Dcer021377.1
Basic Information
- Insect
- Dascillus cervinus
- Gene Symbol
- -
- Assembly
- GCA_949768715.1
- Location
- OX458320.1:24249175-24269468[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 2.9e-05 0.0019 19.6 5.8 1 23 919 941 919 941 0.97 2 17 1.2e-05 0.00079 20.8 0.5 1 23 947 969 947 969 0.98 3 17 0.00011 0.0072 17.8 4.5 1 23 975 997 975 997 0.97 4 17 4e-07 2.6e-05 25.5 0.9 1 23 1003 1025 1003 1025 0.97 5 17 0.00011 0.0075 17.8 1.1 1 23 1031 1053 1031 1053 0.98 6 17 1.2e-05 0.00076 20.9 3.8 1 23 1059 1081 1059 1081 0.98 7 17 2e-07 1.3e-05 26.4 2.3 1 23 1087 1109 1087 1109 0.98 8 17 8.2e-05 0.0054 18.2 2.5 1 23 1115 1137 1115 1137 0.98 9 17 0.0002 0.013 17.0 1.3 1 23 1143 1165 1143 1165 0.97 10 17 0.0094 0.62 11.7 5.6 1 23 1171 1193 1171 1193 0.98 11 17 8e-05 0.0053 18.2 1.2 1 23 1199 1221 1199 1221 0.97 12 17 9.2e-05 0.0061 18.1 1.7 1 23 1227 1249 1227 1249 0.97 13 17 1e-05 0.00068 21.0 1.9 1 23 1255 1277 1255 1277 0.98 14 17 0.0039 0.26 12.9 6.1 1 23 1283 1305 1283 1305 0.98 15 17 0.00016 0.01 17.3 1.3 1 23 1311 1333 1311 1333 0.97 16 17 9.7e-06 0.00064 21.1 3.3 1 23 1339 1361 1339 1361 0.98 17 17 8.8e-06 0.00058 21.3 0.9 1 20 1367 1386 1367 1388 0.94
Sequence Information
- Coding Sequence
- ATGGATCATTGCGATAGTTGGAGTTCCCTTGAAATTGATTTGGAACAAGCGGAATTTAgaataaaagatgaaccacAAGATGGTTCACTTTATAGCAGGGATTCTCTACAGCCTGTTAAAATGAACGAAAAACATAAACGCGAAGATCACATGGCCCAAGAATCTTCCGCTTTAGATTTTGGTCAAAGTACATTGGAATCAAAAaccAATTTGTGTAACTCCGATGATTCAAAGTTATtcgaatttaaattagaaccaGAAGAACTTattataaaagatgaaccagaagaagtttTGGAAGAAACCCGTTTACTTGAATTGTTAGTTTGCGGTACAAATCCTTCAATACTTGCAATTGGTGATTTTACAGCCAACACTGAAGAACAGAGAATGAAAATTGAATCAAAAGAAATTATCAAGCATGATACAAACCCGCCAACACTTAGTATTAGAGACCACATAACAAACGCTGAGAAAATTATAGAGGCAGCGTATGATCGGTTCAGAGAATGGTGTACCGAAAAAAAAGTAAGAACTTATACTGAGAACGTCATGTTGGCGtattttaccgaaaaatctAAAAAGTATAAATCGTCTACCTTGTGGGCCCAATATTCCATGGTAAAATCATGTCTATTAGTGAACGACAACACTGACATAGGTAAGTATCCAAAGTTGATGGCATTGCTCAAACGGAATTCGGACGGCTACCAagcgaaaaaatctaaagtttTGACCAGAGACCAGATAGAAACATTTTTGACGGAAGCAAATGacaatgaatatttaatgatcaaggtTGCTCTAATATTTGGCATTGCGGGCACCTGTCGATCACACGAATTAACAACCATCACAGTCGACGATATTGAAGTCGCtaattcatctttaattataaaaataccaaacacaaaaaataaaataccacGAACCTTTGTGGTTACTGAAAATGAGAAAAAGATAGATTTTATTGGCTTATATAGGAAATATACAGGACTTCGGCCACTTCAAGTTAATAATCgtcgttttttcttattttacaaaacaggaAAATGTACGAGTCAACCTGTTGGAAAGAACACATTTGaaccaGAAGAACTTattataaaagatgaaccagaagaagtttTGGAAGAAACCCGTTTACTTGAATTGTTCGATTGCGGTACAAATCCTTCAATACTTGCAATTGGTGATTTTACAACCAACACTGAAGAACAGAGAATGAAAATTGAATCAAAAGAAATTATCAAGTATGATACAAACCCTCCAACACTTGGTATTAGAGACCACATAACAAACGCTGAGCTAAAGATGGATAATTGTGATGGTTGGAGTTCCCTTCAAATTAACTCAGAACAGGAGAAatttagaataaaaaatgaaccaCAAGAAGACGGTTTGTTTAATGCCGTCAAATCTGATATAAAGTTTTCAACACTTTGTAGTACGGATTTTCTCCAGCCTGTTAAAGTAGAAGAAAAACATGAATCTTCCACTTTAGATTTTGGCCACAGTACATTAGAATCGAAACTAAAGATGGACAATTGTGATGGTTGGAGTCCACTTGAAATTAACTTGGAACAAGAggaatttataataaaagatgaaccacTAGAAGACAGTTCACCTATTGTCTTCAAATATGAAACAAATCTTTCAGCACTTAAAGTGAacgaaaatcataaaaatgaAGACCACATAGCCCAAGCATCTTCCACTTTAGATTTGGGCCAAAGTAGATTGGAATCAAAAgCAAATTTAGACAATTTTGATGATTCAAAGTcatttcactttaaattaGAACCAGAAGAACTTATTATAAAGGATGAACCAAAAGAAGTTGTGGTCGAAAACAGTACACTTGAATTCATAGATTGCGGTACAAATCCTTCAATACTTTCGATTGGAGATTGTACAACCAATACTGAAAAACTGAGAATGAAATATGAAGCAGACGAAATCATTAAGTACGATACAAATCCACCAACAATCGGTATTAGAAACCGCACTGCAAACACTGAGCTAAAGATGGATAATTATGATCGTTGGAGTTCCCTTGAAATTAACTCGGAACAAGAGGAATTTAgaataaaagatgaaccacAAGAAGACAGTTCACCTATTATCTTCAAATATGAAACAAATCTTTCAACACTTTGTAGTAGGGATTTTCTGCAGCCTGTTAAAGTGAatcaaaatcataaaaatgAAGACCACATAGCCCATGAATTTTCCACTTTGGATTTTGGTCAAAGTAGATTGGAATCAAAAgcaaatttaagcaattttgatGATTCAAAGttagttgaaattaaattacaaccaGAAGAATTCAATATAAAAGATGAACCGGAAGACGTTGTGGACGAAGACGGTTCACTTGAATTCATAGATTGCGGTACAAATCCTTCAATATTGCCGATTGAAGATTGTACAGCCAATACTGAAGAACAGAAAATGAAATATGACACAGACGAAATCATTAAGCACGATACAAATCCACCAACAATTGGTATTAGAAACCACACCGCAAACACTGAGattaaaGTGGACTCCACAATATCTACAATTGATGAATTAGAGAACATTCGTTCatgtttcattaaaattatcaTGATTCCTAAGCATGTGATTGCCTCAAAAATGGACAGCtatctcaatttcaaattaataggCGACGTAGAAACAAATGATAATTATATAACTCAAGAATCTTCTGCATATCGGAAAAGGCATACCAGTGAAAAACTCTTTCAATGCTTCAAGTGCCAGAAACGTTTTAAACAAAGTAGCTATCTAAGAAAGCACATGTTGTTTCATGAGGGTCCGAAACCTTTCAAATGCGATCTGTGTGGAGAGACTTTTACGCAAAATGGCAGCCTCAAACTGCACAAGTTGATTCATGACGGCAAGAAACCTTTCGACTGTCAAGAGtgtcacaaaaattttatccaAAAAGGACATTTCCAGCAGCATATGTTAGTTCACTCTGGCGAGAAGCCTTTCAAATGCCAAGAGTGTGGTAGGGCTTTCACCAGCAAGAGCAATCTCAAACAACACGAGTTGATTCATGACGGCAAGAAACCTTTCACCTGCCAAGAgtgtaacaaaaatttcaccACAAAAGCAATTCTCCAGCAACATATGTCAATTCATACTGGCGAGAAGCCTTTCCAATGCcaacagtgtaataaaaatttcactCAAAGAGGACATCTCAAACTACATATGTCAATTCATACAGGCGAGAAGCCTTTCAAATGCCAAGAGTGTAATAAAACCTTTGCACAAAATGCGCATCTCCAACGACATATGTTAGTTCATACGGATGAGAAGCCTTTCCAATGTCAAGAGTGTGGTAGCTGTTTCGCCACCAAGAGCAGTCTCAAATTACACAAGTTGATTCATGAAGACAAGAAACCTTTCAATTGCCAACAGTGTAACAGAACTTTTAAACAAGAAGAATCTCTCCAACTGCATACGTTAATTCATACAGGCAAGAAGCCTTTTAAATGCGAAGAGTGTGGTAGCCGTTTCAACCACAAGTGCAGTCTTAAACTGCACAAGTTAATTCATGATGACAAGAAACCTTTCAACTGCCAACAGTGTAACAAGGGTTTCATCACAAATGCACATCTCCAACAACATGTGTTAATTCATACGGGCGAGAAACCTTTCCAATGCCAAGAGTGTGGTAACCGTTTCAACAGCAAGAGCAGCCTCAAACTACACAAGTCGATTCATGATGACGAGAAACGGTTCAGCTGTCAACAGTGTAACAAAAAGTTTAATCAGAAAGGACTGCTCAAATCGCATATGTTAATTCATACAGCCGAAAagccttttaaatgtcaagagtgtgGTAAGCTTTTCAACCACAAGTGCAGTCTCAAACTGCACAAGTTGATTCATGAAGACAAGAAACCTTTCAACTGCCAACAGTGTAACAAAGGTTTTATCTTAAATGCACATCTTCAACAACATATGTTGATTCATACAGGGGAGAAGCCTTTCAAATGTCAGCAGTGTGACAAAAACTTTACTCGAAAATGGTATCTTCGACAACATATGTTTGTTCATAGTAATgagaaacctttcaaatgccaaGAGTGCGGTAGAAGTTTTAACAGCAAGAGAAATCTTATAAAGCACAAATCGATTGAAGAGGGCAAGGAAGGTTTTGAGTGTGTGAAAAGACTTTTACCAAATGCAGCCTTCTAA
- Protein Sequence
- MDHCDSWSSLEIDLEQAEFRIKDEPQDGSLYSRDSLQPVKMNEKHKREDHMAQESSALDFGQSTLESKTNLCNSDDSKLFEFKLEPEELIIKDEPEEVLEETRLLELLVCGTNPSILAIGDFTANTEEQRMKIESKEIIKHDTNPPTLSIRDHITNAEKIIEAAYDRFREWCTEKKVRTYTENVMLAYFTEKSKKYKSSTLWAQYSMVKSCLLVNDNTDIGKYPKLMALLKRNSDGYQAKKSKVLTRDQIETFLTEANDNEYLMIKVALIFGIAGTCRSHELTTITVDDIEVANSSLIIKIPNTKNKIPRTFVVTENEKKIDFIGLYRKYTGLRPLQVNNRRFFLFYKTGKCTSQPVGKNTFEPEELIIKDEPEEVLEETRLLELFDCGTNPSILAIGDFTTNTEEQRMKIESKEIIKYDTNPPTLGIRDHITNAELKMDNCDGWSSLQINSEQEKFRIKNEPQEDGLFNAVKSDIKFSTLCSTDFLQPVKVEEKHESSTLDFGHSTLESKLKMDNCDGWSPLEINLEQEEFIIKDEPLEDSSPIVFKYETNLSALKVNENHKNEDHIAQASSTLDLGQSRLESKANLDNFDDSKSFHFKLEPEELIIKDEPKEVVVENSTLEFIDCGTNPSILSIGDCTTNTEKLRMKYEADEIIKYDTNPPTIGIRNRTANTELKMDNYDRWSSLEINSEQEEFRIKDEPQEDSSPIIFKYETNLSTLCSRDFLQPVKVNQNHKNEDHIAHEFSTLDFGQSRLESKANLSNFDDSKLVEIKLQPEEFNIKDEPEDVVDEDGSLEFIDCGTNPSILPIEDCTANTEEQKMKYDTDEIIKHDTNPPTIGIRNHTANTEIKVDSTISTIDELENIRSCFIKIIMIPKHVIASKMDSYLNFKLIGDVETNDNYITQESSAYRKRHTSEKLFQCFKCQKRFKQSSYLRKHMLFHEGPKPFKCDLCGETFTQNGSLKLHKLIHDGKKPFDCQECHKNFIQKGHFQQHMLVHSGEKPFKCQECGRAFTSKSNLKQHELIHDGKKPFTCQECNKNFTTKAILQQHMSIHTGEKPFQCQQCNKNFTQRGHLKLHMSIHTGEKPFKCQECNKTFAQNAHLQRHMLVHTDEKPFQCQECGSCFATKSSLKLHKLIHEDKKPFNCQQCNRTFKQEESLQLHTLIHTGKKPFKCEECGSRFNHKCSLKLHKLIHDDKKPFNCQQCNKGFITNAHLQQHVLIHTGEKPFQCQECGNRFNSKSSLKLHKSIHDDEKRFSCQQCNKKFNQKGLLKSHMLIHTAEKPFKCQECGKLFNHKCSLKLHKLIHEDKKPFNCQQCNKGFILNAHLQQHMLIHTGEKPFKCQQCDKNFTRKWYLRQHMFVHSNEKPFKCQECGRSFNSKRNLIKHKSIEEGKEGFECVKRLLPNAAF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -