Dcer029169.1
Basic Information
- Insect
- Dascillus cervinus
- Gene Symbol
- CHR28
- Assembly
- GCA_949768715.1
- Location
- OX458323.1:429600-438911[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-09 6.4e-07 30.1 0.1 4 38 18 52 17 57 0.92 2 2 3.7e-09 6.5e-07 30.1 0.0 2 38 693 730 692 734 0.90
Sequence Information
- Coding Sequence
- ATGGTGAGAacatataaaagaaaaactacTCGAGGGGAGACACCAATTGCAGCATTTCAGCAAGCTGTTAATGCCATTTCCCAAGAGAAAATTTCTTTAAGAGCTGCTGCTGATAAATTCGGAATTAACTTTATGACCCTTTATCGTTACATAAAAAAGTTACGGTTGGAACCAGTAAATCCTCCATCTGTTGGATATGCCAAAccatctaaaatttttactctAGAACAAGAGGAGGAGTTGGCTAAATATGTAGAAGATTgctcaaaaatatattatggaCTAACTACAAGAGATTTGCGGAAGTTAGCTTATAATTTAGCTGTTGccaacaaaaatgaaatacacgaaaattggaaaaatgatGAAATGGCATCAAAAGATTGGTTATTGGCTTTCATGAAACGACACCAAAATTTATCTATTCGCATCCCAGAGTCTACAAGTCTTTCAAGAGCTACAGCATTTAACCGCGATaatgttaatttgtttttcgacaATCTTGGTGCCGTTTatgataaatataaatttcagCCGAATGATGTATATAATGTTGATGAGACCGGACTTACAACGGTACAAAAACCATGTAAAATTATTGCAAGAAAAGGAGCAAAACAAGTTGGTGCTATTACTTCAGGAGAAAGAGGTACATTAGTAACCATGGCTTTGGCAGTTAACGCAGTTGGTAACAGTGCGCCACCAATGTTAATATTTCCTCGAAAGAAATTCAAGGCATTCATGACAGCCAATGCAACTATTGGTTGTATTGGAGCAGCCTATCCCTCTGGATGGATGACAagagaaaattttttattatttattcaacatttcatcaaatttacacggTGCACTAAAGACAAACCTGTTTTACTTATCCTAGACAATCATGAATCACATCTGTCGATTCCAGCGCTTAATTGTTGTAAAGATAATGGTGTGGTACTTTTAAGTTTTCCTCCTCACACCTCCCATCGTCTGCAACCCTTAGACAGAACAGTGTACGGTCCActcaagaaattttttaatcatcAGGCTGATGGATGGCTAAAATCGCATCCTGGCGTTCCTATGAGCATTTATGACATTCCAACAGTATTGAGGGAAGCTCTGCCACTTGCTGCTACGCCGTTTAACATTCAGAATGGATTCTTATGCACCGGAATTTGGCCGTTTAACAGAGAGATTTTTACAGATGATGATTTTTTGCCGTCGGAAGTTACAAATAGGGAATACAATGGTGACACAAATAAGTCAAATATGATTAATCAACCAAATCAGGTCTCTGAGCAACCTGATCGTACATTAACAATTCGGCATTCAACACCATCTCCTCAACCATCAACTTCTATTGCTGGATGTTCCACAGATGTGTCGACTCGTATTACGCCACAACAGTTAAACCCTTTCCCGAAGGCCCCTCCTCGGAAACAATCAGTTAACCGCCGGAAACGTAAATCTGCAATTTTAACGAACACTCCTGTAAAGGATGCATTGGAAAAAGAAGCCCACGAAAGGGAAAATCGAAGGAGCAAAATAAAAGGCAACGGCCCTGTTAAAAGAAATCTAAGTGGAAATAACAGCAAAGCCaaaaagaaaatgattaaaaaaaacaatgaaacATATTCTGAAGAGTCCGATGAGTCCGAAGATAATGAAATTTGCCTTATCTGTTTGATACCGTTCTCACAAaTGTCAGAAGATCCAGAGGGTCTAATAAGTCCCTTAATGCAACATCAGAAGCAAGCGCTAACTTGGTTAAGATGGCGCGAATCGCAGGAACCATCTGGTGGGATTCTAGcgGATGACGCGGGATTGGGAAAAACATTAACGATGGTATCACTAATGTTAACATCCAAACTTAATGAAGATGATAATTTGTACAGAAGAAAAAGAGATGGTGGAACCTTAGTGGTATGCCCTGCCAATCAACTCGAAAAGTGGGAAAAGAAATTGGATACAAATGTCGAACCTAACTTCATATTAGCGATGACTTATCACGGACGTAACCGAAAGGACCAcatcaaaatattCAATATGGGTAAACCTAAACCAAAATGTGACAATACCTTTAAACgcgaaatattgaaaaaagccATCGATAAGGTGATGTCAAAAGAGTTATCTCTGAGAAAGTCATCTGAAGTCTACAATGTGCCGAAAAGTACCCTGTTTgactacattaaaaaattgaaacgagGAGAAGAAGTGAACTTATCACTCAAAAAAGGCAGATTTGACCCAACATTTATCGTGGAGTACGAAGAAGCTCTAATTGCGCACGTGGTGGATATGTCCAATAGGTGCATGCCTTTGACTAGAAaagaatttatgaaattgGCTTTCGATCTCGCGGAGAAATTAAAACTGAACCACAGATTCAACAGGGCCAAGAAAAGTGCTGGTAAACATTTTTACTATGATTTTGTCAAACGCCATCCTGAACTCAGCTTGAGAAGGCCAGAGTCAACAAGTCTGATGCGAGCTGTTGGCTTTAATAGGCCACAAGTTGACCGTttctttaacaatttaaaggcaatttatgaaaaatatcattttggCCCATCGGACATCTATAACTGCGACGAGACAGGGGTCAGCACTGTCCAGAAGCAAGCTAAAGTACTGACACACAAAAGTAATCTCCAAGTTGGCAAGTTAACTTCTGCAGAGAGAGGtaaaaatgtcacagttaTGTTCTGTATGAGTGCTGCCGGATATTTTATCCCACCACTATTTATATTCCCTAGACAGAGAGTTAATGAAAGGTTGATGATTGGTGCTCCATCTGAAAGTATTGCCGTGGCACAGCCAAAGGGATGGATGAACGCTGAATTATTCTTAAAATGGCTTCAACACTTTGTAAAGTTTTCAAAGCCTTCTAAAGAGAAGCCCGTGCTTTTGGTCCTAGATGGTCATTGCAGTCATAAAGATCTTGCTGTTATATGTTATGCAAAAGATAACCACGTGCAAATGTTAAGCACTCCACCGCACACAACCCACAAACTGCAGCCCTTAGACAGGGTTTTTATGAAACCATTCAAGGATGCATATTTTGAGGCCTGTGGGTTATGGATGAGGGCCAACGCCGGTGCAAGAATAACAGAATATGAAATAGCTGCAATGGTGACACAAGCTTTCACTCGCGTTGCACGTTTGGACATAGCGAAATCTGGATTTCAATGCACTGGAATTCTGCCTTTGAATTCAAATGTTTATACAGATTTAGATTTTCTGCCATCAGCTGTAACCGACATGCCCATGCAGTCTATTAATGAAGGAAATGTTTGCAATGACGCAGATATGGATACACTCCAGGATCTACCTCCAGAGACTTTTGACATCAATGAAAAGGAGAATGTCAAGACACAACCGTCGACAAGCAAAGCCATTGTCACAGTAATCCATCAGCTATCACCAGTCCCAAACGCTGCAGCAAAGCGAACCGTGTGTCGACGACGAAAAGCTGAGAAGAGTGAGATCTTAACATCCTCCCCCTACAAAAATGCGCTCGTTGAAAATAAAGCAACAAAGGTTAAGCCTGTCGTGGTTAAAATGCGACAACTTGAAGGCAAGAAAACTAATGACccgacaaaaataaaaaagagtaAAAAACCGATTGCAACACCAAAGACAACGATTTCTGCAACATCAAAGTCATCAACATCAGTGACCGAAAATACAACAACTTGTTTGATCTGCCAAGACGATAATGACGAAGATTGGGTTCGCTGTCAAGCTTGCAATCAGTGGGCTCATGAAGCGTGTGCTGATGTTGAAGAAGGCTCATTTAGCtacatttgtgatttttgCAGGATGTACGATTAA
- Protein Sequence
- MVRTYKRKTTRGETPIAAFQQAVNAISQEKISLRAAADKFGINFMTLYRYIKKLRLEPVNPPSVGYAKPSKIFTLEQEEELAKYVEDCSKIYYGLTTRDLRKLAYNLAVANKNEIHENWKNDEMASKDWLLAFMKRHQNLSIRIPESTSLSRATAFNRDNVNLFFDNLGAVYDKYKFQPNDVYNVDETGLTTVQKPCKIIARKGAKQVGAITSGERGTLVTMALAVNAVGNSAPPMLIFPRKKFKAFMTANATIGCIGAAYPSGWMTRENFLLFIQHFIKFTRCTKDKPVLLILDNHESHLSIPALNCCKDNGVVLLSFPPHTSHRLQPLDRTVYGPLKKFFNHQADGWLKSHPGVPMSIYDIPTVLREALPLAATPFNIQNGFLCTGIWPFNREIFTDDDFLPSEVTNREYNGDTNKSNMINQPNQVSEQPDRTLTIRHSTPSPQPSTSIAGCSTDVSTRITPQQLNPFPKAPPRKQSVNRRKRKSAILTNTPVKDALEKEAHERENRRSKIKGNGPVKRNLSGNNSKAKKKMIKKNNETYSEESDESEDNEICLICLIPFSQMSEDPEGLISPLMQHQKQALTWLRWRESQEPSGGILADDAGLGKTLTMVSLMLTSKLNEDDNLYRRKRDGGTLVVCPANQLEKWEKKLDTNVEPNFILAMTYHGRNRKDHIKIFNMGKPKPKCDNTFKREILKKAIDKVMSKELSLRKSSEVYNVPKSTLFDYIKKLKRGEEVNLSLKKGRFDPTFIVEYEEALIAHVVDMSNRCMPLTRKEFMKLAFDLAEKLKLNHRFNRAKKSAGKHFYYDFVKRHPELSLRRPESTSLMRAVGFNRPQVDRFFNNLKAIYEKYHFGPSDIYNCDETGVSTVQKQAKVLTHKSNLQVGKLTSAERGKNVTVMFCMSAAGYFIPPLFIFPRQRVNERLMIGAPSESIAVAQPKGWMNAELFLKWLQHFVKFSKPSKEKPVLLVLDGHCSHKDLAVICYAKDNHVQMLSTPPHTTHKLQPLDRVFMKPFKDAYFEACGLWMRANAGARITEYEIAAMVTQAFTRVARLDIAKSGFQCTGILPLNSNVYTDLDFLPSAVTDMPMQSINEGNVCNDADMDTLQDLPPETFDINEKENVKTQPSTSKAIVTVIHQLSPVPNAAAKRTVCRRRKAEKSEILTSSPYKNALVENKATKVKPVVVKMRQLEGKKTNDPTKIKKSKKPIATPKTTISATSKSSTSVTENTTTCLICQDDNDEDWVRCQACNQWAHEACADVEEGSFSYICDFCRMYD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00422123;
- 90% Identity
- iTF_00422123;
- 80% Identity
- iTF_00422123;