Basic Information

Insect: Dascillus cervinus
Gene Symbol: -
Assembly: GCA_949768715.1
Location: OX458320.1:4806852-4813635[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 7.7e-05 0.0051 18.3 3.5 1 23 34 56 34 56 0.98

2 29 2.3e-05 0.0015 20.0 1.1 1 23 78 100 78 100 0.97

3 29 2.6e-07 1.7e-05 26.1 2.8 1 23 106 128 106 128 0.98

4 29 7.5e-06 0.00049 21.5 3.1 2 23 135 156 134 156 0.97

5 29 4.7e-05 0.0031 19.0 4.7 2 23 163 184 162 184 0.97

6 29 2.7e-05 0.0018 19.7 0.6 3 23 192 212 190 212 0.96

7 29 0.00095 0.063 14.9 0.3 2 23 219 241 218 241 0.93

8 29 3.2e-06 0.00021 22.6 1.7 1 23 247 269 247 269 0.98

9 29 0.033 2.2 10.0 0.9 3 23 277 298 276 298 0.92

10 29 5.9e-05 0.0039 18.7 4.7 2 23 304 326 303 326 0.96

11 29 0.0072 0.47 12.1 3.9 1 23 359 381 359 381 0.98

12 29 5.1 3.4e+02 3.1 0.4 1 8 386 393 386 402 0.93

13 29 0.2 13 7.5 0.2 8 21 420 433 413 434 0.88

14 29 4.3e-05 0.0029 19.1 3.2 1 23 441 463 441 463 0.98

15 29 0.00023 0.015 16.8 2.0 1 23 487 510 487 510 0.95

16 29 0.0001 0.0068 17.9 3.6 2 23 517 539 516 539 0.95

17 29 0.00039 0.026 16.1 5.0 1 23 545 567 545 567 0.96

18 29 3.2e-05 0.0021 19.5 1.5 1 23 573 595 573 595 0.98

19 29 5.2e-05 0.0034 18.8 3.8 1 23 601 623 601 623 0.98

20 29 0.00014 0.0096 17.4 5.6 1 23 629 651 629 651 0.97

21 29 0.003 0.2 13.3 6.8 1 23 657 679 657 679 0.97

22 29 0.00017 0.011 17.2 1.5 1 23 685 707 685 707 0.96

23 29 3.3e-06 0.00021 22.6 1.3 1 23 713 735 713 735 0.98

24 29 2.3e-06 0.00015 23.1 2.9 3 23 743 763 741 763 0.98

25 29 0.00047 0.031 15.8 0.6 2 23 770 791 769 791 0.96

26 29 0.0058 0.39 12.4 1.3 2 23 798 820 798 820 0.91

27 29 4.9e-06 0.00032 22.1 6.0 2 23 827 848 826 848 0.96

28 29 0.00014 0.0091 17.5 0.6 2 23 855 877 855 877 0.95

29 29 3.4e-06 0.00023 22.5 0.6 2 23 884 906 883 906 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	7.7e-05	0.0051	18.3	3.5	1	23	34	56	34	56	0.98
2	29	2.3e-05	0.0015	20.0	1.1	1	23	78	100	78	100	0.97
3	29	2.6e-07	1.7e-05	26.1	2.8	1	23	106	128	106	128	0.98
4	29	7.5e-06	0.00049	21.5	3.1	2	23	135	156	134	156	0.97
5	29	4.7e-05	0.0031	19.0	4.7	2	23	163	184	162	184	0.97
6	29	2.7e-05	0.0018	19.7	0.6	3	23	192	212	190	212	0.96
7	29	0.00095	0.063	14.9	0.3	2	23	219	241	218	241	0.93
8	29	3.2e-06	0.00021	22.6	1.7	1	23	247	269	247	269	0.98
9	29	0.033	2.2	10.0	0.9	3	23	277	298	276	298	0.92
10	29	5.9e-05	0.0039	18.7	4.7	2	23	304	326	303	326	0.96
11	29	0.0072	0.47	12.1	3.9	1	23	359	381	359	381	0.98
12	29	5.1	3.4e+02	3.1	0.4	1	8	386	393	386	402	0.93
13	29	0.2	13	7.5	0.2	8	21	420	433	413	434	0.88
14	29	4.3e-05	0.0029	19.1	3.2	1	23	441	463	441	463	0.98
15	29	0.00023	0.015	16.8	2.0	1	23	487	510	487	510	0.95
16	29	0.0001	0.0068	17.9	3.6	2	23	517	539	516	539	0.95
17	29	0.00039	0.026	16.1	5.0	1	23	545	567	545	567	0.96
18	29	3.2e-05	0.0021	19.5	1.5	1	23	573	595	573	595	0.98
19	29	5.2e-05	0.0034	18.8	3.8	1	23	601	623	601	623	0.98
20	29	0.00014	0.0096	17.4	5.6	1	23	629	651	629	651	0.97
21	29	0.003	0.2	13.3	6.8	1	23	657	679	657	679	0.97
22	29	0.00017	0.011	17.2	1.5	1	23	685	707	685	707	0.96
23	29	3.3e-06	0.00021	22.6	1.3	1	23	713	735	713	735	0.98
24	29	2.3e-06	0.00015	23.1	2.9	3	23	743	763	741	763	0.98
25	29	0.00047	0.031	15.8	0.6	2	23	770	791	769	791	0.96
26	29	0.0058	0.39	12.4	1.3	2	23	798	820	798	820	0.91
27	29	4.9e-06	0.00032	22.1	6.0	2	23	827	848	826	848	0.96
28	29	0.00014	0.0091	17.5	0.6	2	23	855	877	855	877	0.95
29	29	3.4e-06	0.00023	22.5	0.6	2	23	884	906	883	906	0.96

Sequence Information

Coding Sequence: atgcctctgGTAAAAGTGGAACCTTCGAACTGCGAACCCATTGAGGATGAAGACGATACGGCCGACGAACTCTCCGCCACAATTCCAGTTGAACGCAAATTTAAATGCGACATCTGCCGGCGATGCTTCGCTCACAAGCCGTCGCTATGGCGACACCTGAACGGACACAAAAACGGAAAAACCTACAACGAGCATAAAGACAAACTCGTGCGATTTCCTCGCGACAGGCCGTTCGAGTGCCAAGCGTGCGGCAAACGTTTCATGCAAAATTCCCATCTTCAGGCGCACCTTCTGCTCCACGAGGGcaagaaacctttcaaatgcGACCAATGCGACAAATCGTTCACCCAGAACAGCCACCTCAAAGGACATATGTTGGTCCACACCGACACCATGGCGGTCAGTTGCCACTTTTGCgacaaaactttcaaacaaGATTCGTACCTCAAGAAGCACATGTTGGTGCACACCAGCGAAAAATCAGTCGAGTGCCACCACTGTCAGAGGCGGTTCAAGAGGAACATCTATCTTAAGAAGCACATGGCGGTCCACGAGGCTGTGACGCCGGTGCATTGTGGCAAGTGCGAAAAGCCGTTTTCCAACGAAGCGCTGCTCAAGCGGCACATGTTGGTGCACACGGACGAGAAGCCCGTCGAGTGCGACGTCTGCGCGAAGCGCTTTAAGAATAACGCCTACCTCAAGCAGCACTTCATGTTGGTCCATTCCGACCCGACATTGTTTGAGTGCGACACGTGTCAGAAGCGCTTTCGCCGGAGGGTTTACCTTGTCAGGCACATGCAGGTTCACAGGGACGAGGAGTCGGCCAGTTGTTTCCTCTGCAATAGGATTTTCAGGAATAATTCCCGCCTTGCGGAACACAACAAGTTGGTGCATAGCGACGAGAAAATTGAGTGCGAAATTTGTCGGAAGTGTttcaagaataaaatttatctcAAGCACCACCTTCGCAGGGCGCACAAGGTTATGAGGGCGAGTTTGGAAAAGATAAAATTAGAAGAAAGTGAAGAACACATAACCCCACAAACCTCCACTTCGGACCCCGACAGAGACATTTTCAAATGCAACATTTGTCAACAATGTTTCCTACAAATTGCATCGTATAAACGGCACATGTTACGCCACAAGAGTGCCAAACACAAGTGCACCGAATGCGGAAAACTcgcacattttaaaattcacaTACAGAACGACCAAAACTGTCTCGGTGACAAACCATTTTCGTGTGACACTTACCAAAGGTGTTTTGTACGGAAATCCTACCTCAACATTCACTTGCGAGTTTATACCGGCAAACGACCATTTCAGTGCACTGTGTGTCACAGACGGTTCTCAGGAAGTGAGTATCTCAAGCTGCACATGTTGCGCCATGTTGGTGAAAAACGGTTTTTGAAGCGTTCTGAAGTTAAAAAACACTTGGTGGCTCACAGCATGAAACTGTTTCATTGTGACACTTGCCAGAAGAGTTACAAACAAGCCGGTACTCTCAGAAACCATCAATTACTGGTTCACAAGGAGGAAAAACCACTAAAATGTGTCACATGTGGAAAGAGCTGTAAAGATAACGAACACCTCAAACAACACATTAAGTTGGTTCACATTGATTCAAAACTGTTTCAGTGTGACATCTGCCAGAAATGTTTTTCACACATAAAATCTCTTCAAGCCCACAAGTCTCTTCATACCGCCGTCCGAGAGTTTCAGTGTGACACTTGTCACAGGCCTTTTAACACAAAGGACGCTGTAAAAAGGCACATGGTGGTTCATATGGGAGAAAAACCGTTCCAATGTGTCACGTGTCACAAGCAGTTCTCGTTCAAAACTAACCTTACGGTTCACATGTCGGTTCATACCGGTGAGAAACCGTTTTGTTGTGACTTGTGCCAGAAATGTTTCGCCAAAAAAAAGGGCCTTCAACGGCACATGTTGGTCCACACCGGCCAAAAACCGTTCAAGTGCCACTTGTGTGACAAGAGCTTCACGCAGCAGGGTTACCACAAGCAACACATGTTTGTCCATTCAAGTCTGAAACCGTTTCAGTGTGACCGCTGTCAGAAGCGGTTTCCaagcaaattttttcttaaccGACACATAGCTGGCCATGACGTCAAAAAACCGTTTAAGTGCACCGTGTGTGGCAAGTGTTTTGCAGGAAGAACTAACCTCCAAACGCACTTGGCGGTTCACACCGGTCaaaaaccgttcggttgtgaCACCTGCCAGAAGTGTTTTGCAACAAAATCGGATCTTAAACGGCACATGCAGGTTCATACTAGAGTCACATTGCTTCAGTGTGACACCTGTCAACTGAGTTTCAAACGTATATTTGATCTCAAGCAACACATGGCGGAGCACACGGATACAAAACCGGCGAAATGTGACATTTGTCgaagaatttttacaaatgaTTCGTATCTCAGGCAGCACAACAAGTTTGTACATGCAGATCCGAAAGTGGTTCGTTGTGACACCTGTCAGAAATGTTTTTCACGACAGTCTCATCTCAAGAAGCACATGCTAGCGCATAGTGACGAACGGCCGGCAAAGTGTGACATTTGTGGCCAGTCGTATAAGACTAATTCGCGCCTCAGGGAACATGTCAAGTTGGTTCACACCGAATCGGAGCGGCTGGTCTGCGAAATGTGCGAGAAGAGTTTCAAGAATGGTTCTTCTCTCCAGAAACACATTCGGAGGTTGCACAGTGACAAGACTAAAGAACCAGAATTTAGGCAACCCATTTAA
Protein Sequence: MPLVKVEPSNCEPIEDEDDTADELSATIPVERKFKCDICRRCFAHKPSLWRHLNGHKNGKTYNEHKDKLVRFPRDRPFECQACGKRFMQNSHLQAHLLLHEGKKPFKCDQCDKSFTQNSHLKGHMLVHTDTMAVSCHFCDKTFKQDSYLKKHMLVHTSEKSVECHHCQRRFKRNIYLKKHMAVHEAVTPVHCGKCEKPFSNEALLKRHMLVHTDEKPVECDVCAKRFKNNAYLKQHFMLVHSDPTLFECDTCQKRFRRRVYLVRHMQVHRDEESASCFLCNRIFRNNSRLAEHNKLVHSDEKIECEICRKCFKNKIYLKHHLRRAHKVMRASLEKIKLEESEEHITPQTSTSDPDRDIFKCNICQQCFLQIASYKRHMLRHKSAKHKCTECGKLAHFKIHIQNDQNCLGDKPFSCDTYQRCFVRKSYLNIHLRVYTGKRPFQCTVCHRRFSGSEYLKLHMLRHVGEKRFLKRSEVKKHLVAHSMKLFHCDTCQKSYKQAGTLRNHQLLVHKEEKPLKCVTCGKSCKDNEHLKQHIKLVHIDSKLFQCDICQKCFSHIKSLQAHKSLHTAVREFQCDTCHRPFNTKDAVKRHMVVHMGEKPFQCVTCHKQFSFKTNLTVHMSVHTGEKPFCCDLCQKCFAKKKGLQRHMLVHTGQKPFKCHLCDKSFTQQGYHKQHMFVHSSLKPFQCDRCQKRFPSKFFLNRHIAGHDVKKPFKCTVCGKCFAGRTNLQTHLAVHTGQKPFGCDTCQKCFATKSDLKRHMQVHTRVTLLQCDTCQLSFKRIFDLKQHMAEHTDTKPAKCDICRRIFTNDSYLRQHNKFVHADPKVVRCDTCQKCFSRQSHLKKHMLAHSDERPAKCDICGQSYKTNSRLREHVKLVHTESERLVCEMCEKSFKNGSSLQKHIRRLHSDKTKEPEFRQPI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -