Basic Information

Insect: Danaus plexippus
Gene Symbol: -
Assembly: GCA_018135715.1
Location: JAEQBL010000032.1:432453-437260[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.0055 0.38 11.6 3.6 2 21 162 181 161 182 0.93

2 27 7.9 5.5e+02 1.6 0.6 3 23 190 210 189 210 0.83

3 27 0.065 4.6 8.2 1.9 1 23 215 238 215 238 0.95

4 27 0.0042 0.29 12.0 2.1 2 23 244 265 243 265 0.95

5 27 0.18 13 6.8 2.7 2 21 269 288 268 289 0.93

6 27 0.0017 0.12 13.2 0.4 2 23 333 355 332 355 0.95

7 27 0.0028 0.19 12.5 1.4 1 23 388 410 388 410 0.98

8 27 0.0051 0.35 11.7 0.8 1 23 416 439 416 439 0.97

9 27 0.014 0.97 10.3 0.5 1 23 448 471 448 471 0.88

10 27 0.081 5.6 7.9 5.7 1 23 480 502 480 502 0.98

11 27 0.00011 0.0076 16.9 0.5 2 21 626 645 625 646 0.94

12 27 4.2 2.9e+02 2.5 0.1 3 23 652 672 651 672 0.91

13 27 0.15 11 7.0 2.7 1 23 677 700 677 700 0.95

14 27 0.014 0.98 10.3 0.2 2 23 706 727 705 727 0.96

15 27 1.2 84 4.2 2.9 1 20 730 749 730 751 0.92

16 27 0.00088 0.061 14.1 1.4 1 23 763 786 763 786 0.93

17 27 0.0004 0.028 15.2 4.8 1 23 792 814 792 814 0.97

18 27 6.1 4.3e+02 2.0 0.3 1 23 848 871 848 871 0.74

19 27 0.0047 0.33 11.8 0.5 2 21 995 1014 994 1015 0.93

20 27 2.9 2e+02 3.0 0.0 3 23 1022 1043 1021 1043 0.96

21 27 7.7e-05 0.0054 17.4 0.7 2 23 1077 1098 1076 1098 0.97

22 27 1.6 1.1e+02 3.9 1.5 2 21 1102 1121 1102 1122 0.91

23 27 0.00018 0.012 16.3 2.1 1 23 1148 1171 1148 1171 0.96

24 27 6.7e-05 0.0047 17.6 0.4 1 23 1177 1199 1177 1199 0.97

25 27 0.11 7.4 7.5 0.1 1 23 1205 1227 1205 1227 0.97

26 27 0.0013 0.092 13.5 0.4 1 23 1233 1256 1233 1256 0.94

27 27 8e-05 0.0056 17.4 5.7 1 23 1262 1285 1262 1285 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.0055	0.38	11.6	3.6	2	21	162	181	161	182	0.93
2	27	7.9	5.5e+02	1.6	0.6	3	23	190	210	189	210	0.83
3	27	0.065	4.6	8.2	1.9	1	23	215	238	215	238	0.95
4	27	0.0042	0.29	12.0	2.1	2	23	244	265	243	265	0.95
5	27	0.18	13	6.8	2.7	2	21	269	288	268	289	0.93
6	27	0.0017	0.12	13.2	0.4	2	23	333	355	332	355	0.95
7	27	0.0028	0.19	12.5	1.4	1	23	388	410	388	410	0.98
8	27	0.0051	0.35	11.7	0.8	1	23	416	439	416	439	0.97
9	27	0.014	0.97	10.3	0.5	1	23	448	471	448	471	0.88
10	27	0.081	5.6	7.9	5.7	1	23	480	502	480	502	0.98
11	27	0.00011	0.0076	16.9	0.5	2	21	626	645	625	646	0.94
12	27	4.2	2.9e+02	2.5	0.1	3	23	652	672	651	672	0.91
13	27	0.15	11	7.0	2.7	1	23	677	700	677	700	0.95
14	27	0.014	0.98	10.3	0.2	2	23	706	727	705	727	0.96
15	27	1.2	84	4.2	2.9	1	20	730	749	730	751	0.92
16	27	0.00088	0.061	14.1	1.4	1	23	763	786	763	786	0.93
17	27	0.0004	0.028	15.2	4.8	1	23	792	814	792	814	0.97
18	27	6.1	4.3e+02	2.0	0.3	1	23	848	871	848	871	0.74
19	27	0.0047	0.33	11.8	0.5	2	21	995	1014	994	1015	0.93
20	27	2.9	2e+02	3.0	0.0	3	23	1022	1043	1021	1043	0.96
21	27	7.7e-05	0.0054	17.4	0.7	2	23	1077	1098	1076	1098	0.97
22	27	1.6	1.1e+02	3.9	1.5	2	21	1102	1121	1102	1122	0.91
23	27	0.00018	0.012	16.3	2.1	1	23	1148	1171	1148	1171	0.96
24	27	6.7e-05	0.0047	17.6	0.4	1	23	1177	1199	1177	1199	0.97
25	27	0.11	7.4	7.5	0.1	1	23	1205	1227	1205	1227	0.97
26	27	0.0013	0.092	13.5	0.4	1	23	1233	1256	1233	1256	0.94
27	27	8e-05	0.0056	17.4	5.7	1	23	1262	1285	1262	1285	0.96

Sequence Information

Coding Sequence: ATGAGCAAACAAGTGGATGTCAAGGCGTTAGTGTCACACGTAGTCCGCGGCGACGGTGTGCAAAGATGTAGAATATGTATGGGAGATACATCCGAAGGGCAAGTTCATTTAGAAGATACGGTGATGATGGACGGAGATAAACCCATCACATTATCAGAATTACTAGAAACAGTCACCGGAGTTCAGGTGGTGCTCGAGGGGGACCTGCCTCCTGGAGTGTGTCCGGCCTGTCTCATGTGTGCTCTGAGTGCTGCAGAGTTCCGATCCCTGTGCCAGCAGGCCGCCAGCCAATGGGAACTGACCGTGGAACTCCTGAATGGCCTCACCTCACAATGTGATGGAGAGAAGACTATATTTGCATTATTAGAAAAAAGCCAAATGATTGTCATCAAAGATAACACTTGCATCAAAACTATGAATATAGTCGACAGATTGAATGAGCACTTGACTGAACCAAAGAAGGCCGAGTCTCCCATATCCTGCTCTTGCCCAAACTGCGGCAAGCAGTTCCAATATGCCCATCAGTTGAGCCACCATTTGAAAGAATCCATGGATATGCAACGGGCTTGTTATATTTGTGCCAAAATCATGTCCCGAAGTGAATTAATCCAACACATGCATCAGGTACATGACAAGGAATCATTTGATTGTAAGAAGTGCCCGGCAGTTCTGTGCTCCTACAGCCAGTACAAGCTACATTTGGCCAAATCACATTTCCATACAGCGTGTATGTGTGTCGAATGTGGACGCAGCTTCCAAACTCAGAACGCGTTCCACGCTCACGTGTCCGTCCACCGACCTCAAACCTGCCCGAGCTGTAACAAGCTGTTCCGCAACCAAACCTGTTACGTTCATCACGTGAAATGGTGCTGCAATCTGGACAAGAATAGAGAGGACACCTTCAAAACCAAGACCAAAGTGACCGTGGAAGTGAAAAACGAAGTCAGCAAGCGGAAGATCAAAGTTGGTCTACGGGGGAGCGCAAACCAGCAGTGCATATGCGACTACTGCGGCAAGAAGTTCGCTGGGAAGAAGTTCGTCGCTGCTCACATCCAGATAGTTCACATGAAGAACACACACCGACCTTGTGTTTATTGCGGCAAGTTGCTGGCGGCGGCACACATGTCGGAGCACGTGAAGTATCACGAGGAGGACAGGTCGTTCACCTGTCAGCATTGCGGCGTGGTGCTTAAAACTAGGCTGGGCTACACGCAGCACATACGCCTGCACACCGGTGAAAGGCCGTACGCCTGCAAATTCTGCGGTCAAACTTTCTCAGCGTCCTCGCGAAGATCGGAACATATACGTAAAGCGCACAAGAGCTCTGACATCGTGTTGAAACACGCCTGTCAATACTGTCCAGCGAGGTTCCGTCTTCCGTACCGACTGAAGAAGCACCTGGTAGCTGTTCACAACAACGAAGACCAAAGCTTGGATTACGAGTGCGCTGAGTGCCACGAAAAGTTCGGATCCTGTCGTGGTCTCTTGCATCACAGCCGGAAACACCAAAACGTGAAATTCCTGCCAAAGAGAAAGGAGAGATGTGTCTTTAAAGTCTTCAGCGATGTGCTGGAGGAATGGGAACTGCCACGAGGGTTGTGCTGCGATTGTTCCGAAACCGCCCTCACAGCATATCAGTTCAGGCAGCTTTGCAAACAGTCCGACAACCATTGGAGGAGGTCCATGGAAGTCATAAACAAAGCCACACTGATACCGCGCGACCATAAAACCTTGTATATATCGTACGCAGACGAAGTTGTATATAAAGATGATGGGATAACGAATTCAGCGATGGCGGCCGCCAGACTTAATGCCATCAGGAAAGGTGCTAACCGGCCGAGATACAAGAAGCACGTGAAAATTAGCGGTGAAACGAAATGCCGCGATTGTGGCAAAAAATTCCCTCTACCATACTACCTGAACAGACATCTGAAAAGCACACCAAAGCGGGCCTGCACTCAGTGTGGCGAGGTGATGCTTAAGGAGAAACTGGCTAGGCATTTGGAAACTATACACCAGATACATGTTTTTTACTGCGACATCTGTCACCAGCTGTTCAATGACTTATGCGGTTTGGGGCGACACAGGGAGGTTTATCACAGAGATAGCGCATTGGAATGCAAGGTGTGCAGGAACGGCTTCACCAGCGACAGATCGCTGGCGGCTCACATGTACTCGCACACATTATTTAACTGCTCGTCCTGCAACAGAGCGTTCGAGAATCGCAAGTGCTATATTTACCATAAAAGCGAATGCACCGGAAGGAAGTCCTACACCCAGAACCTTTATGAATGTCATGATTGTGGTAGCAAATACACCAAGAAACCCTCGCTGAGGATACATATAGTGCAGAAACATCTGAATGTCCTGCCGTTTGTCTGCCAGACTTGCGGGAAGAGGTGTTCCACTAGGAACCATTTGAGGTCTCATGAGCTGGTTCACAAGACCGAGAGACAGGTCTACGAGTGTTACTGCGGTGCAAAAATGCGATCGGCTCTCGGCTTTGAGATGCACCAGAGGATTCATTCGGGGGAGAAGCGATATGTTTGCGAGGAGTGTGGAGACAGGTTCCTCTCGGCCTCGAGGAGGTTGGACCACGTCAAGAGGAAGCACAGATCTAAAGAGTTAGCCCACGGCTGCGACAAATGCGATGCCAAATTCCTGAGAGAGGAGCTTTACGTACCCAAGGGTATCTGCATCGGGTGCTCCAGTGTGGCGATCTCGGCCTTCGAGTTCCGGATATTCACCAGGAACTCGGTCAGTCTGTGGAGGAACTGCATCAACACCATAGACACGTTGCCGAAAATGTCATGCAATAAGTCCGTATACGCCATCCTGAGGGGAAATATGTCGCTGCAGGCGGTGAACAGCTTCAACGGCGGGAAGACGGAGCTGGTGGAACATCTCTCGAACCGTCTGACCAAGAAGAAACCTTTAGTAGTGGAGAAGAAGCCGAGACATCCCAGAACGGGGCCGGCCTGCACTTGTGTCGACTGCGGAAAGGCGTTCCTAAGTCCTTACTACTTGAATCTACATTTGCGCAACAGCGGACAGAAGGAGGCCTGCTGGCTGTGCGGGGCCATGGTGGTCAGGGGCAGAGAGATGAAGGAGCATTTGTCAACAATACACAAGACTGATATGATTCTATGTCCGGATTGTCCCACGTTGTTGAAAAGCGAACAGGAATGCAAGAGGCATCTCAAGAAGTGCCACGGCCCGGGGAATTTGACGTGTGCGGACTGCGGCAGGACCTTCCAGAGGCAGACCTCCTTCGAGGTGCACACGCAGATGCACACCGTCAGGACCTGCAGGGCCTGTGGCGCGCAGTTCACCAATCGCGGCTGTTACAGAGAGCACAGATCCAAATGCGAACCGGACGCGAAGCCAGACAGGAAGTCGGTCCCGAGGAGCCGGAGGTCAAACGTCCGCGACCCGGCCACATTCACGTGCGACTACTGCTCGAAGACGTACCACTCGCGGCCGCAGCTGAAGAATCACATAATGTGGATACACATGGACGTGAGGCCGCATCAGTGCCAGTGGTGCGGGAAGAGGTTCTACACGCCGGCGCGTCTGGCCGAGCACATGGTGGTTCATACGAGGGTTAGAAACTTCGAGTGTGACATCTGCGGTGCGAAACTGGTCTCCAAGATGGCGGCCGTGTATCACAGGCGAAGACATACGGGGGAGAGACCCTACGAGTGTCCGGATTGTGGGGAGAGGTTCATATCGTCGTCCAGGAGGTCGGAGCACGCCAAGAGGAGGCACAACAGAGGTCTCAGGTTCCAATGCCCCCACTGTCACGCCTCGTTCGTCAGGAGCCACGAGCTGAAGAAGCACACAGACAAAGTCCACAACACGGACGAGCTGAGAGTTAAGAAAGACAAGAACTGCTTAGAGAAAGTTTGA
Protein Sequence: MSKQVDVKALVSHVVRGDGVQRCRICMGDTSEGQVHLEDTVMMDGDKPITLSELLETVTGVQVVLEGDLPPGVCPACLMCALSAAEFRSLCQQAASQWELTVELLNGLTSQCDGEKTIFALLEKSQMIVIKDNTCIKTMNIVDRLNEHLTEPKKAESPISCSCPNCGKQFQYAHQLSHHLKESMDMQRACYICAKIMSRSELIQHMHQVHDKESFDCKKCPAVLCSYSQYKLHLAKSHFHTACMCVECGRSFQTQNAFHAHVSVHRPQTCPSCNKLFRNQTCYVHHVKWCCNLDKNREDTFKTKTKVTVEVKNEVSKRKIKVGLRGSANQQCICDYCGKKFAGKKFVAAHIQIVHMKNTHRPCVYCGKLLAAAHMSEHVKYHEEDRSFTCQHCGVVLKTRLGYTQHIRLHTGERPYACKFCGQTFSASSRRSEHIRKAHKSSDIVLKHACQYCPARFRLPYRLKKHLVAVHNNEDQSLDYECAECHEKFGSCRGLLHHSRKHQNVKFLPKRKERCVFKVFSDVLEEWELPRGLCCDCSETALTAYQFRQLCKQSDNHWRRSMEVINKATLIPRDHKTLYISYADEVVYKDDGITNSAMAAARLNAIRKGANRPRYKKHVKISGETKCRDCGKKFPLPYYLNRHLKSTPKRACTQCGEVMLKEKLARHLETIHQIHVFYCDICHQLFNDLCGLGRHREVYHRDSALECKVCRNGFTSDRSLAAHMYSHTLFNCSSCNRAFENRKCYIYHKSECTGRKSYTQNLYECHDCGSKYTKKPSLRIHIVQKHLNVLPFVCQTCGKRCSTRNHLRSHELVHKTERQVYECYCGAKMRSALGFEMHQRIHSGEKRYVCEECGDRFLSASRRLDHVKRKHRSKELAHGCDKCDAKFLREELYVPKGICIGCSSVAISAFEFRIFTRNSVSLWRNCINTIDTLPKMSCNKSVYAILRGNMSLQAVNSFNGGKTELVEHLSNRLTKKKPLVVEKKPRHPRTGPACTCVDCGKAFLSPYYLNLHLRNSGQKEACWLCGAMVVRGREMKEHLSTIHKTDMILCPDCPTLLKSEQECKRHLKKCHGPGNLTCADCGRTFQRQTSFEVHTQMHTVRTCRACGAQFTNRGCYREHRSKCEPDAKPDRKSVPRSRRSNVRDPATFTCDYCSKTYHSRPQLKNHIMWIHMDVRPHQCQWCGKRFYTPARLAEHMVVHTRVRNFECDICGAKLVSKMAAVYHRRRHTGERPYECPDCGERFISSSRRSEHAKRRHNRGLRFQCPHCHASFVRSHELKKHTDKVHNTDELRVKKDKNCLEKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00419218; iTF_00420723; iTF_00419927;
90% Identity: iTF_00419927; iTF_00420723; iTF_00419218;
80% Identity: -