Basic Information

Gene Symbol
Xbp1
Assembly
GCA_949768715.1
Location
OX458319.1:3762672-3768409[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.6e-13 6.8e-10 39.9 14.4 2 63 41 102 41 117 0.84

Sequence Information

Coding Sequence
atgaGTGCGTCTGTACCGAGTATTTTAAAGTATTTATCAAGTAATAATCACAATATTTTATACGACGATCAAAATAGGaattcaaaaggaaaaaaGAGGCGATTAGACCATTTATCATGGGAGGAAAAACTACAAAGGAAaaaattaaaaaaccggGTGGCGGCCCAAACTTCCCGCGATCGCAAAAAGGCAAAAATGGAAGCAATGGAACAAGCTGTCAATGAGCTTTACGACAAAAATGATGCTTTAGTATTGGACTGCGCAAATTTAAAAGATATAAACAAACAAGTAATGGCGGAAAATGAAGAATTGCGAAGACAATTGGCACAGAGATGCAGCATGTGTTCTCAAAACCGACCTGTCGAGTGTGATGTTCAGAATAGATCTGCAGAATCTTACCCTCTACCGAAGGGTCTCAACAGACACTCAGCAGCGGCTTTGAATACACAAACAATCACAGCTCTGTGGAAGATTATCCTAGCCTGCCTTCTTTACCAGACTTCCTCGACGACCTCGACGCCGACGTCGATATCAGCTCACTGGAACAACTTACACAAAGTTTACTGCAAGATATCGCCACAGACCTGGAAGCTGCTGCTAAAAAAGCAGATTACCAAgaatcaaCAGCTCGTGGATCGAGCAGTCCTACAAAAATGGTGGGGTCGACATCAGAGAACTTGGAATCCAGTGGATGTAAAGGCATAA
Protein Sequence
MSASVPSILKYLSSNNHNILYDDQNRNSKGKKRRLDHLSWEEKLQRKKLKNRVAAQTSRDRKKAKMEAMEQAVNELYDKNDALVLDCANLKDINKQVMAENEELRRQLAQRCSMCSQNRPVECDVQNRSAESYPLPKGLNRHSAAALNTQTITALWKIILACLLYQTSSTTSTPTSISAHWNNLHKVYCKISPQTWKLLLKKQITKNQQLVDRAVLQKWWGRHQRTWNPVDVKA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-