCGTCTCCATAGACACATGTTGGTTCACAGTGGCAAGAAACCCTGCACATGCCACGTGTGCGGAAAAATGTTCTCACACGCCATCGACCTCAAAGCACACATGGTGGTTCACGACGGCGAGAAAACCTTTAAATGCGACCAGTGTGATAAAGGGTTTACCCAAAAACACATCTTGAAAACGCACATGTTGGGACACGAAGGAGAGAAAGCCTTCAAGTGCAACCTTTGTGATAAAGCGTTTGTGTTTGTAAACCGCCTCAATAGGCACATGTTGTTTCACAACGATGACAGTCCCTTTAAGTGCCACTTGTGCGAGAAGATTTTCAGTGAAGCTGACACCCTTCAAACGCACATGTTGGATCACCCCAGCGAAAAAACGCATGAATGCAATGTCTGTAAAAACACCTTCGCGACAAAAAGCAGTCTGAATAAACACATGTTGACGCATAAGGACgagaaactttttaaatgcCAATTGTGCAATGAAAGTTTCAAACAAGAGATCAGTTTCATAATCCACCTAGTAGCTCATAGCGACgaagaattgttagaattCAATGAGGAGACAGTGCTATGA
Protein Sequence: MAHCDSIEFKTELEALVATDEFDAVEDVVVCSEDIASKTQGKTAASKYSDQINHPSEDAVTSTISNSGLQTDFKEEDGNEDYIVQHLFTSTSNQDEIDIEKCELTFDLVSKDEFPKVAKHECAECESCFADNYQLEEHLRTHTLDRPKRNRKTKVKTEANKAFTQNGNPKKFKCNLCDKAFAQRCNLRYHRMVHKGETPFKCTECNKGFISKCNLKMHMFTHTGGKPFKCQQCDKSFVQNGAFKNHMLAHERNSFKCHLCDKTVTSKSTLNAHLLVHEVEKPFKCQLCDKQFTHKKFLKNHILVHMGKKPYACHICGKTFTVSVELRTHLLVHNGDKSFKCNACNIAFTDSDRLHRHMLVHSGKKPCTCHVCGKMFSHAIDLKAHMVVHDGEKTFKCDQCDKGFTQKHILKTHMLGHEGEKAFKCNLCDKAFVFVNRLNRHMLFHNDDSPFKCHLCEKIFSEADTLQTHMLDHPSEKTHECNVCKNTFATKSSLNKHMLTHKDEKLFKCQLCNESFKQEISFIIHLVAHSDEELLEFNEETVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -