Dcer005520.1
Basic Information
- Insect
- Dascillus cervinus
- Gene Symbol
- bab2
- Assembly
- GCA_949768715.1
- Location
- OX458317.1:3690065-3694851[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.2e-11 2.2e-09 38.0 0.0 1 39 377 416 377 420 0.90 2 4 4.3e-12 7.7e-10 39.4 0.1 1 39 431 469 431 473 0.95 3 4 1.8e-16 3.3e-14 53.4 0.0 1 45 486 531 486 531 0.97 4 4 1.5e-15 2.7e-13 50.5 0.0 1 41 538 578 538 582 0.89
Sequence Information
- Coding Sequence
- ATGTCGGGAACGAGCCAGCATTACTGCTTGAGATGGAACAACTATCAAAGTAACATGACGTCTGTGTTCCATCAACTGCTACAAAACGAGGCGTTCGTAGACGTTACCCTTGCTTGTAAAGATTTATCTTTGAAAGCGCACAAGGTAGTTCTGTCCGCGTGTTCCTCGTACTTTCAGAGGCTTCTGTTGGAAAATCCTTGCAAACATCCCACGATCATAATGCCTCAAGATGTTTGTTTCGCTGATCTCAAGTTCATTATCGAATTTGTGTACAAGGGAGAAATTGATGTGTCCCAGGCAGAATTGCAGTCACTGTTGAAAACAGCGGATCAGCTTAAGATCAAAGGTCTTTGCGAATCGCCGGAAGAAAGGAGGAACACGACGAGTTTGCCCCTATTTGCGAGAGGTCGGTCGAAAATCCGTAAGATATCTTCGCCGAAGCAGTTCAAACCTGAGAATCAGAGGAGATACAAATATAAGGATATAGATCAAGAAAATTTTACTGATAGTGACGAAGGCGATTTGGATAGGAGTAATTGCGTTAATTCCAAAGATGAGGACAGTGACGCGCCAATAGTAATTGATGAAGAACCGCGCAGGAAGAAACTAACGGAAACTCAGACTAAACCTCTGAACATGAGCAGCCATGGTCTTTTGGCCGGACAGGCTTTTTTCTCTCAGTTATGTGTGGATAATGATGATTTTCCCCCTGAGCCTCCGGCTCCTTCAGCCACACCAGTTGGCCATGTGGAAATGCAGGAACATTCTCCCACTAGAACATTACTTACCAATACATCATCTCACAGAACTGACCTATCAGatataaatatcaaatatgAAGATattaagaaagaaaatattattaaatttgaaacattgcGACCTTATGATCAAGATTCTATTATGGACATGGAATCATCACATTTATCGGGGCCTGATCACTCGATGGAAGACCATGAGAATGGAAAACACAATCTTCACACAATGATGATCACTCCTGAATTAATGTCAATGGTACCAGGAGATGGTTTGAGTAGACTAGATCCATGCAATAATGAAGGCCTCCTAAAAAGTAATGGGCATATAGAACACATTCCAAGATCTCACGGTGGTGGTCCCAAAACGTGGACGCAAGAAGACATGGATGCTGCTCTTGATGCTTTAAGAAATCACAATATGAGTCTAACAAAGGCTTCAGCAACTTATGGTATTCCATCCACTACATTATGGCAACGAGCTCATAGATTAGGCATAGATACTCCCAAAAAAGAAGGTCCAACAAAATCTTGGACTGAAGAAAATCTCAATTCGGCCCTTGAGGCACTCAGGACTGGAACAATATCAGCTAACAAAGCCAGTAAAGCTTATGGCATCCCTAGTAGCACCTTGTATAAAATAGCAAGAAGGGAAGGAATCAAGCTGGCAGCTCCATTCAATGCAGCCCCAACAACCTGGTCTCCTGAAGATTTGGAAAAAGCTCTGGAGTCAATCCGTACAGGGCAATCATCAGTACAAAAAGCGTCCACTGAGTACGGGATTCCAACAGGAACATTGTATGGGCGATGCAAGAGAGAAGGGATTGAATTGTCACGGTCTAATCCGACTCCATGGTCTGAGGATGCGATGGGTGAGGCATTGGAAGCTGTCAGgttGGGACATATGTCGATAAATCAGGCTGCAATTCACTACAACCTGCCGTATTCATCGTTGTACGGTAGATTTAAACGGGGCATGAAGTACGAGACTGAGGGTATTGATTCGAATTCGGACAGTCAGTCACAGCCAGATTCTCAAGTACTTGTTATGGATTATCCAAATTCCCACCAACAAATTCAATATCAACACCAACCCAACAGCTGA
- Protein Sequence
- MSGTSQHYCLRWNNYQSNMTSVFHQLLQNEAFVDVTLACKDLSLKAHKVVLSACSSYFQRLLLENPCKHPTIIMPQDVCFADLKFIIEFVYKGEIDVSQAELQSLLKTADQLKIKGLCESPEERRNTTSLPLFARGRSKIRKISSPKQFKPENQRRYKYKDIDQENFTDSDEGDLDRSNCVNSKDEDSDAPIVIDEEPRRKKLTETQTKPLNMSSHGLLAGQAFFSQLCVDNDDFPPEPPAPSATPVGHVEMQEHSPTRTLLTNTSSHRTDLSDINIKYEDIKKENIIKFETLRPYDQDSIMDMESSHLSGPDHSMEDHENGKHNLHTMMITPELMSMVPGDGLSRLDPCNNEGLLKSNGHIEHIPRSHGGGPKTWTQEDMDAALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIKLAAPFNAAPTTWSPEDLEKALESIRTGQSSVQKASTEYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGMKYETEGIDSNSDSQSQPDSQVLVMDYPNSHQQIQYQHQPNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00003877;
- 90% Identity
- iTF_00422790;
- 80% Identity
- iTF_00422790;