Basic Information

Insect: Dascillus cervinus
Gene Symbol: ham
Assembly: GCA_949768715.1
Location: OX458323.1:31030894-31032297[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 6.1e-06 0.035 15.2 0.1 18 41 248 268 242 270 0.89

2 3 3.5e-06 0.02 16.0 2.2 17 44 275 299 268 299 0.88

3 3 0.063 3.6e+02 2.4 1.4 14 41 301 325 297 327 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	6.1e-06	0.035	15.2	0.1	18	41	248	268	242	270	0.89
2	3	3.5e-06	0.02	16.0	2.2	17	44	275	299	268	299	0.88
3	3	0.063	3.6e+02	2.4	1.4	14	41	301	325	297	327	0.82

Sequence Information

Coding Sequence: ATGAGTGTGGCGGACACGGATTATCCGTGGCTTCGGTGCTTACCTCCGCTGCCTTTGAATCGACCCCTCACCATGCGCGAAAAAGACTCTTCCCCGAGGAAAATGCTGGTGGCTTCCGGAGGACACAGTTCACCGAAACAAGCGGCGGTCTATCCGCTCTCTGTGAGAGTGCCGCCAGGAGATGACGTCCCCTTCGACCTGTCACGTAACACGCGATCGCCGGGACCCCATATGTCACCGGCGGGACGACCACCTCCAGGTCCCCAGGACGCAGACGATCAACCGTTAGATTTAAGAGTCGACCACAAGAAATCGCTCATGTTTATGCGACGACAAGTTGAAGACGAGAACAGAAATTTAGTTTCGCCGACTGGTAGCATTACCAGCGACAAAGACGAAATCACTGTTGATGAGAGGGCGAGCTCCATCCACATGAATCGTAACATGAAGCAATTCGCTCCTCAGATACCGGGTTACCCGGTGCTGTTTCCGCCTCAACCGATCCATCCGATGATGCTAGAAGCAATGTACCGCGTGCAAGGCGGCGATAAGATTCCTCGTTTACCTCTTCCTTACTCTAGTTCATCGGCCGGCTATCCTCAACGGTATCCGTTTCTAAGTCCAGCTATGTTAAGTCCTCCCGTTAGTCAAGTTCCTTACGATATGTTACGAAATCCTCCCACGCCGCAAGCTCCGAAAGTATTCGCGGACGCGGCCGGTGCTAAGATGAAAGACCGATACGCTTGTAAATTCTGCGGCAAAGTGTTTCCGCGCTCGGCGAATTTAACGCGACATTTGCGCACACATACCGGGGAGCAGCCGTACAAGTGTCGGTACTGTGAACGGTCCTTCAGCATTTCGAGCAATCTGCAACGACATGTGCGCAACATCCACAACAAAGAGAAGCCGTTTAAATGTCCGCTCTGCGAGCGATGTTTCGGTCAACAGACTAATCTTGATCGACATCTCAAAAAACACGAGGCTGACGGCCCTACAATCTTAGATGAAAGAAATTTTCAAAGACGAACTGTGACTAGCAGAAATACAGGCGAAGAATCATACTTCGAAGAAATACGGTCTTTCATGGGAAAAGTGACCGACGGACGTTTGCTCCAGCACTTTCAGAACCCTCGACCAGTTCCTAATTTTTCACTGACTCTGCCGCAAAAGCTCTACGATTCCGCGAAGCTGCTGTCGCCAAAGGACAAAGCGCGCACCCCCACCTCTCCAGACGATTCCAAGAGAGATTCCTCTTACTTCTCGGACAAGGATAACTATTCGTCGAGTTCCTCGACCAGCTCCGAATCGTCCTTGACGCCCAAAGGCGACGACAAGCACGACAAATCGTCCGTCAACAGCGAGGATAAGATGGACGAGGCTCAAGACACCCACAGCAACACTTGA
Protein Sequence: MSVADTDYPWLRCLPPLPLNRPLTMREKDSSPRKMLVASGGHSSPKQAAVYPLSVRVPPGDDVPFDLSRNTRSPGPHMSPAGRPPPGPQDADDQPLDLRVDHKKSLMFMRRQVEDENRNLVSPTGSITSDKDEITVDERASSIHMNRNMKQFAPQIPGYPVLFPPQPIHPMMLEAMYRVQGGDKIPRLPLPYSSSSAGYPQRYPFLSPAMLSPPVSQVPYDMLRNPPTPQAPKVFADAAGAKMKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCRYCERSFSISSNLQRHVRNIHNKEKPFKCPLCERCFGQQTNLDRHLKKHEADGPTILDERNFQRRTVTSRNTGEESYFEEIRSFMGKVTDGRLLQHFQNPRPVPNFSLTLPQKLYDSAKLLSPKDKARTPTSPDDSKRDSSYFSDKDNYSSSSSTSSESSLTPKGDDKHDKSSVNSEDKMDEAQDTHSNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00423225;
90% Identity: iTF_00423225;
80% Identity: iTF_00423225;