Dcer021678.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dascillus cervinus
Gene Symbol
-
Assembly
GCA_949768715.1
Location
OX458320.1:26408038-26413253[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 1.6e-05 0.001 20.5 0.3 1 23 674 696 674 696 0.98
2 21 0.0008 0.053 15.1 5.8 1 23 707 729 707 729 0.97
3 21 3.8e-05 0.0025 19.3 1.5 1 23 735 757 735 757 0.98
4 21 1.2e-07 8.1e-06 27.1 0.7 1 23 763 785 763 785 0.98
5 21 1.1e-05 0.00075 20.9 1.2 1 23 791 813 791 813 0.97
6 21 0.00032 0.021 16.3 3.5 1 23 819 841 819 841 0.97
7 21 2.4e-06 0.00016 23.1 0.3 1 23 847 869 847 869 0.98
8 21 1.7e-05 0.0012 20.3 2.4 1 23 875 897 875 897 0.98
9 21 0.00011 0.0073 17.8 0.5 1 23 903 925 903 925 0.98
10 21 3.9e-07 2.6e-05 25.5 1.5 1 23 931 953 931 953 0.98
11 21 1.1e-06 7.6e-05 24.0 0.3 1 23 959 981 959 981 0.98
12 21 5e-05 0.0033 18.9 1.1 1 23 987 1009 987 1009 0.98
13 21 5.6e-07 3.7e-05 25.0 2.5 1 23 1015 1037 1015 1037 0.99
14 21 5.6e-07 3.7e-05 25.0 0.3 1 23 1043 1065 1043 1065 0.98
15 21 4.3e-06 0.00028 22.2 0.4 1 23 1071 1093 1071 1093 0.98
16 21 1.6e-05 0.001 20.5 3.1 1 23 1099 1121 1099 1121 0.98
17 21 4.5e-06 0.00029 22.2 0.3 2 23 1128 1149 1127 1149 0.97
18 21 1.6e-05 0.0011 20.4 0.8 1 23 1156 1178 1156 1178 0.98
19 21 0.00015 0.01 17.4 0.4 1 23 1184 1206 1184 1206 0.97
20 21 1.8e-05 0.0012 20.2 0.5 1 23 1212 1234 1212 1234 0.98
21 21 3.5e-07 2.3e-05 25.7 1.8 1 23 1240 1262 1240 1262 0.98

Sequence Information

Coding Sequence
ATGAAATGCAGGATGTGCAATATTGAAAAGGagttaaaattaagtaatgaTACGGAAATTGATATTAACTCATCAGTTGCTCTGGCTGCGATATCCTCTGGTACTGGTTACACTGCAGTTGAGGAAATTTTATCTGTTTTAAATGTACCGTTTATGTCTCCCAAAACATATCAGCATCATCAAAATAGTGTATCAGAGCAGATATATTCCACTGCTTTGACTTCAATGAAAGAAGCAGGAAAGGAAGAAGCAAGGTTAGCCTTAGAGTTAGGTGAAGTAGACAAGGACAATATTCCTTACATCACGGTAATTGCTGATGGAACGTATTCTAAACGGTCCTATAACGTAAATTATAATGCAGCCTCGGGAGCGgCTTGCATTATTGGTCAAAGGACAAGAAAACTTCTGTATTTAGGTATTAGGAATAAATACTGCTGTGTTTGTGCCCAAGCACAATCGAAACATAATATGGAAGAAATACCTGATCACCAATGTTTTCTCAATTGGCAAGGAACTTCAACAAGCATGGAATCTGACATAATTGTCGAGGGCTTTAGACAAAGTTTGAAAATGCATGGCATTAAGTATTTCAAACTTGTTGGAGATGGTGATAGCAGTGtccataaaaaattgattgaagcTCGCCCTTACGGAAATACTCTtgtgcaaaaaattgaatgtaaaaatcatttattgcGCAATTTTTCAAAGAAGTTGAGAGAAATTTGCAACAGGAAGCGCAGCAATTCAACGAATATGGCTGTGGCACCTTCATTACGAAAAATCGTTGAAAACAATTCAGGACGACTTAGGGTGGCTATCTCTAAATCCATTGCACATAGGCGAAATCaagataatattttcaatgaaaaaacTTCATTGTTATGCAAAGACTTGAAAAATATCCCCGCACATATATTTGGTGATCATAATATCTGCAGGGAACTAAGCGACTTTTCCTGCATTCCTAAAGAAAATGGCAAAAATGTTGTTCCTGAAATGATTCAGTGTGGGTTATATGAAGATATTCAAATTGTTATCAACCGACTAGTCCACAACGCAGGTAGTCTTCTATTAAATATGGATACAAATTTGGCCGAACGGTACAACTCTatcatttgtaaatttattggcggaaaaagaattaattttactcAGAAAGGCGGTTATGGAGCAAGATGTCACGCTGCAGCTTTATCATTTAATAGTGCTGGGGATTACCATCGTTTAATACATAAAAGTGTCGCAAAGAAAAGCCCTTCAGGTTTCACTAAAAGGTTTATTGAACGAATAAAAAGAAGAGCAAATTACAAGCTTGGCAAGATTAGGAAAAAATTGTTCCGACCTAAACAAAATTACAGTACTGATAAGGACTATGGACCCGAAGCCTCATCTGAACCTGATATTCCTCCAGAAATATTTGAAAGAAGGAAGAGTGACCTATtaaaagatattaaaaaaacttctGGAGAAATCAGACTGTTAGAAGAGAGTACTAGGGGCCAGAGTGCCAACGAAACTTGGAAACAAGAGCGAGCTCTACGTCTCACTGCTTCGAATTTCGGAGAAATTTGTAAGATGAGGAAGACGACCTcgtgtcaaaaaattattgaaaaattgttatacTCAAAATTTATGGGGAATGAACATACAAAATATGGATCAGACCATGAGTCTCTGGcaataaatcaatttgaaaatgaatttaaagtaACAGTCAAGTCTTGTGGTTTATTTATTGATGAGGAATACTTCATGCTCGGTGCAAGCCCCGACGGCCTTGTAAACGATGACTGCATAGTTGAGgTCAAAGCGGAACCCTCCCAATATAACGACGAATTCAATTCCAAGGACACGATCACaccaacaacaacaaattatgaactacAAACGAATTTGAAGGAAGAAGGTGCAATTTTGCACTTTTGTTCCACCTCCGACCAAGaggaaattaaaatcgaaaagTGCGAACTAAACTTTGACTTGGATTCATCAGACAAGTTCCTCGAAATATTGCAGCACGAGTGTGGCGAGTGTGGAAGATATTTTTCTGACAACGGCCAACTTGAAGAACACTTACTAACCCACACGCTTGATGCGTATGAAGGCGACAGCCGTTATCAGTGCAAGCAATGCAATCAAGTGTTTAGACTAAAGTGCAATCTAAAGCAACACATGTCGTTTCACGGCAAAGAAAGGCGCTTTAAGTGCAAAGTGTGCAATCAAGTTTTTCATCAAAACGCCGGTCTTAAATCGCACATGTTGGTTCACAAAGGACAGAAACCGTTTGAATGCAATGTGTGCAATAAAGCTTTTGCTCAAAAACGCAATCTTAAACGCCACATGTTGGTTCATAGAGCAGAGGCGCCCTTTAATTGCACCGAGTGCAACAGGGGTTTCACATCAAAGAACAATTTTAATGtgcacatgttaattcataaCAGGGAGAAGCGCTTCAACTGCCATTTGTGCAAGAAAACCTTCAGCCTTCGCAAGAGCCTCCAAATGCACATTTTGGTCCACAAAGGAGAGGCGCCCTTTAAATGCGAACTGTGCAATAAGGGTTTCGCATCGAGGAGCAATCTTAATGTGCACTTGTTAATTCACACCAAGGACAAACCCTTTAAATGCCACTTGTGCGAAAAAAGCTTCACCCTTCGCAGGAACCTCCAAATTCACATTTTAGTTCACAAAGGAGAGAGGCCCTTTAAGTGCAATGTGTGCAATAAAGCCTTCACGGACACCGGCAACCGTGGtaagcacatgttgattcattcAGGCGAGAAGCCCTTCAAATGTCACGTTTGTAACAAGGCTTTTGTGACAAACAGTAACCTCAAAGGGCACATGTTGGTTCATAACGACGAGGGAACCTTCGAATGCAAGGTGTGCGGTAAAACCTTCAAGCAACCGCGCGGCCTCGATCAGCACATGATGATCCATAAGGAcgaaaaaaacttcaaatgtGACTTGTGCGATCAAGCTTTCAACCACAACAACAGCCTCAGAGTGCACCTGCTGGTTCACAGGGGCGAGAAACCTTACAAGTGCAATCTGTGCGATAAAGCTTTCATAAACAAGTGCAACCTCAATCGGCACATGTTGGTCCATAAAGGCGAGAAACCCTTCAAATGCGAGGTGTGCAATAAAGCTTTCACCGATAAGGGCAATCTCGGTAAGCACATGTTGATCCACACGGGCGAGAAACCTTATAAATGCAACGTGTGCGGTAAAGCTTTTCAACAAAACCGCAGCCTGACCATACATTTGCTGATCCACAAGGGCGAGAAATCTTTCGTGTGCCACGTGTGCGGTAAAGCTTTTTCTTTCACCATGCACCTCAAATcgcacatgttaattcatcaAGAAAAAGGCACATTGAAATGCGACCAATGCGATAAGGTTTTTAGTCGAGCCGACACTCTCGGAAGGCACCTATTAACTCACACTAACAGAGGGAAAGCTTTCAAATGTGATATATGCGATAAAGGTTACACACTTAACAGCCAACTCAATCGCCACAAGTTAGTTCATAGTGACGAGAGACCCTTTAAATGTCAAGTTTGTGGTAAAGGTTTCAGAGAAAGTGGCAGTCTTAAAGGACACAAGTCGGTTCATACTGGCGAGAGACCTTTTGAATGCGAAGTGTGTAATAACACGTTTGCAGCAAAAAGCAGCCTCACAAAGCACATGTTGACGCATAGTGGCGAAAAACCGTTTAAATGTCCCTTGTGTGGTAAAGGTTATACGCAGAGGCATAATCTCAAGAATCACATGTTGGTTCATAAGGGCCAAGAATCGTCTGAAATCAAAGAAGAGCAAATAACCTCgtaa
Protein Sequence
MKCRMCNIEKELKLSNDTEIDINSSVALAAISSGTGYTAVEEILSVLNVPFMSPKTYQHHQNSVSEQIYSTALTSMKEAGKEEARLALELGEVDKDNIPYITVIADGTYSKRSYNVNYNAASGAACIIGQRTRKLLYLGIRNKYCCVCAQAQSKHNMEEIPDHQCFLNWQGTSTSMESDIIVEGFRQSLKMHGIKYFKLVGDGDSSVHKKLIEARPYGNTLVQKIECKNHLLRNFSKKLREICNRKRSNSTNMAVAPSLRKIVENNSGRLRVAISKSIAHRRNQDNIFNEKTSLLCKDLKNIPAHIFGDHNICRELSDFSCIPKENGKNVVPEMIQCGLYEDIQIVINRLVHNAGSLLLNMDTNLAERYNSIICKFIGGKRINFTQKGGYGARCHAAALSFNSAGDYHRLIHKSVAKKSPSGFTKRFIERIKRRANYKLGKIRKKLFRPKQNYSTDKDYGPEASSEPDIPPEIFERRKSDLLKDIKKTSGEIRLLEESTRGQSANETWKQERALRLTASNFGEICKMRKTTSCQKIIEKLLYSKFMGNEHTKYGSDHESLAINQFENEFKVTVKSCGLFIDEEYFMLGASPDGLVNDDCIVEVKAEPSQYNDEFNSKDTITPTTTNYELQTNLKEEGAILHFCSTSDQEEIKIEKCELNFDLDSSDKFLEILQHECGECGRYFSDNGQLEEHLLTHTLDAYEGDSRYQCKQCNQVFRLKCNLKQHMSFHGKERRFKCKVCNQVFHQNAGLKSHMLVHKGQKPFECNVCNKAFAQKRNLKRHMLVHRAEAPFNCTECNRGFTSKNNFNVHMLIHNREKRFNCHLCKKTFSLRKSLQMHILVHKGEAPFKCELCNKGFASRSNLNVHLLIHTKDKPFKCHLCEKSFTLRRNLQIHILVHKGERPFKCNVCNKAFTDTGNRGKHMLIHSGEKPFKCHVCNKAFVTNSNLKGHMLVHNDEGTFECKVCGKTFKQPRGLDQHMMIHKDEKNFKCDLCDQAFNHNNSLRVHLLVHRGEKPYKCNLCDKAFINKCNLNRHMLVHKGEKPFKCEVCNKAFTDKGNLGKHMLIHTGEKPYKCNVCGKAFQQNRSLTIHLLIHKGEKSFVCHVCGKAFSFTMHLKSHMLIHQEKGTLKCDQCDKVFSRADTLGRHLLTHTNRGKAFKCDICDKGYTLNSQLNRHKLVHSDERPFKCQVCGKGFRESGSLKGHKSVHTGERPFECEVCNNTFAAKSSLTKHMLTHSGEKPFKCPLCGKGYTQRHNLKNHMLVHKGQESSEIKEEQITS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-