Basic Information

Gene Symbol
gatad1
Assembly
GCA_018135715.1
Location
JAEQBL010000023.1:1282388-1285341[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-09 4e-06 26.6 3.7 1 30 6 33 6 37 0.95

Sequence Information

Coding Sequence
ATGCCTAAACCGACTTGTGTTCAATGTAATACAAACGATTCCCTACTATGGCGAAGCGCTGAAAACGGACAAATATGCAACGAATGCCACTTAGCAAATACCGCAAGTAGTGAAACAAATTTAGATACGGCCATCAAAACCGAAAACGATGACAAGAAAGAAGACAAAGACGATTGTGATAGTAAGAATGGAAAAAATGAAGGCGAGACCACTCCAGCAAAAGCAACGGGTAAAGGTACGAGGAAAAGCACTCGTTCTACAAGGTACAAAGCTAAAGGACCAACAGTGAACCAATCAAAACCACCGGCACCCCGTGGTAGAGGTCGCAGAAGTATATTTAAGAGACAACCATTGAAAGCCCCAACAGCGACGGCTACAGTTGTTGCGAGTGAATCAGTATTCTTCAAGGGTACATACATTCAAGTTGGCGATATAGTTTCAATGATAGACATTGACGGCGGCACATACTATGCACAGATAAGGGGCTTCCTTACAGATCAGTACTGCGAGAAAAGTGCAGTAGTCACTTGGCTGCTACCAACACAGGCCAGTCCGCCCCCAGACCAAAGTTTTGATCCAGCTACATACATTATAGGTCCAGAAGAAGATCTTCCTCGTAAACTGGAATATATGGAATTTGTAATGCATGCACCTTCAGACTATTATAAATCTAGTACAAGCCCATATCCCCTCACCGACAGGGAGCTAAATAACCATAGTGGTTTCATATGGACCTCTATGGAATCTAAGGAAAGAGGATAA
Protein Sequence
MPKPTCVQCNTNDSLLWRSAENGQICNECHLANTASSETNLDTAIKTENDDKKEDKDDCDSKNGKNEGETTPAKATGKGTRKSTRSTRYKAKGPTVNQSKPPAPRGRGRRSIFKRQPLKAPTATATVVASESVFFKGTYIQVGDIVSMIDIDGGTYYAQIRGFLTDQYCEKSAVVTWLLPTQASPPPDQSFDPATYIIGPEEDLPRKLEYMEFVMHAPSDYYKSSTSPYPLTDRELNNHSGFIWTSMESKERG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00205730;
80% Identity
-