Dcer023399.1
Basic Information
- Insect
- Dascillus cervinus
- Gene Symbol
- -
- Assembly
- GCA_949768715.1
- Location
- OX458321.1:11270023-11271850[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.6e-10 1.4e-07 32.3 0.1 4 39 18 53 15 56 0.88
Sequence Information
- Coding Sequence
- ATGCCGAGAATAAGGAAACGAACAACTGTAAAGGCCTCCTGGGATGCAGCAGCGCTTGAAAATGCTGTTAGCTCTGTACAGAAGGAAGGGAATTCTATTCATAAAGCCGCCAGAGCTAATGGAATTCCGTACAGCTCGCTGCAAAAAAGGCTGAAGAAAGGGTTATTAAATATAGGTCCAAAACTTGGAAGAAATACTGTATTTTCCAAAAAACAGGAAGAAACTTTAGCAGAACACGTGATTAAACTAAGCAATATGTTTTACGGATTAAACACATTGCAACTAAAACGTATAGCTTTTCAGTGCTCAGAGCAATATGGAATTGATCATCCGTTTTGCAAAATAAAGAAGTTAGCAGGACGTGATTGGTTGGAGGGATTTCTTAGACGCAATCCTACTATTAGTGTTAGAAAACCGGAAGCTACTAGTATAAATAGGATTAAAGGTTTTAATAAACAAGAAGTTGGACGATTTTTCACCAATCTGGAAATTCTTCTTCACAAATACAAGTTTAGATCTTCCCAAATCTTTAATATGGATGAAACTGGAATATCTACTGTCCAAGATCCAGGACGCATATTAGCTCCAAAGGGCCAGAAAAGAGTTGGCACCATTACAAGCTGGGAAAGAGGTAAAAACATAACGGTAATATGTGCCATGAATGCAACAGGCATTTTTGTGCCACCTTTATTCATATTCCCGAGAAAACGCCATTCTGTTCTTCTTGAGAAAGATGGTCCAGCAGATTCAAGATATTATTGCACTCTTAATGGATGGAGTAAtgagaacatttttttgtcttGGCTTGAACATTTTAAGACATTTGTAAATCCGATGCCAGGGTCTCCAGTTCTTTTGGTATTGGACAACCATAACAGCCATGCTACGTTAGAAGCATATGAATAttgcaaaactaataatattgttatgcTATCGCTCCCTCCACATTCTTCCCATCGGATGCAGCCTCTGGATCTAACATTTTATGGTCCTTTAAAAAAGGCATACTATCAAGAGTGCGATTTATTCATGAAATCAAAGCATTTGGTTCAAATAACACCTTACGATATTGCTGGTCTTTTTAACAAGGCTTATTGTAGAGTAgctaatttagaaaaatgtgtatCTGGATTTCGTTCTGCTGGAATTGTTCCGATGAACCCTAATATATTTACTGATTTAGACTTTCTTGTTCATAACGAGGCTGTTGTTATTGAACAAGAACAACCCAATCTCAACGTAGATGATGATGATGTTGACTCTCCAACGGCTTCCTTCCAGTCTTTGCTAGAAAATATTTCTCCaagaagaagaagcgTCTGTTCaacgataaaaaaaaaagaacagaCAAGAAAAAAGAAAGTGGTCAAAGATTTTAAGGCACTAAGCAAATCTGACACCAAATCTGCACATAAGAAGGAAACACAAAGAGTGCAATATGAGGAAACTTCATCAAAAGATAGCACTGATGATGAATaccaaagaaaaaagaaatacaatACCAATGGAGTAAAAAAAAGGGTGTTTGTAGATTCCGATTCAGATGAAAATACGACTGCCGCAAAGTCAGACCTGTGTTTAATATGCAACGACAATGGAAAAGATGGTGAAATGTGGTATCGTTGCACTAGATGTGGCAAGTGGGTGCATTCAGAGTGCAGTGGTACAGAAAgcccaaaaaattatatttgtgaattttgtcttaattttaattaa
- Protein Sequence
- MPRIRKRTTVKASWDAAALENAVSSVQKEGNSIHKAARANGIPYSSLQKRLKKGLLNIGPKLGRNTVFSKKQEETLAEHVIKLSNMFYGLNTLQLKRIAFQCSEQYGIDHPFCKIKKLAGRDWLEGFLRRNPTISVRKPEATSINRIKGFNKQEVGRFFTNLEILLHKYKFRSSQIFNMDETGISTVQDPGRILAPKGQKRVGTITSWERGKNITVICAMNATGIFVPPLFIFPRKRHSVLLEKDGPADSRYYCTLNGWSNENIFLSWLEHFKTFVNPMPGSPVLLVLDNHNSHATLEAYEYCKTNNIVMLSLPPHSSHRMQPLDLTFYGPLKKAYYQECDLFMKSKHLVQITPYDIAGLFNKAYCRVANLEKCVSGFRSAGIVPMNPNIFTDLDFLVHNEAVVIEQEQPNLNVDDDDVDSPTASFQSLLENISPRRRSVCSTIKKKEQTRKKKVVKDFKALSKSDTKSAHKKETQRVQYEETSSKDSTDDEYQRKKKYNTNGVKKRVFVDSDSDENTTAAKSDLCLICNDNGKDGEMWYRCTRCGKWVHSECSGTESPKNYICEFCLNFN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00422220;
- 90% Identity
- iTF_00422220;
- 80% Identity
- -