Dcer008538.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dascillus cervinus
Gene Symbol
RREB1
Assembly
GCA_949768715.1
Location
OX458317.1:30083306-30092775[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 44 0.0033 0.22 13.2 0.3 2 23 8 29 7 29 0.94
2 44 0.028 1.9 10.2 1.3 1 23 35 57 35 57 0.98
3 44 0.46 31 6.4 6.0 1 19 63 81 63 86 0.89
4 44 5e-05 0.0033 18.9 3.0 1 23 91 113 91 113 0.97
5 44 0.00011 0.007 17.9 3.6 1 23 123 145 123 145 0.98
6 44 6.6e-06 0.00044 21.6 0.4 1 23 152 174 152 174 0.98
7 44 8e-06 0.00053 21.4 0.1 1 23 180 202 180 202 0.98
8 44 6.8e-07 4.5e-05 24.8 3.9 1 23 208 231 208 231 0.97
9 44 0.011 0.7 11.6 1.7 1 23 249 271 249 271 0.96
10 44 0.0018 0.12 14.0 1.0 2 23 277 298 276 298 0.95
11 44 0.017 1.1 10.9 0.5 1 23 304 326 304 326 0.97
12 44 2.4 1.6e+02 4.2 0.5 1 10 332 341 332 344 0.94
13 44 0.038 2.5 9.8 1.3 1 23 372 394 372 394 0.98
14 44 0.0011 0.075 14.6 0.1 2 23 400 421 399 421 0.93
15 44 0.028 1.9 10.2 1.9 1 23 427 449 427 449 0.97
16 44 0.0032 0.21 13.2 1.5 1 23 455 478 455 478 0.96
17 44 0.045 3 9.6 4.9 1 23 483 505 483 505 0.98
18 44 0.022 1.4 10.6 6.3 1 23 515 537 515 537 0.98
19 44 0.00013 0.0085 17.6 0.3 1 23 544 566 544 566 0.98
20 44 7.1e-08 4.7e-06 27.9 1.0 1 23 572 594 572 594 0.98
21 44 0.00018 0.012 17.1 0.2 3 23 602 623 600 623 0.97
22 44 0.15 9.6 8.0 1.6 1 23 667 689 667 689 0.97
23 44 0.0032 0.21 13.2 0.5 3 23 697 717 696 717 0.98
24 44 0.0028 0.19 13.4 0.8 3 23 729 750 728 750 0.95
25 44 0.41 27 6.6 5.0 1 23 760 783 760 783 0.97
26 44 0.019 1.2 10.8 1.3 1 23 789 812 789 812 0.96
27 44 0.0012 0.078 14.6 1.4 1 23 817 839 817 839 0.97
28 44 6e-05 0.0039 18.6 2.4 1 22 985 1006 985 1006 0.96
29 44 1.2e-05 0.00082 20.8 0.8 1 23 1012 1034 1012 1034 0.96
30 44 0.0011 0.072 14.7 2.7 1 23 1040 1062 1040 1062 0.97
31 44 0.0033 0.21 13.2 6.8 1 23 1067 1090 1067 1090 0.98
32 44 0.04 2.6 9.7 6.2 1 23 1095 1117 1095 1117 0.96
33 44 7.8e-05 0.0052 18.3 2.6 1 23 1127 1150 1127 1150 0.98
34 44 0.043 2.8 9.7 0.0 2 21 1157 1176 1157 1177 0.95
35 44 0.00091 0.06 14.9 0.4 2 22 1213 1233 1212 1233 0.95
36 44 0.00029 0.019 16.5 0.8 1 23 1239 1261 1239 1261 0.96
37 44 0.00024 0.016 16.7 1.6 1 23 1267 1289 1267 1289 0.98
38 44 0.042 2.8 9.7 10.1 1 23 1294 1317 1294 1317 0.98
39 44 1.5e-06 9.6e-05 23.7 2.2 1 23 1322 1344 1322 1344 0.99
40 44 0.0024 0.16 13.6 4.9 1 23 1354 1377 1354 1377 0.98
41 44 1.3 84 5.0 0.0 2 23 1384 1405 1384 1405 0.92
42 44 4.1e-06 0.00027 22.3 0.3 1 23 1411 1433 1411 1433 0.97
43 44 3.2e-05 0.0021 19.5 1.4 1 23 1439 1462 1439 1462 0.95
44 44 0.0087 0.57 11.8 3.1 1 23 1468 1491 1468 1491 0.92

Sequence Information

Coding Sequence
ATGCATAAAGAACGCACCATCCCTTGCAAGCAATGCGGCAGAAAATTTCGATTTGaatatgaagttaaaaaacATGAAGCGATACACGCAGAAACCAGAAGTTATTGTTGCGATATTTGTCCGGCTAAATTTAAACTGAAAGAATCGCTGATTCCTCATCAAAAACGCCACAATGGCGAATTAAAGTTTAAGTGTGAACAATGCGATcgtagatttttttttaaaaaacagtaCGAGAATCATTGCGACACCGAGCATAAAGGCGTCACTTATGCATGCACAGTTTGTGGTAAGAAATTTAAACATAAGGATTATTGGAAGAAGCACGAAGAAACGCACGATTCCAATTTTGTGACACAAGACAGATTCAAGTGTACTGAATGTGATAGAAGCTTTTACTATAAAGCTCGTCTGACTCAGCACATGAAGTTTCACACGGCTGAAAATCGGTCGtttatttgtgaaatttgcGGTAAGAATGTGTCGTCGCTAAGTAGCTTGCAGAATCATACAAGGACCCATAGTGGGGAGAGGCCTTATTCTTGTTCAATTTGTGGAAAggcttttaataaaaacagcgCGTTAGGATTGCACCTTCGAGTTCATACTAAGGAAAAGCCTCATGTTTGCAGTCACTGTGACAAATCTTTTAGTCAACGTAGTTCTCTCACTGTTCACATTCGTTCTTTACATACTGGGGAACGCCCTTATCAATCTCCGAATCTGGCAAGTGAATCAAATGTCCACATTTGCAAAGCTTGCGGAAAAGAATTTGACAGCCTCAAGAAATACATTAAACATGGAAGAATGCACAAAGATCTGACCATTCCTTGTAAACATTGCAGCAAAAAATTTCGAGCCAACTGGGAACTGAAAAATCATGCAATCATGCACACCGAAAATAGAAATTATCGTTGCGACGTTTGTCCGGCTACATTTAAACTGAAAAATAGGCTCGTTGTCCACAAAAAGCTCCACAGTGGCGAATATAATTTCAAATGTGAAGTGTGCGGTCGTACATATCTCGATAAAAGGCTATGTGTCTCCTTGCTTAATCAAATTACTCCAATAAAACCCCCAACAGCGCCGAATCTGGCAAGTGAATCAAATGTCTACATTTGCAAAGCTTGTGGAAAGCAATACGACAGCTTCAAGAAATATATCAAACATGGAAGAATGCACAAAGAACCGACCATTCCTTGTAAACAATGCGGCAAAAAATTTCGAGCCAACTGGGAACTGAAAAACCATGCAGTTGTGCACATCGAAAGTAGAAATTATTGTTGCGACGTTTGTCCGGCTACATTTAAACTGAAGAAAAGGCTTCTTGCCCACAAGAAAATCCACAACGGCGAATACAACTTTAAATGTGAAGTGTGCGGTCGTACATTTCTCGATAAAAAGTCGTTTGAAAATCATTCCAAGTCTGAGCATAAAGGTGTCATGTATGTTTGTCAAATttgcgaaaaaaaatttaaaagtgagACCTATTGCAAGAAGCACGAACAAACCCACGATTCCAATTTTGCAGCAAGAAAGACGCACAAGTGTACGGAATGCGATAAAAGCTTTTACTTTAAGGAACGTCTGACTTTTCATATGAAGAGGCACACGAATGATAATCGATCGTTTATTTGCGAAATTTGtggaaaaaatgttacatCTTTGGAAGGCTTACGGTACCACAGAAGGACCCACACTGGCGAAAAACCTTACTGTTGTCCGGTTTGTGGAAAGACTTTTAGCAGGGAGGAGGCGCTAAGAAAGCACATTCGAGTTCATACTAAAGAAAAACCATACGGTTGTGGTTACTGCGAAAAATCTTTTACTCAAAGAACTCCTCTAATGATTCACATTCGATCCATACACACTGGGGAACGTCCTTATCAGTGTGTTGTTTGTATGAGAAAATGTCCTTCAAATATCAGAAATGAAGGATTGACGCAAGGAAACGTCCAGAAGCAAGTAATAAAAGCTCCTTCAGTCGTTCTCCTAGGATATTTTTGTTCTATCTGCAAAGTCTATCTCTCAACAAAAGATGAATATAacattcacaaaaaaaatcatgaaGAACTTAAATCTAGGCTATGCGAAATTTGCGGAGAATTGTTTGCAACATTGTCTCGCTTTAAGACCCACATGAAGCAACATCCAGAAGCCAGTGATCTCAAAAATCGTCCTAACTGCTCCGTTTGCGGCAATACTTTTTCTTCTGAGAAGTACCTAAAAtctcatttcaaaattgtgcATTTGAAGAAAAAGACCAATGGAGGGGCGCACTCATGCCGTCATTGCGATGGTCGGTTTCCGTCGAAGCAAGCTCGTAGCAAACACATTAGAAGATATCACAATAACGCGCTTGAGTTTACTTGCAATATTTGCAAACAGAAAATTACCACGAAGGTCTTATTCAATTTGCATCAGAAGGAAGAACATATGGGGATGCGATACGAAtgcaaattttgcaataaactGTTTAAGGAGTCGTCGAATTGGAAACAGCATGAATTAGTTCACGATCCTTCATTTGTGAGAAAAAAACGTGTTGAGCTACCTGTTATATTTCCCGTGGAAGTCCAGAATAGGCGCGTCACAAGAAGTTCTGTCGTAGAAAGAGTTGAAGTCGGTAAAGAGGTAAAGCAGAACACTCGAAAGAACAAGACCACTACTGAAGAAGTGTATAAGtctgaagaaattttaaaattcgatAAAGAAATGGATGAAGAAGTTTCAAACGTGCACAAGAAGGAACCTGAGCAAAAGAAAAAAGCTACTCTTGTGCGAAAGAATGTTTTAACGAAACGAAATATTGAAGAGGCCAGTGTGCAAACGATAAAAgttgaaagaagaaaaatgaaGAGCAATCCGTCCAAGAATGAGTCTAAAAACGAGGAAAAGCAAACCGTTGATAAGAGGGTGGAAAATACAGAAACTGACGAAAAACCCAAACAATTTATATGCAACAACTGCAACAAAACATTTCCAAACAGACGTAACTTCCACGCTCACATGCGGAAATATGGCGAAAAGAAACACGCCTGTCCAACTTGCGGCAAAAGGTTCAATCAAATGTGGAACCTCAAGACTCACATATTGGTGCATACGAATGAAAAGAATTTTGAATGCGAATTCTGCGAGAGGAAATTCAAAACACCACAGTGCCTTAAGGTTCATTTAACGGTTCATAGTGAATGCaaatttaagtgtcaatattGCGATAACGCTTATCGCACCAAGGAACACTACAAGCATCATTACCAAACAGCTCATTTGGGCCTACTTCATAATTGTAAGAGTTgcgatagaaaatttaaagatcGTCGTTCTTTCAAACTCCATGAAAAAAGCCACGAACCTGGTTATGTGGATGTTAAAGCTTTTAAATGTTCTACTTGCGGAATTTCTTTCCGGGATATGAGTAAGTTTAATGATCATCAAAGGCGACGTCATGCTGATGGTTCAAAACGGGTCTGCGAAGTTTGTGGCAAAAGCTTGAGTTCCGGTATGAGTTACACCGAACATATGAGATTGGCAAAACAGCGAAAGAAAGGATTAAAGAAAAAGGAAACTGATCAATCGGATGTGCGAAAAAAGGAACGTAAAGAAAACAAGACTGATGAAAAATCGAAAGAAGTTGTATGCAACAATTGCAATAAAACCTTCGCAACGAAACGCGTACTGTTGTATCATATGCGTAAATACCGTGAAAAGAAACACAGCTGTGCAACTTGTGGCCGGAAGTTTGGGCAAATATCCAACCTCAAAGCTCACACGTTGGTCCATACGaacgaaaaaaatttcgaatgtGAAACTTGTCTGAAGCAATTTAAAACGCCGCACAGTCTTAAAGTTCATGTAAACATCCATAAAGAGTATAAATTTAAGTGTGAATTTTGTGATAAAGGTTTTCACACTAATCAACAATTTAAGCATCATCACCAAACTACTCATTTGGGTGTGGTTTACACTTGTAAAACCTGTGGTAAAGCTTTTAAAGACCGGGCTAACTACAAAACCCATGAAAGAACTCACGATCCTGATTATGTAGACATTAAAGCTTTTAAGTGTCATACTTGCGGCTTGGGTTTCAGAAACATGCGTAACTTTAATTATCACCAAATGAGACGCCATAGCGATGGTTCAAAACGGGTTTGTGAAGTTTGTGGCAAGAGTATAACTGTTGGAATTGGTTACGACGAACATATGAGGCTGCATACTGGGGAAAAACCTTACAGTTGCTCTTATTGTGGAAAAAATTTCGCAAGGCGTTCTGGTCTTCGTTTGCACATTGTAGTTCATACGAAAGCAAAACCTCATACTTGTAAATTGTGCGATAAAAGTTTCACCCAACGGACTGCATTAACAATTCACGAGCGAGCTATTCATACGGGTGAGCGACCGTATACTTGTCAGGTGTGTTCCAAAGGTTTCGTCACTAGCACACTATTGAAAACACATTGCAAGAAAGCTCACGGTGTAGCCTCCGCAGATATATTACCAAAGAAGGAACAGgattga
Protein Sequence
MHKERTIPCKQCGRKFRFEYEVKKHEAIHAETRSYCCDICPAKFKLKESLIPHQKRHNGELKFKCEQCDRRFFFKKQYENHCDTEHKGVTYACTVCGKKFKHKDYWKKHEETHDSNFVTQDRFKCTECDRSFYYKARLTQHMKFHTAENRSFICEICGKNVSSLSSLQNHTRTHSGERPYSCSICGKAFNKNSALGLHLRVHTKEKPHVCSHCDKSFSQRSSLTVHIRSLHTGERPYQSPNLASESNVHICKACGKEFDSLKKYIKHGRMHKDLTIPCKHCSKKFRANWELKNHAIMHTENRNYRCDVCPATFKLKNRLVVHKKLHSGEYNFKCEVCGRTYLDKRLCVSLLNQITPIKPPTAPNLASESNVYICKACGKQYDSFKKYIKHGRMHKEPTIPCKQCGKKFRANWELKNHAVVHIESRNYCCDVCPATFKLKKRLLAHKKIHNGEYNFKCEVCGRTFLDKKSFENHSKSEHKGVMYVCQICEKKFKSETYCKKHEQTHDSNFAARKTHKCTECDKSFYFKERLTFHMKRHTNDNRSFICEICGKNVTSLEGLRYHRRTHTGEKPYCCPVCGKTFSREEALRKHIRVHTKEKPYGCGYCEKSFTQRTPLMIHIRSIHTGERPYQCVVCMRKCPSNIRNEGLTQGNVQKQVIKAPSVVLLGYFCSICKVYLSTKDEYNIHKKNHEELKSRLCEICGELFATLSRFKTHMKQHPEASDLKNRPNCSVCGNTFSSEKYLKSHFKIVHLKKKTNGGAHSCRHCDGRFPSKQARSKHIRRYHNNALEFTCNICKQKITTKVLFNLHQKEEHMGMRYECKFCNKLFKESSNWKQHELVHDPSFVRKKRVELPVIFPVEVQNRRVTRSSVVERVEVGKEVKQNTRKNKTTTEEVYKSEEILKFDKEMDEEVSNVHKKEPEQKKKATLVRKNVLTKRNIEEASVQTIKVERRKMKSNPSKNESKNEEKQTVDKRVENTETDEKPKQFICNNCNKTFPNRRNFHAHMRKYGEKKHACPTCGKRFNQMWNLKTHILVHTNEKNFECEFCERKFKTPQCLKVHLTVHSECKFKCQYCDNAYRTKEHYKHHYQTAHLGLLHNCKSCDRKFKDRRSFKLHEKSHEPGYVDVKAFKCSTCGISFRDMSKFNDHQRRRHADGSKRVCEVCGKSLSSGMSYTEHMRLAKQRKKGLKKKETDQSDVRKKERKENKTDEKSKEVVCNNCNKTFATKRVLLYHMRKYREKKHSCATCGRKFGQISNLKAHTLVHTNEKNFECETCLKQFKTPHSLKVHVNIHKEYKFKCEFCDKGFHTNQQFKHHHQTTHLGVVYTCKTCGKAFKDRANYKTHERTHDPDYVDIKAFKCHTCGLGFRNMRNFNYHQMRRHSDGSKRVCEVCGKSITVGIGYDEHMRLHTGEKPYSCSYCGKNFARRSGLRLHIVVHTKAKPHTCKLCDKSFTQRTALTIHERAIHTGERPYTCQVCSKGFVTSTLLKTHCKKAHGVASADILPKKEQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-