Basic Information

Gene Symbol
CDC5L
Assembly
GCA_949768715.1
Location
OX458316.1:4270098-4272685[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-16 2.5e-13 51.0 1.5 2 46 9 54 8 54 0.97
2 2 4.8e-12 9.1e-09 36.4 0.1 1 45 60 103 60 104 0.93

Sequence Information

Coding Sequence
ATGCCGCGAGTTATGATAAAAGGAGGTGTTTGGAGGAACACCGAGGATGAAATCCTCAAAGCTGCCGTTATGAAATATGGCAAAAATCAATGGTCCCGTATTGCCTCGTTGCTGCACCGTAAATCAGCCAAGCAATGTAAAGCGCGTTGGTTCGAATGGTTAGATCCGAGCATTAAAAAAACCGAGTGGTCGCGCgaagaagatgaaaaattGCTACATTTAGCGAAATTAATGCCCACACAGTGGCGAACAATCGCCCCAATAATTGGAAGAACAGCGGCCCAATGTTTAGAAAGATACGAATACTTACTCGATCAAGCGCAGAAAAAGGAAGAAGGGGAAGATGCCGCTGACGATCCACGTAAATTAAAACCGGGAGAAATCGACCCCAATCCTGAGACTAAGCCGGCACGGCCCGATCCGAAAGACATGGACGAAGACGAGTTGGAAATGTTGTCGGAAGCGAGGGCTCGTTTGGCCAACACTCAAGGCAAGAAGGCAAAGAGGAAAGCTCGCGAGAAGCAGCTTGAGGAAGCTCGCAGGCTGGCAGCATTGCAAAAACGTCGCGAATTAAGAGCTGCCGGTATTGAGGTGACTTCACGGCGTAAGAGAAAACGTGGAGTTGATTACAACGCGGAAGTTCCGTTCGAAAAAAGACCACAGTCGGGATTCTACGACACATCGAAGGAAGTGATGGATCCGATGGCGCCTGATTTTTCTAAGATGAGACAGCAGCATTTAGATGGGGAGTTACGGCTTGAAAAGGAAgagCGAGAAAGGAGGAAGGATAAGCAGAAACTGAAGCAACGCAAAGAAAACGATATTCCACTGGCAATGTTGCAAAACCAAGAGCCAGCGAAAAAACGTTCCAAATTGGTTTTGCCCGAGCCCCAAATATCCGATCAAGAACTGCAGCAAGTGGTCAAATTAGGCCGTGCCAGCGAAATGGCACGAGAAGTTGCATTAGAAAGTGGTGTAGAAACAACAGATGGTTTGCTGAATGATTATTCAATGACCCCGCAAGTTGGTGCCACCCCACGCACACCCGCTCCACAAACTGACCGCATTTTACAAGAAGCACAAAATATGATGGCACTTACACACGTAGACACGCCGTTAAAGGGCGGTGCAAACACCCCACTCCACAATTCGGACTTCATGGGCACTTTACCACAATCACAAGCTTTAGCTACGCCAAACACAGTTCTAGCCACCCCTTTTAAATCGACTAGAAGCGATGGTGGAACCACACCGAGCAATTTTGTTACGCCTAAAAGGGCTGGACAAGTCGGACCTGCCACCCCGACTCCAGTCAGAGATAAACTGAACATCAATGTTGAAGAAGGAAGTGTATCTGTAACCTCAGTGAGTCAGAAATCGACTAAAGATTACCTACGAGTTGGGTTAAGTAGTTTACCAACCCCTAAAAACGATTATGAAATTGTTGTGCCCGATAAAGAGGAACCTCCAGCTCCTGCAGAACAAGAACAGATGGTCAGCGATCAAGCTGATGTAGACGCTAAAGCCATGGCAGAACAGAAAGCCAAACTAGCCAGAGAGCATGCATTGCGCTCACAAGTCATTCAGCGCGAGCTACCCAGGCCCCACTCGGCAAATATGTCAATGTTGAGACCGGTGGATCCATCATTAAGTGACTTACAAAAAGCCGAAGAATTTATTAAACGAGAGATGATTACAATGCTCAATTACGATAACGTCAGAAATGTAAATACCGTAAATCACCAACACATAAAGCGACATTCTGACACTCCTCATGTGAATCCATTGACTTATTTGGAAGTACATCCTTACGACAATTTTTCCGGTGAGGAATTGGCAGTCTCCAGAAGTATGCTGTTCAAGGAGATGGAAGTTGTTAAACGTGGCATGAATCATGGGGAGCTTTCGATAGATGCATACACCCAAGTTTGGGAGGAGTGTTTAGctcaagttttatttttacccAATCAGAATCGGTACACTCGAGCCAACTTGGCAAGTAAGAAGGATCGTTTGGAATCGTACGAGAAACGATTGGAACTGAATAGAATGCATATGGCGAGAGAAGCTAAACGAGCAagtaaaatggaaaaaaagctGAAAATCCTCACCGGAGGTTATCAGTCTAGAGCCCAGGCGCTGATTAAGCAGCTGCAAGATTTCTACGATCAAACCGATCAAGCGAATCTTGAATTgagtacttttaaatttttacaagagCAGGAGAAAGCTGCATTACCAAAACGAATTCAGGTAtgcaaacttaaaattaaattaatttga
Protein Sequence
MPRVMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGEDAADDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEVTSRRKRKRGVDYNAEVPFEKRPQSGFYDTSKEVMDPMAPDFSKMRQQHLDGELRLEKEERERRKDKQKLKQRKENDIPLAMLQNQEPAKKRSKLVLPEPQISDQELQQVVKLGRASEMAREVALESGVETTDGLLNDYSMTPQVGATPRTPAPQTDRILQEAQNMMALTHVDTPLKGGANTPLHNSDFMGTLPQSQALATPNTVLATPFKSTRSDGGTTPSNFVTPKRAGQVGPATPTPVRDKLNINVEEGSVSVTSVSQKSTKDYLRVGLSSLPTPKNDYEIVVPDKEEPPAPAEQEQMVSDQADVDAKAMAEQKAKLAREHALRSQVIQRELPRPHSANMSMLRPVDPSLSDLQKAEEFIKREMITMLNYDNVRNVNTVNHQHIKRHSDTPHVNPLTYLEVHPYDNFSGEELAVSRSMLFKEMEVVKRGMNHGELSIDAYTQVWEECLAQVLFLPNQNRYTRANLASKKDRLESYEKRLELNRMHMAREAKRASKMEKKLKILTGGYQSRAQALIKQLQDFYDQTDQANLELSTFKFLQEQEKAALPKRIQVCKLKIKLI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-