Basic Information

Insect: Danaus plexippus
Gene Symbol: stc
Assembly: GCA_018135715.1
Location: CM030913.1:4511114-4518171[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.4 1.8e+04 -3.8 1.6 15 19 137 141 136 141 0.81

2 14 0.069 5.1e+02 1.1 1.7 2 10 169 177 169 177 0.92

3 14 3.8e-05 0.28 11.5 18.1 4 19 185 200 183 200 0.93

4 14 2.8e-05 0.2 12.0 13.6 1 18 236 253 236 254 0.97

5 14 0.98 7.3e+03 -2.6 0.3 8 11 259 262 258 262 0.86

6 14 5.3e-05 0.39 11.1 12.5 1 19 294 312 294 312 0.99

7 14 0.0001 0.74 10.2 12.2 1 19 353 375 353 375 0.88

8 14 3 2.2e+04 -4.2 1.7 6 10 405 409 405 409 0.95

9 14 0.23 1.7e+03 -0.6 11.2 1 12 415 426 415 426 0.93

10 14 0.053 3.9e+02 1.5 0.4 4 10 430 436 429 437 0.93

11 14 3.8e-06 0.028 14.7 14.0 3 19 444 460 442 460 0.92

12 14 0.038 2.8e+02 1.9 17.2 1 18 499 515 499 516 0.81

13 14 9.7e-09 7.2e-05 23.0 9.9 1 18 552 571 552 576 0.88

14 14 0.028 2e+02 2.4 12.4 1 19 582 605 582 605 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.4	1.8e+04	-3.8	1.6	15	19	137	141	136	141	0.81
2	14	0.069	5.1e+02	1.1	1.7	2	10	169	177	169	177	0.92
3	14	3.8e-05	0.28	11.5	18.1	4	19	185	200	183	200	0.93
4	14	2.8e-05	0.2	12.0	13.6	1	18	236	253	236	254	0.97
5	14	0.98	7.3e+03	-2.6	0.3	8	11	259	262	258	262	0.86
6	14	5.3e-05	0.39	11.1	12.5	1	19	294	312	294	312	0.99
7	14	0.0001	0.74	10.2	12.2	1	19	353	375	353	375	0.88
8	14	3	2.2e+04	-4.2	1.7	6	10	405	409	405	409	0.95
9	14	0.23	1.7e+03	-0.6	11.2	1	12	415	426	415	426	0.93
10	14	0.053	3.9e+02	1.5	0.4	4	10	430	436	429	437	0.93
11	14	3.8e-06	0.028	14.7	14.0	3	19	444	460	442	460	0.92
12	14	0.038	2.8e+02	1.9	17.2	1	18	499	515	499	516	0.81
13	14	9.7e-09	7.2e-05	23.0	9.9	1	18	552	571	552	576	0.88
14	14	0.028	2e+02	2.4	12.4	1	19	582	605	582	605	0.85

Sequence Information

Coding Sequence: ATGCCAAAAGAAAGCCAAGATGTAAGAAATGGTAGAAGTGAAGGGTCAGGAAGGAATCGTAGGTGGATAGGAAGTCAAAGGTTAAAAGGTGCGGAAAGAGATATTTATGAGGATGAACACTATGCAAAGTCTTATTTCCATGCCAAAGAAGAAAGAAATAGGGATAATCTATCAAGTCCGGCCAAAGGGAAGAGTAAAAACTTGTCTAACCCGGGAGCTAACATAGATATGACACAACGTGAGCGCTTAAGCGACCAACTAGACAGGGGAACCCTTGAGTGTCTTGTATGCTGCGAGAGAGTTAAACAAACTGATCCAGTATGGTATTGCGGTAACTGTTATCATGTATTGCATCTCCGCTGTATAAGGAAATGGGCTATAAGTAGCATGATTGAAACAAAATGGCGATGTCCAGCATGTCAAAATGTGAATCAAGACATACCAACCGAGTATAGATGTATGTGTGGTGCGGTCAGGAATCCAGAATACCAGAGGGGATCAAGCGGTGCTCATACATGTGGCAAGTCATGTAAGAGGATGAGGCTCTGCCCTCATCCATGCACACTATTGTGCCACCCTGGACCATGCCCTCCGTGCCAGGCCACTATAAGCAAGCAATGCGGCTGTGGGGCGGAGACGCGTTCAGTGCTATGTAGTAGTAAATTACCGCAAGTCTGTGGAAGAGTGTGTAATAAAAAATTAGAATGTGGGGTTCATTCATGCACTAAACAGTGCCATGAAGAACAGTGCGACCCCTGCGAGGAAATTGTCACACAAGTGTGTCACTGCCCCGCGGCCAAGTCTCGCTCCGTGGCGTGCACGTCACACACGGACCGCACCAGCTGGTCCTGCGGCGAGCAGTGCGGGCGTGTGTTGTCATGCGGAGCGCACGTGTGTCGCGCGACCTGCCACGCCCCGCCCTGCCCTGCGTGTCCCCTCACACCCGACAACGTACCGGCCTGTCCGTGTGGCAAGACTAGGATCAATAAAGATCAGCGCAAGACTTGCGTGGACCCCATACCGCTCTGTGGCAACATTTGTGCTAAGCCTCTACCGTGCGGGCCGGCGGGCGACAAGCATATATGTAAAGAGAGCTGTCACGAAGGTGGTTGCCGCGTCTGTCCCGACACAACTCTGCTGCAGTGCCGTTGCGGTCACTCGAGCCAAGAGGTGCCGTGTGCTGATCTGCCGCAGATGATCAACAACGTATTGTGTCAGAGAAAATGTAACAAGAAGTTGTCATGCGGCCGTCACCGCTGTCATACCCGGTGCTGTGACTCTGCCACTCATCGCTGCGCCGTCGTCTGCGGCCGTTCTCTCTCATGTCAGCTCCACAGATGTGAGGAGTTCTGTCACACTGGACACTGCGCGCCCTGTCCGAGAGTCAGTTTCGACGAGCTCCATTGTGAGTGTGGCGCGGAGGTGCTGATGCCGCCGGTCCGCTGCGGCACCAAACCACCCGCCTGCAGCGCCCCCTGCCGCAGGAGCAGACCCTGCGGTCACCCGCCGCACCACTCGTGCCACTCCGGCGATTGCCCGCCATGCGTCGTGCTTACAACTAAAATGTGTTACGGAAAACATGAAGAACGGAAAACAATACCGTGTTCTCAAGAAGAATTCTCCTGCGGCCTGCCGTGCGGGAAACCTCTTCCTTGCGGTAAACACACTTGTATCAAAATATGTCACAAGGGATCTTGTGATATAAGCACATGTAGTCAACCCTGCACATCCAAACGGCCGAGTTGTGGTCACCCGTGTGCTGCGAGGTGTCACTCTAGCGGCGGGGGCTCCTGTCCCAGTGCGGCGCCCTGTCGCCGGCCAGTACGAGCCACCTGCCAGTGTGGACGAAAACAAACAGAGCGATCTTGCTGCGATAACGCCAGGGACTATGCCAAGATGATGAGTACCCTAGCGGCAACGAAAATGCAAGAGGGTGGCACTGTGGATATATCAGATGTTCAACGACCCGGATCAATGCTCAAAACATTGGAGTGTGACGAGGAGTGCTTCGTAGAGGCTCGGAGCCGTCGCCTGGCTTTGGCACTTCAGCTGCGAAATCCTGACGTATCGGCCAAGCTCGCGCCTCGATATAGCGATCATCTACGAACAACGGCCGCCAGGGAACCAACCTTCGCACAACAAATACACGACAAGCTGACGGAACTCGTACAATTAGCCAAAAAGTCCAAACAGAAGACGAGAGCACATTCATTCCCATCTATGAACCGCCAAAAGCGTCAGTTCATCCACGAGCTGTGCGAACATTTCGGATGCGAAAGTGTTGCGTATGACGCTGAACCTAACAGAAACGTCGTTGCTACAGCCGACAAGGAAAAGTCTTGGCTGCCGGCTATGAGTGTACTGGAGGTGTTATCCCGAGAGGCTGGTAAGAGACGTGTACCCGGGCCGGTACTACGAGCGCCCGCCGCCGCCCTACCACCAACAAAGGAAATACCATCCACCACCTCAAAGTCCTCATCGGGTGGCTGGGCAACGCTCACATCTACTAACGCGTGGGCGGCCCGCAGTCAGCCCAAGAAGGAAGAAACCAAAATTGACTATTTCGATAACCCTCCAGAGTAA
Protein Sequence: MPKESQDVRNGRSEGSGRNRRWIGSQRLKGAERDIYEDEHYAKSYFHAKEERNRDNLSSPAKGKSKNLSNPGANIDMTQRERLSDQLDRGTLECLVCCERVKQTDPVWYCGNCYHVLHLRCIRKWAISSMIETKWRCPACQNVNQDIPTEYRCMCGAVRNPEYQRGSSGAHTCGKSCKRMRLCPHPCTLLCHPGPCPPCQATISKQCGCGAETRSVLCSSKLPQVCGRVCNKKLECGVHSCTKQCHEEQCDPCEEIVTQVCHCPAAKSRSVACTSHTDRTSWSCGEQCGRVLSCGAHVCRATCHAPPCPACPLTPDNVPACPCGKTRINKDQRKTCVDPIPLCGNICAKPLPCGPAGDKHICKESCHEGGCRVCPDTTLLQCRCGHSSQEVPCADLPQMINNVLCQRKCNKKLSCGRHRCHTRCCDSATHRCAVVCGRSLSCQLHRCEEFCHTGHCAPCPRVSFDELHCECGAEVLMPPVRCGTKPPACSAPCRRSRPCGHPPHHSCHSGDCPPCVVLTTKMCYGKHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKICHKGSCDISTCSQPCTSKRPSCGHPCAARCHSSGGGSCPSAAPCRRPVRATCQCGRKQTERSCCDNARDYAKMMSTLAATKMQEGGTVDISDVQRPGSMLKTLECDEECFVEARSRRLALALQLRNPDVSAKLAPRYSDHLRTTAAREPTFAQQIHDKLTELVQLAKKSKQKTRAHSFPSMNRQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLSREAGKRRVPGPVLRAPAAALPPTKEIPSTTSKSSSGGWATLTSTNAWAARSQPKKEETKIDYFDNPPE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -