Dcer021152.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dascillus cervinus
Gene Symbol
-
Assembly
GCA_949768715.1
Location
OX458320.1:22861420-22870908[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 1.2 79 5.1 6.3 1 19 95 113 95 113 0.98
2 25 0.17 11 7.8 4.2 2 23 176 197 175 197 0.96
3 25 0.00025 0.017 16.7 1.8 1 23 203 225 203 225 0.98
4 25 0.24 16 7.3 4.1 2 23 260 281 259 281 0.97
5 25 0.00012 0.0082 17.6 0.6 1 23 287 309 287 309 0.99
6 25 0.0028 0.19 13.4 1.6 1 23 315 337 315 337 0.98
7 25 0.002 0.13 13.8 1.9 1 23 343 365 343 365 0.98
8 25 8.1e-07 5.3e-05 24.5 1.1 2 23 372 393 371 393 0.97
9 25 6.1e-07 4e-05 24.9 0.5 1 23 399 421 399 421 0.98
10 25 4.5e-07 3e-05 25.3 0.4 1 23 427 449 427 449 0.99
11 25 0.22 15 7.4 1.4 8 23 566 581 565 581 0.95
12 25 2.4e-05 0.0016 19.9 1.3 1 23 587 609 587 609 0.99
13 25 0.0012 0.078 14.6 2.7 1 23 615 637 615 637 0.99
14 25 0.0028 0.18 13.4 0.6 2 23 644 665 644 665 0.97
15 25 3.2e-07 2.1e-05 25.8 1.9 1 23 671 693 671 693 0.99
16 25 9.4e-06 0.00062 21.2 0.6 1 23 699 721 699 721 0.98
17 25 2.8e-07 1.9e-05 26.0 2.1 1 23 727 749 727 749 0.99
18 25 1.2e-06 8.2e-05 23.9 1.1 1 23 755 777 755 777 0.99
19 25 0.00086 0.057 15.0 0.8 1 23 783 805 783 805 0.99
20 25 0.0028 0.18 13.4 6.8 1 23 811 833 811 833 0.99
21 25 2.5e-06 0.00017 23.0 0.8 1 23 839 861 839 861 0.99
22 25 3.3e-05 0.0022 19.4 1.2 1 23 867 889 867 889 0.99
23 25 0.24 16 7.3 8.4 1 21 895 915 895 917 0.95
24 25 0.0025 0.16 13.6 4.4 1 23 923 946 923 946 0.98
25 25 5.8e-06 0.00038 21.8 1.4 1 23 952 974 952 974 0.99

Sequence Information

Coding Sequence
ATGGATTTAACTTCGTCAATATCTGATGTCGATAAATCAGGGGattttttatcaaatgaaGAAAGCGATGCAGTACAAAGGAATTCGACTGCCGTCCAGGCGGATACGAACCTTCCCAAAATAAACGAGGGGGACATTGAAGAGTTACGTTATACTAATCTTGTGATTCCTCTGGAAGCAAACAAATCCATCTCCACTCAACTAAAGAATTTAGTACAAGCAAGTCCAAGTGAAGATCACGCTGTAGCAGGACCATCCAATACATCGAATCTTCGAGAATCATTTACATGCAATACCTGTAAATGCTGCTTCTTCGATAACATTGGACTAAAACGACATGACTTGTGGGCAAGACGCGAGTGTACGGAATGCCAAGTATGTTTTCACAGCAAATCTGAGTTTCACTTTCATTTCACTGCTCATTCCGGCAAGAAACTCTTTAAATGTCACCATTGTACAAATCgttatttttgtaagaaaGACCTCTGCAAACATCTTGTGGCTCATAACAGAGCGAATTATTTAGAATGTCGGCTTTGCAAGAACAGATTTTTCCATGAAAAATCCTTCAAAGCTCACATGAAACTACATATAGACAGGAAGCCTTTTAAATGCAAGTTTTGTGACGAAAGATTCTCCAGAAACGCTGAACGCAAAAGTCATATAGTAACTCATACAGGCGAGAAGCTGTTTCAATCCACCTTTTGTGATAAAAAGCATTCCCATAACTATAATCTCTTAGCACACACGTTCATTCGAAAAGCCGGGAAATCTCtaaaatgtacaatctgcaggaagaaaattttgtcCAAGTGTAATCTTAAAATCCATTTGAAAACACATGCCGAagaaaaatcatttgaatgtAACGTCTGCAAAGGGAGGTTTTCGGAGGAGCGCCAACTTAAGGTTCACATTAGAACACATACGGTAGAAAAACCGTTTGAATGTAAAGTctgtaaaaagaaattattgacgAGGAAGACTCTGAATGTGCACATGAGGATACATACCGGTGAGACACGATACGAATGTAAGATCTGTAAGAAAAGATGTTTGACCAACGGCCAGCTGAAAGTGCACATTATATCTCATACCGGAAAGAAACCATCTGAATGTGAAGTCTGTAAGAAGAGCTTTTCGACGAGGAGAGAGCTAAACGTGCACATGAGGTCTCATACAGGTGAGAAGCCATATGAATGTAAAGTCTGTAAGAAGAGATTTTCGACGAGCGGAGGGCTGAACGTGCACATGAGAGCACATACGGGTGAGAGACCATATGAATGTATGGTCTGTAGGAAGGCATTTTCGACCAGCGGCAACCTAAATGTGCACATGAGATCTCATACCGGGGAGAAGAGGAACTTTGATTCTACTTTAATTGCCGCCAATGTTAAACCAATAATGGATTCTGAATATTATGAGCAAGATAAAGTTTTGGTAAATGATTCACAAAAAAAGATTGTGACATCTGTCGTCCAAACGAATTCCGACCTCAATGCCCCAGGTCCATCCACCGCACCTTCTACTTCAGGAACGTTTGGATCCCATGATTTAAGGGATCTTTTAGCAAATGAAGGAAGTGATGTTATACAAGAAAATCCTGTAGGTGCCGTCCAAGAGGATAAGGGATTGCCCTTCAAAGGTGAACTCAAAAGCCGCACGGTGACTGATACTAAGGggagaaattttaaaaaaagctttATTCTAAAATATCAGTTCACAAGACACATGTCCACTCATATGGAAGAAAACCCATATGAATGTACGGTCTGTAAGAacagattttcgacaaattgGAGCATGACTGTGCATATGAGGACTCACACCGGAGAGAGACCATATGAATGTGAAGTCtgtaagaaaaaatatttgaccaAGGGCCACCTAAATGTCCACACGAGATCTCATACCGGTGAGAGACCAAATGAATGTAAAGTTTGTATGAAGAGATTTTTGACGAAGGGAGATCTGATAGTGCACATGCGGACTCATACCGGTGGGAGACAATATGAATGTAAAGTTTGTAAGaagagattttcgacaaactGGAACATGACTGTGCATATGAGGACTCATACCAGAGAGAGACCATATGAATGTGAGGTTTGTAAGAAGAGATTTTCGCTGAATGAAGAACTGAAAGTGCACATGAGCTCTCATACTGGAGAGAGACCATATGAATGTAAAGTTTGTAAGAAGAGATTTTCGAGAAACTGGAACATGACTGTGCATATGAGGACTCACACCGGAGAGAGACCATATGAATGTGAGGTTTGTAAGAAGAGATTTTCGCAGAAGGAAGTGCTGAAAGTGCACATGAGATCCCATACTGGAGAGAGACCATATGAATGTAAAGTTTGTAAGAAGAGACTTTTGACGAAGGGAGATCTAAATGGGCACATGAGGACTCATACCGGTGAGAGACCATATGAATGTAAAGTTTGTAAGAAGagatttttgaaaaagcaCCACCTGAATGTGCACTTGAGATCCCATACCGGTGAGAGACCATATGAATGTGAGGTTTGTAAGAAGAGATTTTCGCAGAAGGAAGTGCTGAAAGTGCACATCAGATCCCATACTGGAGAGAGACCATATGAATGTAAAGTTTGTAAGAAGAGATTTTTGACGAAGGGAGATCTGAATGGGCACATGAGGACTCATACCGGTGAGAGACCATATGAATGTAAAGTTTGTAAGAAGagatttttgaaaaagcaCCACCTGAATGTGCACTTGAGATGCCATACCGGTGAGAGACCATATGAATGTGAGATTTGTAATAAGAGATGTTTGACCAAGAGCCACCTAAACCTGCACGTGAGAAGTTCTCATACCGAAGAGAGGCCATATGAATGTAGAGTTTGTAAGaagagattttcgacaaactGGGACATGAATGTGCACATGAAGACTCACGCCAGTTAG
Protein Sequence
MDLTSSISDVDKSGDFLSNEESDAVQRNSTAVQADTNLPKINEGDIEELRYTNLVIPLEANKSISTQLKNLVQASPSEDHAVAGPSNTSNLRESFTCNTCKCCFFDNIGLKRHDLWARRECTECQVCFHSKSEFHFHFTAHSGKKLFKCHHCTNRYFCKKDLCKHLVAHNRANYLECRLCKNRFFHEKSFKAHMKLHIDRKPFKCKFCDERFSRNAERKSHIVTHTGEKLFQSTFCDKKHSHNYNLLAHTFIRKAGKSLKCTICRKKILSKCNLKIHLKTHAEEKSFECNVCKGRFSEERQLKVHIRTHTVEKPFECKVCKKKLLTRKTLNVHMRIHTGETRYECKICKKRCLTNGQLKVHIISHTGKKPSECEVCKKSFSTRRELNVHMRSHTGEKPYECKVCKKRFSTSGGLNVHMRAHTGERPYECMVCRKAFSTSGNLNVHMRSHTGEKRNFDSTLIAANVKPIMDSEYYEQDKVLVNDSQKKIVTSVVQTNSDLNAPGPSTAPSTSGTFGSHDLRDLLANEGSDVIQENPVGAVQEDKGLPFKGELKSRTVTDTKGRNFKKSFILKYQFTRHMSTHMEENPYECTVCKNRFSTNWSMTVHMRTHTGERPYECEVCKKKYLTKGHLNVHTRSHTGERPNECKVCMKRFLTKGDLIVHMRTHTGGRQYECKVCKKRFSTNWNMTVHMRTHTRERPYECEVCKKRFSLNEELKVHMSSHTGERPYECKVCKKRFSRNWNMTVHMRTHTGERPYECEVCKKRFSQKEVLKVHMRSHTGERPYECKVCKKRLLTKGDLNGHMRTHTGERPYECKVCKKRFLKKHHLNVHLRSHTGERPYECEVCKKRFSQKEVLKVHIRSHTGERPYECKVCKKRFLTKGDLNGHMRTHTGERPYECKVCKKRFLKKHHLNVHLRCHTGERPYECEICNKRCLTKSHLNLHVRSSHTEERPYECRVCKKRFSTNWDMNVHMKTHAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-