Basic Information

Insect: Danaus plexippus
Gene Symbol: -
Assembly: GCA_018135715.1
Location: JAEQBL010000033.1:500688-502484[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0013 0.089 13.6 2.3 1 23 25 47 25 47 0.96

2 16 0.61 43 5.1 1.1 3 23 77 98 75 98 0.90

3 16 0.0097 0.67 10.8 0.7 2 23 119 140 118 141 0.93

4 16 0.0007 0.049 14.4 1.7 2 23 147 169 146 169 0.95

5 16 0.0023 0.16 12.8 1.1 1 23 174 197 174 197 0.95

6 16 0.46 32 5.5 0.1 2 23 200 222 199 222 0.93

7 16 0.044 3.1 8.7 2.0 2 21 229 248 228 249 0.93

8 16 0.00092 0.064 14.0 0.8 1 23 305 328 305 328 0.92

9 16 5.4 3.8e+02 2.2 0.1 3 23 357 378 355 378 0.91

10 16 0.42 30 5.6 0.2 3 23 402 424 400 424 0.93

11 16 0.00035 0.024 15.4 0.6 3 20 431 448 429 452 0.90

12 16 0.009 0.63 10.9 0.4 1 23 457 480 457 480 0.97

13 16 0.00053 0.037 14.8 0.4 2 23 486 508 486 508 0.94

14 16 2.6e-05 0.0018 18.9 4.7 1 23 512 535 512 535 0.97

15 16 0.00011 0.0077 16.9 0.6 2 23 542 563 541 563 0.96

16 16 0.002 0.14 13.0 2.6 1 23 569 591 569 591 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0013	0.089	13.6	2.3	1	23	25	47	25	47	0.96
2	16	0.61	43	5.1	1.1	3	23	77	98	75	98	0.90
3	16	0.0097	0.67	10.8	0.7	2	23	119	140	118	141	0.93
4	16	0.0007	0.049	14.4	1.7	2	23	147	169	146	169	0.95
5	16	0.0023	0.16	12.8	1.1	1	23	174	197	174	197	0.95
6	16	0.46	32	5.5	0.1	2	23	200	222	199	222	0.93
7	16	0.044	3.1	8.7	2.0	2	21	229	248	228	249	0.93
8	16	0.00092	0.064	14.0	0.8	1	23	305	328	305	328	0.92
9	16	5.4	3.8e+02	2.2	0.1	3	23	357	378	355	378	0.91
10	16	0.42	30	5.6	0.2	3	23	402	424	400	424	0.93
11	16	0.00035	0.024	15.4	0.6	3	20	431	448	429	452	0.90
12	16	0.009	0.63	10.9	0.4	1	23	457	480	457	480	0.97
13	16	0.00053	0.037	14.8	0.4	2	23	486	508	486	508	0.94
14	16	2.6e-05	0.0018	18.9	4.7	1	23	512	535	512	535	0.97
15	16	0.00011	0.0077	16.9	0.6	2	23	542	563	541	563	0.96
16	16	0.002	0.14	13.0	2.6	1	23	569	591	569	591	0.97

Sequence Information

Coding Sequence: ATGCGTAGGAGAAAGAATCTTCAGATGTTGTTTAATAACACCACAGTGATACCCTTCAAATGGAGAGGGAAATATCTCTGTTTTTATTGCAGCAAAAATATAACGGACTATTCGGAGTTACGTAAACATACAAAATCACATGGGCCTTGCTCCACTGACGATCATTCGCTCAAAGTGCTAAAGGGTGGGAAGAATATGGAAATTAAAATTGACGTATCGGATATTTGTTGTGAGGTTTGCAACGAAGAATTTAAAATTCTGGACGATGTATTGGATCATCTGTGCGCGAAACATAAATTTGAATACGACAGAAGCGTGGAAATGGCGATTGAAGAGTATCGCTTAATGGATTTAAGCTGTCTGATATGTAACGAGAAGTTCGCGTATTTCGGTTATTTAGTGTCCCATGTCAACAATCACCATCCGAAGAACTGTCTCATATGCGACAAATGCGAACAGAAATTCAATAAGAAAAGGGATTTATTTTCCCACATAAAAAACTACCATCGAGACGGAGGATACAAGTGCGATATTTGTCCCCAGAACTTTAGTTCTCTAAATATCCTGCGGAAACATAGAAGCAATCGACATTTCACGAGATGCAACATCTGCCAGCTGAGATTGCCGTCAGCTGTTCTTAAACAGAAGCATATAGAATTGGAACATCCTGATGACGGATCGTTGCAATGTGATACGTGCTACAAGGACTTCCACACTAAGCAAGGTCTTAAAATGCACTCGAGGAAATGTAAAGGCGATATCTTCGACGTTGCTATCAAGAAGGAGGAATGCGACGGTCTTGACATTGATCAGGAGGAGATAAAACGACCGAGTGTCAAACAGATCCGCGAAAACATCGTGATAGTCATAAATATGTCGACAGCTATACCGTTTAATTTCTACAAGAACAAATTCAATTGCTTCTACTGTTCCAAAGACTTCACCGATTCGGATTCAATGCGGGAGCATACTGTTATCGAGCATCCGATTTGCGATGTCAAAGAAAAGTGTATTAGAAAATGCAGGGAATCGGTTGCTTGTGTGAAAATAGATATTTCGAGTTTAGCTTGTAAGGTGTGCTTTGAAACGATGGATAGTTTAGACGTTTTGTTAGATCATCTCATAACGAAACATGAAGCTAATTACGACAAATCTATCACGACTTGCCTCCAACCTTACAGACTCGTAAAAGATCATATGGCGTGCCCCAACTGTCCAACCGAGGTGTTCAGATTCTTTGGCACGTTGCTTAAACACGTTAACAACAAGCACACAGATAACAATATTATATGTGTGTACTGCGGGCAGACTTTTCGGCGAGATCAAAATCTACGCGTTCATATATGGAGACATCACAGGGACGGTAGATTCAAATGCAACATATGCGGTGCGGATTGCAACATACCGTCTAGGCTGTACATGCATATGGCGAAAGCTCATGGCGTTAAAGCGGCGAAGTGTCCTAAATGCTCGGAATCTTTCGCCACCCAGTATCTAAGGCAGAAGCATCTGATAGAAGCTCACGATTCTGGCCACAAGTGCTCATATTGCGGTAAATTGTTTACGCGGAATTCATTTATGCGGGATCACATACGTCGGACGCATCTCAAGGAGAAGAATGTCGAATGTTCGATTTGCAATATGAAGTTTTTCAACAATATTCTGTTGCGACGTCACATGGTTAAACATAGCGGGGAGAAAAATTTTCATTGTGACATGTGTGGCGAACGATTTTATTGGAGGAAGAGCTTGAGAACTCACATGGCGAGGCACAGCAAGCATAATCCTGTCACATAG
Protein Sequence: MRRRKNLQMLFNNTTVIPFKWRGKYLCFYCSKNITDYSELRKHTKSHGPCSTDDHSLKVLKGGKNMEIKIDVSDICCEVCNEEFKILDDVLDHLCAKHKFEYDRSVEMAIEEYRLMDLSCLICNEKFAYFGYLVSHVNNHHPKNCLICDKCEQKFNKKRDLFSHIKNYHRDGGYKCDICPQNFSSLNILRKHRSNRHFTRCNICQLRLPSAVLKQKHIELEHPDDGSLQCDTCYKDFHTKQGLKMHSRKCKGDIFDVAIKKEECDGLDIDQEEIKRPSVKQIRENIVIVINMSTAIPFNFYKNKFNCFYCSKDFTDSDSMREHTVIEHPICDVKEKCIRKCRESVACVKIDISSLACKVCFETMDSLDVLLDHLITKHEANYDKSITTCLQPYRLVKDHMACPNCPTEVFRFFGTLLKHVNNKHTDNNIICVYCGQTFRRDQNLRVHIWRHHRDGRFKCNICGADCNIPSRLYMHMAKAHGVKAAKCPKCSESFATQYLRQKHLIEAHDSGHKCSYCGKLFTRNSFMRDHIRRTHLKEKNVECSICNMKFFNNILLRRHMVKHSGEKNFHCDMCGERFYWRKSLRTHMARHSKHNPVT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01198043;
90% Identity: iTF_00420738;
80% Identity: -