Dcer016270.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dascillus cervinus
Gene Symbol
ZNF236
Assembly
GCA_949768715.1
Location
OX458319.1:29128724-29133925[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.088 5.8 8.7 1.7 1 23 141 163 141 163 0.98
2 25 0.0052 0.35 12.5 0.4 1 23 167 189 167 189 0.98
3 25 0.015 1 11.1 2.0 2 23 195 216 195 216 0.95
4 25 0.0041 0.27 12.9 0.1 1 23 222 244 222 244 0.98
5 25 0.013 0.89 11.2 3.3 2 23 256 277 255 277 0.95
6 25 0.00081 0.054 15.1 5.5 1 23 300 322 300 322 0.98
7 25 6.4e-05 0.0042 18.5 1.0 1 23 328 350 328 350 0.98
8 25 0.00025 0.016 16.7 1.3 1 23 356 379 356 379 0.96
9 25 0.0035 0.23 13.1 2.1 1 23 389 412 389 412 0.97
10 25 4.1e-05 0.0027 19.2 0.6 1 23 504 526 504 526 0.98
11 25 1.3e-05 0.00088 20.7 0.5 1 23 532 554 532 554 0.99
12 25 0.0014 0.094 14.3 0.9 1 23 565 587 565 587 0.99
13 25 0.42 28 6.5 5.1 1 23 598 620 598 620 0.98
14 25 0.0001 0.0067 17.9 1.0 1 23 676 698 676 698 0.99
15 25 7.6e-05 0.005 18.3 2.0 1 23 704 726 704 726 0.98
16 25 1.3e-05 0.00085 20.7 2.5 1 23 732 754 732 754 0.97
17 25 0.089 5.9 8.7 3.1 1 23 760 782 760 782 0.92
18 25 3 2e+02 3.9 1.0 2 19 1098 1115 1097 1118 0.92
19 25 1.5e-05 0.001 20.5 7.6 1 23 1177 1199 1177 1199 0.98
20 25 0.00012 0.0076 17.7 2.1 1 23 1205 1227 1205 1227 0.99
21 25 0.00024 0.016 16.7 3.0 1 23 1235 1257 1235 1257 0.97
22 25 0.00057 0.038 15.6 1.2 1 23 1263 1285 1263 1285 0.97
23 25 0.0011 0.07 14.7 2.4 3 23 1394 1414 1392 1414 0.96
24 25 1.1e-06 7.5e-05 24.1 1.4 1 23 1420 1442 1420 1442 0.98
25 25 0.00033 0.022 16.3 1.4 1 22 1448 1469 1448 1469 0.96

Sequence Information

Coding Sequence
ATGTTTAATAGTAATTCAGCCTGGCAGcctaaaaataatgaaacattTACGTACATTGCAATACCTCTTGATGCATTACAGAGAACATATGGTGAACAAGAACAACCCTTAACAGTTACTCAGAATGTAGTTGTAAAAACTCTCCCGGATGGAAGCATGTGCATAATCGATTCAAACCATtttttaaacaGTGATAATGTTATAAACTTACCTCAAGAAGAGGAAACAATGGTAATAGAATCTCCAAGTCCAGCACCCACTGAAAATACATCGAAATcggtgattttaaaatctcacACTAAATACTTGGATGATACTAATGCTAATAAATCACAAATACggtattttaaatgtaaaatcgCACAAAATACCCAAAGTAATGTCAAAATTAAGAAAGTTAGAGAATGCAGAAGAGGCCCTTTTAAATGCGCATCTTGTGGAGATACTTTTGCGAAAATGCTTCATTACAAGAGACATATGGAAGTGCATGCAAAGAGGTTTAAATGTGATCAATGTTCTTCCAGTTACAACATGGAAGAAAACTTAAAACTTCACATGGCAATACACACAAAAAATGAACCAACATGTCCGGTGTGTCATCGAAAATATCAAAGGCTAGCGAGCTTAAAATCCCATTTGTTCCTGCATCAAGTGGAAGAAACCTTCACATGCACTGAATGTTTAGCGGAATTTGAAAGAGAGGAAGATCTTACTAAACATGCAGAAACACATCTAAAAGAGACCTGCCCTGAAAACTTGCCTTTAACTTGCTGTTACTGCAATCGTATTTTTCAGAACTCTGACGAATATAAGGAACACATGTCGTTTCATAtcaaaatgaaAAAGTTGGTGCTAAGTCGAAAACGGCACAGGAAAAAAGTTAATGTTGAGTATCCACATAAATGTGAAGTTTGCAAAAAAACTTTCTCAAAATATTGTCTTTTAGAAAGACATGCCAGAATACACAGTGGGGAACGCCCTTTTGTGTGTCCATTTTGTCATCGGGGATTTACTCAAAAAGGAACATTAGCCATTCATGTGAACAGGCACAATGGCAACAAGCCATATGAGTGTACATTATGCCCTgcaaaattttgccagaaggGAAATTTACGGGTCCATGTAGAAAAAACCCACATAGCACCCAGTACCGGacaaaaaatatacaaatgttCAATGTGCACTTGCATATTTAAAAGAGTGTCATCATTAAATGGCCACATTACAAGAGCTCACTCTGCATCAAAGGATTGTGATGATCTATCATCAGTTTTAGCAAAGCTGAAGGAATTAGAAAAACAAGTTAATTCTACAAAGGAaccacaaaatttacaaacaaaaacagAATTATTAGCTTTAAAGGCGTCTCTCAGTCAAGGGGGTAGTATCAATAATAATACAGTAACTAAAGACCCTCAagtgcaatttgtaaaattagttGATTCAGTTGTGGAAGGTACAATAAAGGAATATATGGTGAAACAAAGGAAACTTGGAGATGTGAGATGGTACATGTGTTCTTACTGCATCAAGGAGTTTAAAAAACCATCAGATTTGATTAGACATCTCAGGGTCCACACCAAGGAGAAACCATTTCAGTGCACAGATTGCGATCAATCATTTGCTTTGAAGAGTACTTTAGCCACACACATCACTACACACATTCAAGGAATAGATTCGGCAGCAGGTTCTTATCAGTGCGCTGcatgtttaaaatattttaggaGTGCGAGGAGTTTAAGTATACATATGAGaaaacacGGAAAGATTTGTATAaatcaaaagaaaaattttaaatgcaacttGTGTTTTAAGTTGTTCTGTTCATCAGCAAAAGCGAAAACTCACACACAATCTCATCAATGTGTGACAAGTACTCTAGAAGAAATTGATGATGAACAGTCTACCAAAATTGAAGTAATGTTGAAGGAACCTATGTTAGAAACCCCAAATGGTTTGTTTCCAGTTGCTGCACCCAAATCGAAAGTGCCTTCCGTAGATGCGAACCAACCCACAACTAGGCCTTATCGGTGTCAAATTTGTAGTGGAGCCTTTATAAAACCTATACATTTAAAAAGACATATGTTAACACATACGGGAGAAAAGAAATTTCGTTGTCAATCATGTCCAAAGGGATTCTATAATTCATATTCTTTAAACGAACATATGAAGTATCATAATGGAGTGAAGAATTTTTGCTGCGAATTATGTGATAAGCGATTTGTGAGCAATTCTCTATTGAAACGGCATCTTATTATGCACAGTTCTTATAGGCCTTTCTTGTGTCCTTATTgcaaaaaacgttttaaaacaGTAAACTTGTGCAGGAAACATATTGGTATTCACCTGAAAGAGATTGTGTTACAAgCAACAAATGAGGGTGAAGTAGGAGCAGCTAAAATAATGGATTTAACAGACACATTATCAGATAATCCATTTTCAATAACGGATGCACAGAATATCATTAACGATAAAGACATTAATAATGattcacaaaatattttcaaaaggCCTGCAGAAGATTCAGCAACTgATAACTCTGACGATATGCAAAGCAGATCTCCTCAACAATCATTTGAAATATCTGTTGATTCATCTGTTTTATCAGATAAGGCCAAAAATATTATGTTAACAACTACTGTAAATGATCCTGTTGATATAGAAACAACAGAATTGATCAATCCTTCAGAAGAAAGTCTTCATGCTGTTGATAGTACATATCCAActgtttatataaattatGGAGACTTGCAAACCTTGGGGGCTACTAATTTATACAACACTTGGCTACCAAATTTCAagGGTAATGATCAATTGATATTGAACTCGGGTGAagatcaaaattcaaatattttattccaCGTCGATCCTTTATTGAATAATGCAAGCCATGACCTGACAAATTCTCAATACCTGGACACACTCACTCCAAACTTGACTCTAAATAATAACTTTAGTACTTTTTCTGTCCAAAATTCAGTGGTCATTGATCAAACACCGATCGTATTAGCATTACCAGATCAAAATCCTCCATCTTACCAATTcaattcaaacattaattctacagtttttaaatctgatgataaaactgaaaatttacaatttataaatacattaAACAAttctaattatattttaacaagTCAAAACAGAGAGTCCCTGCCAGTAACAACTAATTCCTTTAATTCACTTAATGCTAATCAGTCCTTGGATTTACCAGTGAATTCTCTACTCAATTCAATGAATTCCTTGAATGGTTCAACTCTAAACTTGTTTGAAACAGCAGATGTAATGTGTTCAATGTGTAAAAGTAACTTCACAACGTTACAAGAAATGCAAAATCACAGTTGTCTAAATTCAGCCGATTCTCCTGAAGATGATATGGAAGAATTACCAGAAGATGAAAATCCGCAAATGGATACAgatgatttaaatgaaattaatgaagACAATGAAGACAATGAAGATGAAACGGACAGTGAACAATCAATAAGCGTTTCATCAAATCAAAAATGGGCAACAACAAAACATAAATGCACTTATTGTGGTAAAAGGTTTAAAAAGCGGTGTGATTtgGTTAGACACATTAGAACTCACACAGGTGAAAAACCTTATGTGTGTGAAAGATGTAGCAAAAGCTTTTCACTCAAATCCACCTTGGAATACCATTACAATACACACAAACCTGGAGGAAATAAGGAATTCACGTGTTCTGTTTGTAATTCGTGTTTTAGTTCCAAAAGTAGCCTTAACGTTCACACTTCCATACACACAGGGATTCGAAAATATCAATGTCCGTTTTGTCCCGAAAGATTTAGGACTTCGGGGCACAGAAAATCACATGTGGCCATCCATTTGAAGCAGACCAATTTATTAGAACAGTTTGCTaacaaaaattctaaagtaaaTTCGTACCTTGTCTCGGCCGTTAATGAACAAAGCGGTATCCCCACAGTTGCTTCATACATTGCCAACGACAATTTTATACTACAAAATGAgggcAATAATGTAGGCATGCTCCAATTAAATGGAATAATGAACTTAAACCCTGATGTTCAAGTACAGTCAATGCCATTGCAGCAACTGGACTTAATGGAAGGTTCTTCTTTAGCGCACTTAGATCAAggcctttttacaaattacgCCTTAAATGAAACCAAAGAGAAAGTCACAGTTAATTGTGATGTCTGCCACAAGAGTTACAATTCGAAAGATGTTCTTAGAAagcacaaaaaaattcacgacAGAAGGAAAGAATTTCAGTGCGGAAAATGCAATAAGGGGTTCACCTCGAATGATTCCCTCAATAAACACATGCAGTTGCATTCCGGCCACCGTCCATTTTCGTGCCAACATTGTGCCAACAGTTTCACCAATGAAGGCAACCTGAAGACGCATATGAGAAGGTAA
Protein Sequence
MFNSNSAWQPKNNETFTYIAIPLDALQRTYGEQEQPLTVTQNVVVKTLPDGSMCIIDSNHFLNSDNVINLPQEEETMVIESPSPAPTENTSKSVILKSHTKYLDDTNANKSQIRYFKCKIAQNTQSNVKIKKVRECRRGPFKCASCGDTFAKMLHYKRHMEVHAKRFKCDQCSSSYNMEENLKLHMAIHTKNEPTCPVCHRKYQRLASLKSHLFLHQVEETFTCTECLAEFEREEDLTKHAETHLKETCPENLPLTCCYCNRIFQNSDEYKEHMSFHIKMKKLVLSRKRHRKKVNVEYPHKCEVCKKTFSKYCLLERHARIHSGERPFVCPFCHRGFTQKGTLAIHVNRHNGNKPYECTLCPAKFCQKGNLRVHVEKTHIAPSTGQKIYKCSMCTCIFKRVSSLNGHITRAHSASKDCDDLSSVLAKLKELEKQVNSTKEPQNLQTKTELLALKASLSQGGSINNNTVTKDPQVQFVKLVDSVVEGTIKEYMVKQRKLGDVRWYMCSYCIKEFKKPSDLIRHLRVHTKEKPFQCTDCDQSFALKSTLATHITTHIQGIDSAAGSYQCAACLKYFRSARSLSIHMRKHGKICINQKKNFKCNLCFKLFCSSAKAKTHTQSHQCVTSTLEEIDDEQSTKIEVMLKEPMLETPNGLFPVAAPKSKVPSVDANQPTTRPYRCQICSGAFIKPIHLKRHMLTHTGEKKFRCQSCPKGFYNSYSLNEHMKYHNGVKNFCCELCDKRFVSNSLLKRHLIMHSSYRPFLCPYCKKRFKTVNLCRKHIGIHLKEIVLQATNEGEVGAAKIMDLTDTLSDNPFSITDAQNIINDKDINNDSQNIFKRPAEDSATDNSDDMQSRSPQQSFEISVDSSVLSDKAKNIMLTTTVNDPVDIETTELINPSEESLHAVDSTYPTVYINYGDLQTLGATNLYNTWLPNFKGNDQLILNSGEDQNSNILFHVDPLLNNASHDLTNSQYLDTLTPNLTLNNNFSTFSVQNSVVIDQTPIVLALPDQNPPSYQFNSNINSTVFKSDDKTENLQFINTLNNSNYILTSQNRESLPVTTNSFNSLNANQSLDLPVNSLLNSMNSLNGSTLNLFETADVMCSMCKSNFTTLQEMQNHSCLNSADSPEDDMEELPEDENPQMDTDDLNEINEDNEDNEDETDSEQSISVSSNQKWATTKHKCTYCGKRFKKRCDLVRHIRTHTGEKPYVCERCSKSFSLKSTLEYHYNTHKPGGNKEFTCSVCNSCFSSKSSLNVHTSIHTGIRKYQCPFCPERFRTSGHRKSHVAIHLKQTNLLEQFANKNSKVNSYLVSAVNEQSGIPTVASYIANDNFILQNEGNNVGMLQLNGIMNLNPDVQVQSMPLQQLDLMEGSSLAHLDQGLFTNYALNETKEKVTVNCDVCHKSYNSKDVLRKHKKIHDRRKEFQCGKCNKGFTSNDSLNKHMQLHSGHRPFSCQHCANSFTNEGNLKTHMRR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-