Dcer015632.1


Basic Information
Transcription Factor Domain
Sequence Information
Similar Transcription Factors

Basic Information

Insect
Dascillus cervinus
Gene Symbol
pol_2
Assembly
GCA_949768715.1
Location
OX458319.1:22930345-22943507[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 27 0.0032 0.21 13.2 1.8 4 23 993 1012 993 1012 0.96
2 27 1.5e-06 0.0001 23.6 1.0 1 23 1018 1040 1018 1040 0.98
3 27 6.3e-05 0.0042 18.6 3.2 1 23 1046 1068 1046 1068 0.99
4 27 2.2e-06 0.00014 23.2 0.6 1 23 1074 1096 1074 1096 0.99
5 27 5.2e-07 3.5e-05 25.1 1.6 1 23 1102 1124 1102 1124 0.99
6 27 8.9e-08 5.9e-06 27.5 1.2 1 23 1130 1152 1130 1152 0.99
7 27 2.3e-06 0.00015 23.1 1.0 1 23 1158 1180 1158 1180 0.99
8 27 0.00014 0.0095 17.4 1.5 1 23 1186 1208 1186 1208 0.99
9 27 0.00032 0.021 16.3 2.3 1 23 1214 1236 1214 1236 0.99
10 27 8.4e-06 0.00056 21.3 2.4 1 23 1242 1264 1242 1264 0.98
11 27 2.1e-06 0.00014 23.2 3.7 1 23 1270 1292 1270 1292 0.99
12 27 3.4e-05 0.0022 19.4 1.5 1 23 1298 1320 1298 1320 0.99
13 27 1.6e-07 1.1e-05 26.7 1.2 1 23 1326 1348 1326 1348 0.99
14 27 1.8e-07 1.2e-05 26.6 1.2 1 23 1354 1376 1354 1376 0.99
15 27 5.2e-07 3.5e-05 25.1 1.6 1 23 1382 1404 1382 1404 0.99
16 27 1.6e-07 1.1e-05 26.7 1.2 1 23 1410 1432 1410 1432 0.99
17 27 3.1e-07 2.1e-05 25.8 1.2 1 23 1438 1460 1438 1460 0.99
18 27 0.0004 0.026 16.1 1.4 1 23 1466 1488 1466 1488 0.98
19 27 0.00026 0.017 16.6 2.3 1 23 1494 1516 1494 1516 0.99
20 27 2.9e-05 0.0019 19.6 2.7 1 23 1522 1544 1522 1544 0.98
21 27 3.7e-06 0.00025 22.4 3.7 1 23 1550 1572 1550 1572 0.99
22 27 1.1e-05 0.00071 21.0 1.0 1 23 1578 1600 1578 1600 0.98
23 27 0.00016 0.011 17.3 1.7 1 23 1606 1627 1606 1627 0.98
24 27 1.8e-07 1.2e-05 26.6 1.2 1 23 1633 1655 1633 1655 0.99
25 27 0.00011 0.0073 17.8 0.8 1 23 1661 1683 1661 1683 0.98
26 27 2e-05 0.0013 20.1 1.5 1 23 1690 1712 1690 1712 0.98
27 27 3.4e-07 2.2e-05 25.7 1.4 1 23 1718 1740 1718 1740 0.99

Sequence Information

Coding Sequence
ATGAGTACGTATTCAGTAAATGCAGATCCACAATTGCTTAGTTATCTAATTAGAGTAGTAATAGGGAAATTAACGGGTAAAGCCCAGATATTAATAGGTAGTAGGAGTGAGCTAAATACATGGAAATTAGTTAAAGAGGCTCTTCAGTTGAGTTTTGGCGACCGAAGAAATTTAGATTGCCTAGAACAAGACTTAATCACTTTGCAACCTAACCGAAACGAGTCAGCCTTAGATTTTGatACAGGATGTTCTTCTAACATTCTCAGACCCGGTATTGCTGAACAGTATTTCCCAGATAGTATAATTCACGAACCCGCACAAATCAAAACAGCAATAGGTAAAACGGAGATCCGCTATAGAGCCAACATTCCAGCATTTAAAGAACTAAAGTCATCAGGAGAACTCGAATTCCTGTTGTATGACTTCCACGAGTACTTCGATGGAATTCTAGGAATTAAAGATCTTTcgcgtttaaatttaatcatagatttgaaaaacactaaattaacCAACAATAAAGTTCAAATACCCTTCTTTTATAGACAACCGTATGAGTCATCTCGTACGATTAGCATCAACAGCCATGAAGTTATACAAACTAAAATCCCTGTCGATCAAATAAAAGGAGATGTAATTATTCCAGAACAATACATTAATAAACTTTACATACCAGAAATTTTGACAGAAGTCAAAGATGGTATTGCTCTCGTAGAAATTCATAACAACACCAATTCTCGTATCACAGAAACTATTCAACAACCCTTTAAAGCTTATCCTTTCTCCGACCAACAAAAGCAACGCTTCACGTTTTATCATATCGATGACTTCTTACCAAATACACCTGTCAACAacaaaactacaaatttaGAACATCTAATCAGGACTGCTCACCTTAATAACGAAGAAAAAACAGCAATCATATCTCTGTGTCATGAATTTACTGACATCTTCCACAGagatgaaacaaaattaacattcACTAATCAAATTAAGCATCAAATCAAGACGACCGACGAAATTCCTGTCCATACTAGGTCATACAGATATCCGTTTATCCACAAACCAGaagtagaaaaacaaataaagaaaatgttggACGACGAAATAATCAGACCATCGCAGAGCCCATGGAGTTCACCCATTTGGATAGTTCCTAAAAAACTAGATGCCACCGGGAAACAGAAATGGCGCATTGTAGTAGATTACAGGAAGATCAACGAAAAAACAATAAGTGACAGATACCCATTACCCAACATCACGGACATCTTAGATAAATTAGGGAAATGCCATTACTTCACCACCCTCGATCTAGCTTCTGGATTTCACCAGATTGAAATGGGAAATGAATCGATTCAAAAAACTGCCTTCAACGTTGAAAACGGACATTACGAGTATACGAGAATGCCGTTTGGATTAAGAAATGCACCCGCAACATTCCAACGTGTGAtggacaatgttttaaaagaaTTGCAAGGAAAGATCTGTTTCGTTTACATGGACGACATAATAATTTTCTCCACATCACTCCAAGAACATCTGTCTAACCTAAAGTCGATATTCAAAACACTTCGCAAATCCAGATTCAAAGTACAACTCGACAAATCGGAATTCCTTCGAAAAGAAGTAGAATTTTTAGGTCATGTGGTAACATCTAATGGAATTAAACCTAACCCAAACAAAATCAAAGCTATTCAAAAGTTCCCCATACCAAAAACGGCCAAAGAGATCAAATCATTTCTAGGTCTCGTTGGATACTATCGACGTTTCATTAAGGACTTcgcaaaaattacaaaaccttTCACCCAATGCCTTAAAAAAGGTAACAAAATCCTACATACAGAAGAATTCTGCAAAGCGTTCGAATTCTGCAAAAATATCCTTAGCAATGACCCAATTTTACAATATCCAGATTTTACTAAACCTTTTAACTTAACAACGGACGCTTCTAATTTTGCTATCGGTGCAATATTAAGCCAAGGTAACATCGGAACTGATCTACCAATAGCATACGCTTCAAGAACACTAAATTCAGCAGAATGCAACTATAGTACGATTGAAAAGGAACTTCTAGCAATCGTATGGGCCACAAAGTACTTTCGCCCGTACCTTTTCGGAAGGAAATTCAAAATCATCACAGACCACAAACCTCTTCAATGGCTTTTCAACCTCAAGGAACCAAATTCACGACTTGTACGATGGAGACTGAAACTAGAAGAATTTGATTATGAAATTATATTCAAGAAaggaaaacaaaatactaaCGCCGACGCCCTTTCAAGAATCGAAATCAACGTCAccgaaaatgtggaaaattccTCAGTAATTGCTGACCCTGGAGATGCAGATCTTACAATCAATGAATTCTTGACTAACCTTGATCCTATTCCAGGAATAGATAGTTTAGCTGccttaaatgaatttgtagACAAATCATTTCCACCCGAtaaccaaaatttaaatttctcacCACCTAATAATGACAATAACATTCGAAccccaaaatttaaaattatctcaaaCACACAAATAAAACCTCCATTTAAAGAAACCTTTGACGACTTTTTAAGAACAATTAATTCTCGTATTACCTTTAGCACCAATATCATTGAACTCGACGATTCACTACTAACCGCCAACGATAATATCGCTCATTGTATATCCCAAGATCTCAAAATGAGTGCAGGACTAGCTAAGCAAATCAAAGAAAAACACGATCATACAGAATTACTTTACAATCAAAAACTCATCCTTCATGATATAGGAATCGCcccagaaaataataaaacagtctATTACcttGACGCGTGCAATGTTTTTGAACGACCGTCGAGACGTTCCAACTTCGTGTTGTATTCAACCAAGAGACGAGGAGGAAAAGCAGTAAGGCCTACAATCGCGTGGCTTGCGTCGCGTCgGTATCTTTCAGAAAATGTGCAAAATAATTCGATAACCGTCGTCGAGGAGAATTTTAAGTACAACCATTGTGATACAAGTTTTGACCTAAACAAGCAACTCACAAGACACATGCTCACTCATAAGGAAGAAAACCCATTTGAATGTATGGTCTGTAagaagaaattttcgaaatcaGCGGATCTGAATGCTCACATGAGAACTCATACGGGAGAGAGACCATTTGAATGTAAGGTCTGCATgaagaaattttgtacaagGGGGGAGCTGAATGTGCACATGAGGACTCATACCGGAGAGAGACCATTTGAATGTAATGTCTGTGcgaagaaattttcgaaatcaGGGGATCTCAATGTTCACATGAGAACTCATACGGGAGAGAGACCATTTGAATGTAATGTTTGTAGGAAGAAATTTTCGAGGACTGGGAACCTGAATGTGCACATGAGGACTCATACCGGAGAGAGACCATTTGAATGTAATATTTGTACGAAGAAATTTTCGACAAAAGGGGACCTGAATGTGCACATGAGGACTCATACCGGAGAAAGACCATTTGAATGTAATGTCTGTAcgaagaaattttcgaaatcaGGGGATCTGAATGTTCACTTGAGAACTCATACGGGAGAGAGACCATTTGAATGTAAGATCTGTATGAAGAAATTCTTGAGGTCAGATAACCTGAATGTGCACATGAGGACTCATACCGGAGAGAGAccatttaaatgtaatgtttgTACGAAAAAATTTTTGAGGTCAACCAGCCTGAATGTGCACATGAGTACTCATACCGGAGAGCGACCATTTGTATGTAATGTCTGCACgaagaaattttgtacaatggGGGAACTGAATGTGCACATGAGGACTCATACCGCAGAGAAACCATTTGAATGTAATATTTGTAGGAAGAAGTTTTCGAGGACTGGGCACCTGAATGAGCACATGAGGACTCATACCGGAGAGAGACCATTTGAATGTAATGTTTGTacgaaaaaattcttgaaGTCAGACAACCTGAATGTGCACATGAGGACCCATACCGGAGAGAGACCATTTGAATGTAATGTTTGTACGAAGAAATTTTCGACAAAAGGGGATCTGAATGTGCACATGAGGACTCATACCGGAGAAAGACCATTTGAATGCAATGTTTGTACGAAGAAATTTTCGACAAAAGGGGAGCTGAATGTGCACATGAGGACTCATACCGGAGAGAGACCATTTGAATGTAATGTttgtaggaaaaaattttcgaGGACTGGCAATCTGAATGTGCACATGAGGACTCATACCGGAGAGAGGCCATTTGAATGTAATGTTTGTACGAAGAAATTTTCGACAAAAGGGGACTTGAATGTGCACATGAGGACTCATACTGGAGAGAGACCATTTGAATGTAATGACTGTAcgaagaaattttcgaaatcaGGGGATCTGAATGTTCACATGAGAACTCATACGGGAGAGAGACCATTTGAATGTAAGGTGTGTATGAAGAAATTCTTGAGGTCAGAGAACCTGAATGTGCACATGAGGACTCATACCGGAGAGAGACCATTTAAATGTAGTATTTGTACGAAAAAATTCTTGAGGTCAACCAGCCTGAATGTGCATATGAGTACTCATACCGGAGAGCGACCATTTGTATGTAATGCCTGCACgaagaaattttgtacaaaggGGGAACTGAATGTGCACATGAGGAGTCATCCTGGAGAGAAACCATTTGAATGTAATGTTTGTAGGAAGAAATTTTCGAGGACTGGGCACCTGAATGAGCACATGAGGACTCATACCGGAGAGAGACCATTTGATTGTAATGTTTGTAcgaataaattttcaacaaaaggGGATCTGAATGTGCACATGAGGACTCATTCCGGAGAAAGACCATTTGAATGTAATGTTTGTACGAAAAAATTTTCGACAAAAGAGCTGAATGTGCACATGAGGACTCATACCGGAAAGACATCATTTGAATGTAATGTTTGTACGAAAAAATTTTCGACAAAAGGGGAGCTGAATGTGCACATGAGGACTCATACCGGAAAGACATCATTTGAATGTAATGTTTGTACGAAAAAATTTTTGAGGACAGGGAACCTGAATGTGCACATGCGGATTCATACCGGAGAAAGACCATCATTTGAATGTAATGTTTGTACGAAAAAGTTCTTGAGGTCAGACAACTTGAATGTGCACATGAAGACTCATACCGGAGAGACACCTTTTGAATGTAACCTCTGTACGAAGAAATTTTCGACAAAGGGGGAGCTGAATGTGCACATGAGGACTCATACCGGAGACATCATTTGA
Protein Sequence
MSTYSVNADPQLLSYLIRVVIGKLTGKAQILIGSRSELNTWKLVKEALQLSFGDRRNLDCLEQDLITLQPNRNESALDFDTGCSSNILRPGIAEQYFPDSIIHEPAQIKTAIGKTEIRYRANIPAFKELKSSGELEFLLYDFHEYFDGILGIKDLSRLNLIIDLKNTKLTNNKVQIPFFYRQPYESSRTISINSHEVIQTKIPVDQIKGDVIIPEQYINKLYIPEILTEVKDGIALVEIHNNTNSRITETIQQPFKAYPFSDQQKQRFTFYHIDDFLPNTPVNNKTTNLEHLIRTAHLNNEEKTAIISLCHEFTDIFHRDETKLTFTNQIKHQIKTTDEIPVHTRSYRYPFIHKPEVEKQIKKMLDDEIIRPSQSPWSSPIWIVPKKLDATGKQKWRIVVDYRKINEKTISDRYPLPNITDILDKLGKCHYFTTLDLASGFHQIEMGNESIQKTAFNVENGHYEYTRMPFGLRNAPATFQRVMDNVLKELQGKICFVYMDDIIIFSTSLQEHLSNLKSIFKTLRKSRFKVQLDKSEFLRKEVEFLGHVVTSNGIKPNPNKIKAIQKFPIPKTAKEIKSFLGLVGYYRRFIKDFAKITKPFTQCLKKGNKILHTEEFCKAFEFCKNILSNDPILQYPDFTKPFNLTTDASNFAIGAILSQGNIGTDLPIAYASRTLNSAECNYSTIEKELLAIVWATKYFRPYLFGRKFKIITDHKPLQWLFNLKEPNSRLVRWRLKLEEFDYEIIFKKGKQNTNADALSRIEINVTENVENSSVIADPGDADLTINEFLTNLDPIPGIDSLAALNEFVDKSFPPDNQNLNFSPPNNDNNIRTPKFKIISNTQIKPPFKETFDDFLRTINSRITFSTNIIELDDSLLTANDNIAHCISQDLKMSAGLAKQIKEKHDHTELLYNQKLILHDIGIAPENNKTVYYLDACNVFERPSRRSNFVLYSTKRRGGKAVRPTIAWLASRRYLSENVQNNSITVVEENFKYNHCDTSFDLNKQLTRHMLTHKEENPFECMVCKKKFSKSADLNAHMRTHTGERPFECKVCMKKFCTRGELNVHMRTHTGERPFECNVCAKKFSKSGDLNVHMRTHTGERPFECNVCRKKFSRTGNLNVHMRTHTGERPFECNICTKKFSTKGDLNVHMRTHTGERPFECNVCTKKFSKSGDLNVHLRTHTGERPFECKICMKKFLRSDNLNVHMRTHTGERPFKCNVCTKKFLRSTSLNVHMSTHTGERPFVCNVCTKKFCTMGELNVHMRTHTAEKPFECNICRKKFSRTGHLNEHMRTHTGERPFECNVCTKKFLKSDNLNVHMRTHTGERPFECNVCTKKFSTKGDLNVHMRTHTGERPFECNVCTKKFSTKGELNVHMRTHTGERPFECNVCRKKFSRTGNLNVHMRTHTGERPFECNVCTKKFSTKGDLNVHMRTHTGERPFECNDCTKKFSKSGDLNVHMRTHTGERPFECKVCMKKFLRSENLNVHMRTHTGERPFKCSICTKKFLRSTSLNVHMSTHTGERPFVCNACTKKFCTKGELNVHMRSHPGEKPFECNVCRKKFSRTGHLNEHMRTHTGERPFDCNVCTNKFSTKGDLNVHMRTHSGERPFECNVCTKKFSTKELNVHMRTHTGKTSFECNVCTKKFSTKGELNVHMRTHTGKTSFECNVCTKKFLRTGNLNVHMRIHTGERPSFECNVCTKKFLRSDNLNVHMKTHTGETPFECNLCTKKFSTKGELNVHMRTHTGDII

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-