Basic Information

Gene Symbol
Kdm5
Assembly
GCA_949768715.1
Location
OX458323.1:4663605-4673431[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.9e-25 2.8e-21 76.8 0.0 2 89 118 201 117 201 0.94
2 2 0.34 1.2e+03 1.0 0.0 30 62 1246 1279 1226 1298 0.77

Sequence Information

Coding Sequence
ATGACATCGAAACTTGAAAAAGTTTCAGTAAGTCCTAAAAACCTCCCCAACGGAATAAAATTGAGTGTTACTCCGCCGAAGACCACTGCAAGCACCCTCCTACCCGATACCAAGAGCGAAAGCTTCAAATTCGTGGTCCCACCGGACGCTCCGATCTTCTATCCGACCGAGGAAGAATTCCAAGACCCCCTCGGATACATTAGCAAGATTCGCCCTGCCGCAGAGAATGCAGGGATTTGCAAGATACGACCACCACCTAATTGGCAACCGCCTTTCGCAGTCGACGTTGATAAATTAAGATTCACACCTAGAATACAGAGACTTAACGAGTTGGAGGCCAAAACGCgcattaaattgaatttcttaGACCAAATCGctaaattttgggaattgcaAGGCTCGTCTCTGAGAATTCCGTTGGTCGAGAAGAGGGCTTTAGATCTGTACACCCTGCATCGCCTCGTACAATCGGAAGgAGGTTTCGATTTGGTAACTAGAGACAGAAAATGGTCGAGAGTAGCCACTCGAATGGGTTATCCTTCCGGAAAGGGCTTGGGCACGTCTCTAAAGATGCACTACGAGCGATTGCTGTTTCCGTTTGACGTATTTCGATTGGGAAAGTCGCCTACATTTATAAAAATTGAGCCAAATTTGTCGGACGGGGAGAAGGAAGACAAAGACTATAAGCCGCACGGTATTGTAGGGCGTATGGCCATTAAACCTCCGACTGAGAAGCACGCAAGGCGTTCGAAACGGTTCGAAAATGGTgacattgaaataaaaagtgaaAACCTGAGCATTCAAATCAAGGAAGAACCATATGAGGAAACAGATGGCGAAAACAAAGAGCTCAAACGTTTGCAATTTTACGGAGCTGGCCCCAAAATGGCGGGTTACAACATAGATAAATTAGATGAGAAGTCCCGACCCAAATTCattaattacgattatgatccattgGCCAAATATGTTTGTCATAATTGCGGACGGGGCGACGTTGAAGAATCGATGCTGTTGTGTGATGGTTGTGACGACAGTTATCACACTTTCTGCCTGATGCCTCCTCTTGCTGAAATTCCCAAAGGCGATTGGCGCTGTCCTAAATGCGTCGCGGAAGAAGTGTCCAAACCTACGGAAGCTTTCGGCTTCGAACAAGCTCAGCGAGAGTACACTTTGCAACAATTCGGCGAAATGGCCGACCAGTTCAAGTCTGAATACTTCAATATGCCTGTACATATGGTTCCCACAAACGTTGTAGAGAAAGAATTTTGGAGAATTGTGTCTTCCATTGATGAGGACGTTACAGTCGAATATGGCGCCGATTTGCACACCATGGACCACGGTTCGGGTTTTCCTACAAAAACGTCGCTGAATTTATTCCCTGGCGATCGGGAATACGCAGATTCCAGCTGGAATTTAAATAACCTGCCTGTGTTGGAAGGATCTGTTTTAGGATACATTAACGCCGACATTTCTGGAATGAAAGTGCCGTGGATGTATGTTGGTATGTGTTTTGCGACATTTTGCTGGCATAATGAAGATCATTGGAGCTACTCAATAAACTACCTGCATTGGGGTGAACCCAAAACATGGTACGGTGTTCCCGGCAGCAAAGCCGAGAAATTCGAAGAAACAATGAAGTCAGCTGCTCCGGAACTGTTTCACACACAACCGGATCTCCTCCATCAGTTGGTGACGATCATGAACCCAAATATATTGATGAATGCTGGCGTGCCAGTTTATCGAACTGATCAACATGCCGGCGAGTTTGTTATTACATTTCCACGAGCTTATCACGCTGGATTCAACCAAGGGTACAATTTCGCCGAAGCTGTTAATTTCGCACCTGCTGATTGGATGAAGATGGGTCGTGAATGCATATTACACTATTCACATTTGAGGCGTTTCTGTGTGTTCTCACACGATGAATTGGTTTGCAAAATGGCTTTAGATCCCGATAAGTTGGACCTCACCATTGCTGCATCAACTTATCAAGATATGTTGCACATGGTCGACACAGAAAAGAAGTTGAGGAAGGCTTTATTGGATTGGGGGGTAACTGATGCGGAGCGTGAGGCATTTGAATTGCTACCTGACGATGAACGGCAATGTGACATATGTAAAACTACATGTTTCCTATCAGCCATGACTTGTATGTGCACCCCGAGCACTTTAGTCTGCCTGCGCCATTACGCTTCTCTGTGCAACTGCGCGCCTGAAAAACATACACTTCGTTATCGGTACACGTTGGATGAGTTGCCGCTAATGCTGCAGAAGCTGAAGCTGAAGGCCGAATCGTTCGATAATTGGGTAAACAGAGTCAAAAACGCCTTAGATCCAGACACTCCTAAAACTTTAAACTTAATCGAACTGAAGCAGCTTTTAAGCGAAGCGGACGGCAAGAAGTTTCCCAAATCTGATTTGCTCGAAACTTTGAGGAATGCGGTGGAGGATGCTGAGAAATGCGCGAGCGTTATCCAACAACTGGATCTGAATAAAATCCGAACACGAACTCGCAATTCCGCGGATGGAAAATACAAATTGACCATGGAAGAATTGAATCTGTTTTGCGACGAAATCGATAGTTTAGCCTGCGTTTTGGAAGAGGGCAAACGCATTAAGGAGTTGCGCCAAAAGACTACGGAATTCGAGATTGAAAGTTCCGTTTTACTGAAGACGCCTTTAATGCAGAGCGATGCCACTAATTTGGAGGAGTGTTTAAAACGCGGAAATAGCTTGTGCATTGAATTGCCATCTTTGAAGGCCATTCAGAATCGCTTACTTCAAGTTTCTTGGTTTAAGGAAGTCGTGAACATCGAGCGGAAATCAGAAATGATTACTATAGAAACGGTGCGTTCACTTCTACAGTCTGGCTTGCTTCTTCCCTCAGATCCCGCTTTGGAAAAGGAATTAAAACAATTGCAGATTTTACTTGCCCATAGTGAAAAGTGGGAAGCAAAAgcacaaattttgttaaatagggCCGAGTCTGGGAACATTATAGCTGAAACTGAGCAACTACTTAACGCAGCTCAGGACATCGACGTCTACCTTCCTTCCGAAGACATTTTGACGGATTCCGTAAGTCGCGCCAAAGAGTGGTCGGAACAGTGGAACATTGTGAATGCGGCCGAATATTATCCGTACTTCAATACAGTCGAGGATCTCATTAAAAAAGGGCGAAACATTGCCCTTCATTTGAATGAAGTGGATCGCTTAGAAAATCATCTCACCGCTGCGAAAGTGTGGAAGGAAAAAACCAGCCGCACTTTTTTGCGCAAAAATTGCGCCACTAGTTTGATGGTGGCGCTGTCACCAAGGGCACCCCCTTTAATTCACAGTAAGAAACGTAAAGCCCACGAGGAAGAGTTGCCACGCCTTAAATTGAGCAATGATATGGATCCCGCGGCTGTTGTGGCACTTTTTAAAGACGCAGAGGACACCGAGATTGAAGCCGTAAAGGCTCTGAGGAGTTCtaacttaatgaaaaaattagaGTCGCTTGATGAAGTATTTTGTGTGTGTCAGCGTTCAGCTTTCGGCACGATGATGCAATGTCAGCTGTGCAAAGATTGGTTTCATTCCACTTGTGTTCAGTTGCCTAAAATTGCGACTGTAAAGagtaaagataattttttaaatgccgtTCTTTACATGGGCTTCAAGGATTGCAAGTTCCTTTGTTCGAATTGCCATCGGACACGAAGACCCCGGTTAGAAACAATCTTGAGTCTTCTTGTATCGTTACAAAAACTTTATGTCCGTGTACCTGAAGGAGAAGCTTTACAGTGTCTTACCGAAAGGGCCATGAATTGGCAAGACCGCGCGAGAACCCTCCTGCAGACCTGTGACTTGGAAGCAGCCGTCACCAAGATCTCCATGTTGTCACAAATAGTTAGTGAAAATGCCGCTAgagaaaaatcagaaaaatccATCAGCTTCGAGCAGAAGAAGAATGGAAGCCCTTCACAAGATTCCAGCTCCAGCTCTGACAGTTCCGATGAAAAGAATAGTGACGACACTACAGCGGAAATCTCCAGTCCTGAATTGAGCTCCGTACCTGATGAAATCACCAAAGAATCGTTGATATCCGAAGATTGCATGGACGAGCACGCGTATTCATTGCACTTGTCCAAATGCGAGGAAACCGATTGCACTTTGCAGTTAACTGCCGATGTACGTCAACAACTTGAAGATTTATTAATCGAAGGTGACTTGTTGGAGGTGTCGCTGGACGAAACTTTGCATCTCTGGAAACTGGTGCAGGCTGCTCGTGGCCCCAATGAGACAATCTTGGTGGACcttaatGAATTGGGGATAGATACTCCCACTAAGAAAGGTCGCAAACGTAAGTTGGATGATGCGGACTCGGTTAAAAAGACTAAGCAAGTGAAACCTGAAGTTGAGAAGAAAGTTAAGCAACGTAGATGCAAAGATAAAGAGGCGGGAAAATATGTCGGTAAAACTAGGCGACAGTGTTCGAGCAACAGTTCGGACGATGATGAGAGCGAAGAGAGTTGCGCTTCTTCAGGCTGTTTGAAACCTTCGGGGCAGGAAGTAGACTGGGTCCAGTGCGATGGAGGGTGCGAACAGTGGTTCCACATGGCTTGTGTGGGATTATCAGCGCAAGAAATTAATGAAGATGAGGATTACATCTGCGTCACCTGCTCAGAGAATTCTGTTGTAAGTTTGCCCTCTTCGTCAGACAGTTTAAGTTCAGGTAATGAATCGCCTCCAAACACGACCCACTCTTCCATTACAGAGAGTAGTACCGTGTAG
Protein Sequence
MTSKLEKVSVSPKNLPNGIKLSVTPPKTTASTLLPDTKSESFKFVVPPDAPIFYPTEEEFQDPLGYISKIRPAAENAGICKIRPPPNWQPPFAVDVDKLRFTPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLRIPLVEKRALDLYTLHRLVQSEGGFDLVTRDRKWSRVATRMGYPSGKGLGTSLKMHYERLLFPFDVFRLGKSPTFIKIEPNLSDGEKEDKDYKPHGIVGRMAIKPPTEKHARRSKRFENGDIEIKSENLSIQIKEEPYEETDGENKELKRLQFYGAGPKMAGYNIDKLDEKSRPKFINYDYDPLAKYVCHNCGRGDVEESMLLCDGCDDSYHTFCLMPPLAEIPKGDWRCPKCVAEEVSKPTEAFGFEQAQREYTLQQFGEMADQFKSEYFNMPVHMVPTNVVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSLNLFPGDREYADSSWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSKAEKFEETMKSAAPELFHTQPDLLHQLVTIMNPNILMNAGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWMKMGRECILHYSHLRRFCVFSHDELVCKMALDPDKLDLTIAASTYQDMLHMVDTEKKLRKALLDWGVTDAEREAFELLPDDERQCDICKTTCFLSAMTCMCTPSTLVCLRHYASLCNCAPEKHTLRYRYTLDELPLMLQKLKLKAESFDNWVNRVKNALDPDTPKTLNLIELKQLLSEADGKKFPKSDLLETLRNAVEDAEKCASVIQQLDLNKIRTRTRNSADGKYKLTMEELNLFCDEIDSLACVLEEGKRIKELRQKTTEFEIESSVLLKTPLMQSDATNLEECLKRGNSLCIELPSLKAIQNRLLQVSWFKEVVNIERKSEMITIETVRSLLQSGLLLPSDPALEKELKQLQILLAHSEKWEAKAQILLNRAESGNIIAETEQLLNAAQDIDVYLPSEDILTDSVSRAKEWSEQWNIVNAAEYYPYFNTVEDLIKKGRNIALHLNEVDRLENHLTAAKVWKEKTSRTFLRKNCATSLMVALSPRAPPLIHSKKRKAHEEELPRLKLSNDMDPAAVVALFKDAEDTEIEAVKALRSSNLMKKLESLDEVFCVCQRSAFGTMMQCQLCKDWFHSTCVQLPKIATVKSKDNFLNAVLYMGFKDCKFLCSNCHRTRRPRLETILSLLVSLQKLYVRVPEGEALQCLTERAMNWQDRARTLLQTCDLEAAVTKISMLSQIVSENAAREKSEKSISFEQKKNGSPSQDSSSSSDSSDEKNSDDTTAEISSPELSSVPDEITKESLISEDCMDEHAYSLHLSKCEETDCTLQLTADVRQQLEDLLIEGDLLEVSLDETLHLWKLVQAARGPNETILVDLNELGIDTPTKKGRKRKLDDADSVKKTKQVKPEVEKKVKQRRCKDKEAGKYVGKTRRQCSSNSSDDDESEESCASSGCLKPSGQEVDWVQCDGGCEQWFHMACVGLSAQEINEDEDYICVTCSENSVVSLPSSSDSLSSGNESPPNTTHSSITESSTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-