Basic Information

Insect: Danaus plexippus
Gene Symbol: -
Assembly: GCA_018135715.1
Location: CM030926.1:551374-555981[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.018 1.3 9.9 0.0 2 23 203 224 202 224 0.96

2 12 0.00012 0.0084 16.8 7.5 1 23 230 252 230 252 0.98

3 12 0.022 1.5 9.7 1.2 1 23 265 287 265 287 0.96

4 12 0.00028 0.019 15.7 2.0 1 23 515 537 515 537 0.98

5 12 0.23 16 6.5 2.7 2 23 543 565 542 565 0.95

6 12 0.0016 0.11 13.3 2.5 2 21 574 593 573 595 0.94

7 12 0.0016 0.11 13.3 3.0 2 23 599 620 598 620 0.97

8 12 0.013 0.9 10.4 1.4 2 23 634 656 633 656 0.96

9 12 0.00077 0.054 14.3 1.8 1 23 662 684 662 684 0.97

10 12 0.011 0.75 10.7 3.0 3 23 692 712 691 712 0.97

11 12 0.15 10 7.1 1.8 1 23 718 741 718 741 0.95

12 12 0.063 4.4 8.3 1.9 1 23 745 768 745 768 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.018	1.3	9.9	0.0	2	23	203	224	202	224	0.96
2	12	0.00012	0.0084	16.8	7.5	1	23	230	252	230	252	0.98
3	12	0.022	1.5	9.7	1.2	1	23	265	287	265	287	0.96
4	12	0.00028	0.019	15.7	2.0	1	23	515	537	515	537	0.98
5	12	0.23	16	6.5	2.7	2	23	543	565	542	565	0.95
6	12	0.0016	0.11	13.3	2.5	2	21	574	593	573	595	0.94
7	12	0.0016	0.11	13.3	3.0	2	23	599	620	598	620	0.97
8	12	0.013	0.9	10.4	1.4	2	23	634	656	633	656	0.96
9	12	0.00077	0.054	14.3	1.8	1	23	662	684	662	684	0.97
10	12	0.011	0.75	10.7	3.0	3	23	692	712	691	712	0.97
11	12	0.15	10	7.1	1.8	1	23	718	741	718	741	0.95
12	12	0.063	4.4	8.3	1.9	1	23	745	768	745	768	0.96

Sequence Information

Coding Sequence: ATGGAAGCAACTTTCGACAAATTTAAAGGAATAAAAACGTATTCTAGAGTAAATAATGTTAAATCAAACAATCAGACTGTTACCGTGAATTCTACAGATAAAAAAGTACCTTTAACTACCAAGAACGCTGTAAAATTTCTTCTAGAAGGAACTCTAAGGTTAAAAGTCTGTAGGTATTGTCTTAGCGTCACTACTTCACTATCTGAATTGGATGAAATTCTGGTGATAGCTGTAAATAGCGCACTGCACGAGGTCACCATACGTGATATGGTAGCAAGCTTCCATCCTTTCAAGGTTACCGATGATAAAAATTTTCCAAACAAGATATGTTCAGATTGTTTGAACCGAACAATGAATTGCTACCTGTTTGCCCAGCAATGTGAACGATCCGAAAGATCATTACGGAATTGTTTCGAGGATATGTATGATAAATTTGAGAAACTTGATCCGATCGAACCCGTAAAACGGAGAGGCAAACCTAAATTGAATCCCAACTGTAACATTTTGTACACAGAACACAACGAAGTCATGAATTACGCTGAACCCATAATAAATATTATCAACACTGATACTGTTGCCATAGAAGATAATTTCATCACTGAGTTGGAATGCCAGAAATGTTGGCAAGTTTTACCGACGGCAGAATCACTATTAAATCATGAGAAAATACATCCGAAATCCATGTGGTACAACTGTAGGTTGTGTGGGAAGTCGTTTGTTAAACGATGCCATTTGAAGAAACATTTAAAATCTCACAGACAACTCAGTAATTCGGATAACACTGAAACTTCATACAAATGCAATGACTGCGGCATCAGCAGCGACACATTATCAGATCACTATCAGCACATAGAGAAACACAAGTTCAAAGATATGTTTGAGCATTTAATTGAGGGGAATATTGGTAGCTTTTGTGCTATCTGTATGGATAAAGGTCTGAAAATGGTCGAGTTGTCCGAAATGGTACATTTACACGGAGGTTATCCCGCTTTAAGTAGGGACTTGACCATTCAGAATGTATTGACAGCAACCATTCCTGGTATTCAACTCGATAGCTACATGGGGAATAAAATCTGCGACAGCTGTGTCAATCACGCTCTGAACACGTATATATTTATAAGCAAAGTACAATATGTCCGGAACAGATTGAACACTTCGGTAACACTTATGTTGGATAATCTGAATATAGATGATCCAGAGAGTAATGTTATGGTCGAAATATCTAAGGAACTGATACTACCATCTGTAAAAGATGCTGATGATACAGATGATTCAGATGAATCCGACTACAAAGTAGAGGTTTTAGAAGACGAATTCCGGGTAGAATACAGCGAGAGCGGGTCGGAATCGGATTTTAAAGAGGATTCTATAGCCTTGAGCAACGATATCCAAGATCAACTCAAAAATGTCACTAAGACATACAGCAAGAAAGTTTTCAATGGATTTCAAATGAAGAATGATGAAGACAGTCTAGACGTTTGCAGCGAATTCCTAACTTTCAAGAAGAGAGTGAAAACCAGAAAACGCGCCCCAAAAATACGTTACACCTGCCCATTCTGTAATAAAAACTTCATATCAGATTACTTCCTCAAGAAGCACGCTCTGAAACACATCAACGGGACGGTTGAATGCGACTTATGTTACGACCAGTTCAAATCGAAGTTCCATCTCTTCGAACACAAGAAGATGATGCATCTATTGCAATCACAGAACTATATGACGTGCAACATCTGCGGTAGAACCTTCGAAACTGCGAACAAAATGAAAATACATCAGAAATGCCACAGATATAAGGAGTGCCACCTGTGTAACAAATATTTCATCAGCCAGAAGTACTATGACATTCATATGCAACGGCACGCGGCCAGGTTCAACACATACAGGAACAGGGACGAACAGACATGTAGTTTTTGCGAGAAGGCCTGTTCCAACGAAAACGAACTCTCTCTCCATGTCAATAAAGTCCATTTACAGATAAAACCGTACAGTTGCGATATGTGCGAAAAGCAGTATTACACGGAATACAACTTGCTGAGTCACAAAAAGCTTCACAGTCTACCATGCAAGGAGATTTGTGAATTTTGTAACAGAGTATTCAAATGTAGGAAGAATTTGGTCATACACGTCAGAAAGCATATAGGCATAAAACCACACAACTGTCCTGTTTGCAGACAAGCATTCTATTCAGACAGCATAATGAAGAATCACATGAAAAATTACCACGGAGGTAAATTCTGTTGTAGATTATGCCGGACTGTTCTCCAGAGCCAGTTCGATTTGAAAACTCATATAAACGTTGCCCACAGTTCCATGTAG
Protein Sequence: MEATFDKFKGIKTYSRVNNVKSNNQTVTVNSTDKKVPLTTKNAVKFLLEGTLRLKVCRYCLSVTTSLSELDEILVIAVNSALHEVTIRDMVASFHPFKVTDDKNFPNKICSDCLNRTMNCYLFAQQCERSERSLRNCFEDMYDKFEKLDPIEPVKRRGKPKLNPNCNILYTEHNEVMNYAEPIINIINTDTVAIEDNFITELECQKCWQVLPTAESLLNHEKIHPKSMWYNCRLCGKSFVKRCHLKKHLKSHRQLSNSDNTETSYKCNDCGISSDTLSDHYQHIEKHKFKDMFEHLIEGNIGSFCAICMDKGLKMVELSEMVHLHGGYPALSRDLTIQNVLTATIPGIQLDSYMGNKICDSCVNHALNTYIFISKVQYVRNRLNTSVTLMLDNLNIDDPESNVMVEISKELILPSVKDADDTDDSDESDYKVEVLEDEFRVEYSESGSESDFKEDSIALSNDIQDQLKNVTKTYSKKVFNGFQMKNDEDSLDVCSEFLTFKKRVKTRKRAPKIRYTCPFCNKNFISDYFLKKHALKHINGTVECDLCYDQFKSKFHLFEHKKMMHLLQSQNYMTCNICGRTFETANKMKIHQKCHRYKECHLCNKYFISQKYYDIHMQRHAARFNTYRNRDEQTCSFCEKACSNENELSLHVNKVHLQIKPYSCDMCEKQYYTEYNLLSHKKLHSLPCKEICEFCNRVFKCRKNLVIHVRKHIGIKPHNCPVCRQAFYSDSIMKNHMKNYHGGKFCCRLCRTVLQSQFDLKTHINVAHSSM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00419296;
90% Identity: iTF_00419296;
80% Identity: -