Dple010814.1
Basic Information
- Insect
- Danaus plexippus
- Gene Symbol
- -
- Assembly
- GCA_018135715.1
- Location
- CM030924.1:2235817-2239187[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.065 4.6 8.2 0.2 5 23 346 364 345 364 0.96 2 11 0.00086 0.06 14.1 0.2 3 23 372 392 370 392 0.95 3 11 7.2 5e+02 1.8 1.9 2 23 400 421 399 421 0.85 4 11 4e-07 2.8e-05 24.6 0.9 2 23 426 447 426 447 0.98 5 11 0.0014 0.098 13.5 6.0 1 23 453 475 453 475 0.98 6 11 0.00034 0.024 15.4 0.2 1 20 479 498 479 500 0.94 7 11 0.00017 0.012 16.3 0.2 1 23 533 556 533 556 0.96 8 11 0.00042 0.029 15.1 0.5 1 23 576 598 576 598 0.97 9 11 0.00016 0.011 16.4 3.5 1 23 604 626 604 626 0.98 10 11 0.00048 0.034 14.9 0.2 3 23 634 654 632 654 0.98 11 11 1.6e-05 0.0011 19.5 0.8 1 23 660 683 660 683 0.97
Sequence Information
- Coding Sequence
- ATGAAACGTTTTAATATGGATTCGTTTACAAATTTGTGTCGAAGCTGTCTTAGTCCAGAAACTGGAGTGTCACTTTGTGATAATGAAGACAATATCAAAGAGAAATTCTTCGAAGTTACCACTGTCGAGGTCAAGGAAGATGATGGCTTACCTCAAAAGCTTTGCAATGACTGTTTCACTCTTATGACATCAGCATATCAATTTCGCAATCAATGCATGAAAATGGATAAAGAACTTAGGCTTCAATTAGAAGCTTACATCAATGAGAGCGCAGAACAATTTTCACAAATAGAAACACAACTAAAGGCCAGCGAGGACATGACGATAGAGGATATAGCTAAAGAATCAATGAAACAATTGGAATCTATTATTAAGAGCGAGCCTAATGATAGTGACGATGATTATTATTATGTGGTTGTAGTCGACAACAATAAAGATGATGAGAGTGATAAAAGCAACAGCAACAGTGCGGTTACACAATCCATTAAAAAAGAAAGTACCACTGAAGACATCATAATGAAGACTTCCGACCCTAGCACACAGTTTGAGAATTGTATAGATTCATTTCTAGTGACAAATCCAAAAGTGCCAAATAATGTACCAGCGACCATCCTTGAGAACGAGGAACAAGAAATAGATGAAAATTTTACCAGCGTAGATGAATTATCTCAGGACCATTCTCTCGGTATAACAGAAGACTCTCAAGATAAGAGTGATGATTACACTGTGGCTGTGCCACAAAACATGAAGAATAACATAGGGAACTCTAAAAGTTACATCAAAATTCTTACCCCATCTGGCGCAGAAAGAACAATACTTGTGAAAAATGAAGATGGTGTTAAATATTTAACAGATGCTCAGCTCCTTAAGGATGGTACGGATTCTTTGTCTCAAGAAGAAGTTATTTTTTATGAAGGTGATGATGCATCACAGTTGCAGATACTGAAATGTGATGGTTCCGAGTTAGTTATAGAGTATGCTGATGACAGTCAGATAGCAACAGTTTTGCAACAAGAAGATGGCACTTTCTTGTGTGATTGCGGTGAACAGTTTGATGATTTTGCCGAATATGAAAAACATCAATACAAACATAACCCGGCTGGAGAACATTTGTGTAATTTATGTGGTAAAGGCTTCGAAACTGCTGAAGTTCTGACCGGGCACATGCTGTTACATAGCGTGACAAGTGTATATGTTACATGTCCATTCTGTTGCCAAAAAGTAAGGAGAAACAGTCTCACGCAACACATAAAATATGTACACAATACAAAACCACAATGTGATATCTGTTCAAAGACATTTGCAAATCAAAATAATTTAAAAAGGCATTTGATGATACACAGCGGGATAAAAGATTTTGAATGTGATATATGCCACAAGAGGTTCCATCAAAAAATAACCATGCAAACGCACAGACTGACACATGTCAATCCATTCACATGCAATCAATGTGGACTACAATTCAGCGAAAAAGCCGATTTAACTGCCCATAAGAGTTCAGAAGAGTGCAGTAAGACAAGAATAACCAAAGTTAAGGAGGAATTAATGAAGACTGTGAAACAGGAAGTCGTATCCAACCTCGGAAAGTTATTAGGCTATGCCTGTTCGTTATGCAAAAAAATGTTTACGCTTGAATCTGCTTTAGAGCAACATGTAGAAACTACACATATTTTCGAAAATGAGGAACAACATTTGGAGAAGGTCCCAAAGAAGAGCAACAAAAAGTTTGACTGTCGAATATGTGGGAAGAGTTGTGCCAGTCAGGCGATGATGATCATGCATGAAAGGGTGCACACGAACGAGAGACCGTTCCCTTGCCAACTTTGTGCACTGAGATTCAAAACAAAAACTCATTTGCGTACACACCAATTGACACATACGAGGGAGAAAAAATTTGGGTGCTCTGTTTGTTTGAAATTTTTCGCACTAAAAGGTAACCTGGTTGTCCATTTAAGAACACATACCGGGGAGAGACCGTACGTATGTTCCATATGTGGCGAAGCTTACATAGACTCTAAATATCTTAAAAAGCACAAACAAAAGAAACATGCCATAGACAATGTTCCTTGGAATACATATTAA
- Protein Sequence
- MKRFNMDSFTNLCRSCLSPETGVSLCDNEDNIKEKFFEVTTVEVKEDDGLPQKLCNDCFTLMTSAYQFRNQCMKMDKELRLQLEAYINESAEQFSQIETQLKASEDMTIEDIAKESMKQLESIIKSEPNDSDDDYYYVVVVDNNKDDESDKSNSNSAVTQSIKKESTTEDIIMKTSDPSTQFENCIDSFLVTNPKVPNNVPATILENEEQEIDENFTSVDELSQDHSLGITEDSQDKSDDYTVAVPQNMKNNIGNSKSYIKILTPSGAERTILVKNEDGVKYLTDAQLLKDGTDSLSQEEVIFYEGDDASQLQILKCDGSELVIEYADDSQIATVLQQEDGTFLCDCGEQFDDFAEYEKHQYKHNPAGEHLCNLCGKGFETAEVLTGHMLLHSVTSVYVTCPFCCQKVRRNSLTQHIKYVHNTKPQCDICSKTFANQNNLKRHLMIHSGIKDFECDICHKRFHQKITMQTHRLTHVNPFTCNQCGLQFSEKADLTAHKSSEECSKTRITKVKEELMKTVKQEVVSNLGKLLGYACSLCKKMFTLESALEQHVETTHIFENEEQHLEKVPKKSNKKFDCRICGKSCASQAMMIMHERVHTNERPFPCQLCALRFKTKTHLRTHQLTHTREKKFGCSVCLKFFALKGNLVVHLRTHTGERPYVCSICGEAYIDSKYLKKHKQKKHAIDNVPWNTY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00420742;
- 90% Identity
- iTF_00420742; iTF_00419195; iTF_00419196; iTF_00419936;
- 80% Identity
- -