Dcer018006.1
Basic Information
- Insect
- Dascillus cervinus
- Gene Symbol
- -
- Assembly
- GCA_949768715.1
- Location
- OX458320.1:10175820-10178017[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.6e-09 8.1e-07 29.8 0.0 2 39 16 53 15 57 0.92
Sequence Information
- Coding Sequence
- ATGCCACGTACACATGTTTGCAAAACCAATCGGCGAGATATAGACGAGAATAATATGAAGGAAGCGATTATTAAttgtctaagaaaaattctgaGTGTTCATGAAGCTGCAAGGCGGTATGGAGTGAAAAGGTCGACGTTGCAGTCCAGAATAAAAACCCTgctaaagaaaagaaaagtagAGGAAGTCTTAGCTACCATTGACAGAGATTTTGGAAATAAAGGCAGCGATGAAGAGAATAAATACCGTAGTAAATACACTGTTAAACAAGTTTTCACAACATCTCAGGAAAGGGAGCTCGTTAAATATATTGAGAAATCATCCAATCTGAATTACGGGTTGTCATATAAACAAGTACGAAAATTGGCTTACGAGTTTTCACAAATGTTACCAGTTTGTGTGACACCAATCAATTGGAAAAGAAGTGAGTTGGCAgGAATTGAATGGCTTAAAGGTTTCATGTCTAGAAACAAACAGTTGTCTTTAAGAAAACCTGAGAATACCAGCCTGAACAGGGCCATGTCATTTAATAAAGACAGATTGGgggaatttttttccaattatgTCACAATCTTAGAAAGACACAAATTCAAACCAGagcaaatatataatttggaCGAGACTGGCATACAAACTGTGATGAAACCAGTAAAAGTTGTCTCCACACGTGGAAAAAAACAGGTTGGACAGGTAGCTTCGGCCGAACGAGGAGAATTGGTTACCTTTGTTGGTATAATCAGCGCCACTGGAGGAACCATTCCACCTGTTTTTGTTTATCCTCGCATAAGAAATGTGAGAGACTTTTTGGATTGTGCTCCCATTTCCAGTATTGCATTGGGAAACAAATCAGGTTGGATGACGTCGGAGCTGTTTATATTTGTTCTCCAACACATTGTTCAGCACACAAATTGTTCCGTTGAGaagaaaatattactattGATCGACAACCATGAATCACACACATCATTTGGAGCAATTCAGTATTGTAGAAGTAATGGTATAGTACTTTTATCTGTTCCTCCACATACCACACATCGTCTTCAACCACTGGACATTGCAGTGTACGGGCCTTTCAAAGCGTACCTAAATATTGCTTTCAATGATTATATGCTCACACACCCTGGGAAGATGATAACCATCAAGCAAATTGCCCAGCTGGCCAGTAAAGCTTTTGATTGCTCGTTCACCAAAAGAAATATCATAAGTGGTTTTGAAAAACCAGGCATTTGGCCTCTTGCATTTAACGACGAAGATTTCATGCCGAGCACAGTCACTGACATTTCCAATGTTGAAAACAGCAGTCTGTTTGCTGAAGTAGAACCTGCTGCCATTCCTTCAACTGCCAAGCAAAACAATTGCAGTAGAGAAGAAAGAGAACAAACCACTTCTACTTCAACTGTTAGATATGATGATGTGGAAGGAATAGAACCTAAGCCAGCCCCTTCAACTTCAAAAGAGAAAGAATCAGTTGTAACTCCGGTTTCTCAAAGGGACAAGCGTGAAATTAAAGTTCCAAAGTCACTGGAAGAATTGAGGCCGTATCCTAAGGGAGATGGAAAAAAGAAGAGAAAGAGAAAAATTCCATCAAAATCTTACGTATACACAAATACCCCGGAAATGCTAATGAAACAAAgcattgaaatgaaaaaaaagacGAAAGAAGAGAACATAGACGATTTAGAATATGAAATCAAGTTCttgcgacgaaaaaataaatcaaacacATTTATACATCCTCAAGTAGAAGATATCAGCAGTGTAAATAAAAGTGATGTCATCGCATTGTTGCTGCAAGGAAGTAAACTGTCAACAGCCAGGACATCGTCCTTGTAcacttttaattacaattttgaagGACTTAATGTTCGTTAG
- Protein Sequence
- MPRTHVCKTNRRDIDENNMKEAIINCLRKILSVHEAARRYGVKRSTLQSRIKTLLKKRKVEEVLATIDRDFGNKGSDEENKYRSKYTVKQVFTTSQERELVKYIEKSSNLNYGLSYKQVRKLAYEFSQMLPVCVTPINWKRSELAGIEWLKGFMSRNKQLSLRKPENTSLNRAMSFNKDRLGEFFSNYVTILERHKFKPEQIYNLDETGIQTVMKPVKVVSTRGKKQVGQVASAERGELVTFVGIISATGGTIPPVFVYPRIRNVRDFLDCAPISSIALGNKSGWMTSELFIFVLQHIVQHTNCSVEKKILLLIDNHESHTSFGAIQYCRSNGIVLLSVPPHTTHRLQPLDIAVYGPFKAYLNIAFNDYMLTHPGKMITIKQIAQLASKAFDCSFTKRNIISGFEKPGIWPLAFNDEDFMPSTVTDISNVENSSLFAEVEPAAIPSTAKQNNCSREEREQTTSTSTVRYDDVEGIEPKPAPSTSKEKESVVTPVSQRDKREIKVPKSLEELRPYPKGDGKKKRKRKIPSKSYVYTNTPEMLMKQSIEMKKKTKEENIDDLEYEIKFLRRKNKSNTFIHPQVEDISSVNKSDVIALLLQGSKLSTARTSSLYTFNYNFEGLNVR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00422222; iTF_00422224; iTF_00422241; iTF_00422242; iTF_00422246; iTF_00422226; iTF_00422227; iTF_00422228; iTF_00422238; iTF_00422239; iTF_00422240;
- 90% Identity
- -
- 80% Identity
- -