Basic Information

Insect: Danaus plexippus
Gene Symbol: Znf296
Assembly: GCA_018135715.1
Location: CM030930.1:5492372-5499799[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 7.9e-05 0.0055 17.4 0.0 2 19 183 200 182 201 0.95

2 11 0.3 21 6.1 0.8 1 23 244 266 244 266 0.95

3 11 0.0046 0.32 11.8 0.8 2 21 367 386 366 387 0.92

4 11 0.00011 0.0078 16.9 0.9 1 23 395 418 395 418 0.97

5 11 1.8e-05 0.0013 19.4 3.1 1 23 436 458 436 458 0.98

6 11 1.6e-06 0.00011 22.7 2.5 1 23 465 487 465 487 0.98

7 11 1.1e-07 7.6e-06 26.4 2.3 3 23 501 521 499 521 0.96

8 11 2.5e-05 0.0018 18.9 3.2 1 23 527 549 527 549 0.99

9 11 4.5e-07 3.1e-05 24.4 1.5 2 23 556 577 555 577 0.96

10 11 4.5e-07 3.2e-05 24.4 1.4 1 23 583 605 583 605 0.99

11 11 0.0093 0.65 10.9 0.4 1 23 611 633 611 633 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	7.9e-05	0.0055	17.4	0.0	2	19	183	200	182	201	0.95
2	11	0.3	21	6.1	0.8	1	23	244	266	244	266	0.95
3	11	0.0046	0.32	11.8	0.8	2	21	367	386	366	387	0.92
4	11	0.00011	0.0078	16.9	0.9	1	23	395	418	395	418	0.97
5	11	1.8e-05	0.0013	19.4	3.1	1	23	436	458	436	458	0.98
6	11	1.6e-06	0.00011	22.7	2.5	1	23	465	487	465	487	0.98
7	11	1.1e-07	7.6e-06	26.4	2.3	3	23	501	521	499	521	0.96
8	11	2.5e-05	0.0018	18.9	3.2	1	23	527	549	527	549	0.99
9	11	4.5e-07	3.1e-05	24.4	1.5	2	23	556	577	555	577	0.96
10	11	4.5e-07	3.2e-05	24.4	1.4	1	23	583	605	583	605	0.99
11	11	0.0093	0.65	10.9	0.4	1	23	611	633	611	633	0.98

Sequence Information

Coding Sequence: ATGATGGCCCACGAAAACGTTGAAATAAAAATTGAATATTTATGTCGTACCTGTTTGGCCAAAGAAATTGATTTAATTTCAGTTTTTGAAGTATGCCTCGGAAATATCTCATTCGATAGTATTATTGCCTCCGTTACTGGTATAAAGATTGAAGTGGGGGATGGTTTACCTTCAACAATATGCAAGGATTGCAAAGACAAGGCAGTTAGTGCTTACAACTTTAGAACACGTTCAGAGGAAGCTAATGTGATGTTATGTGGTTTGTTAAACAAAGAAAAATTTGATCGAAATAAAAATCAACATTCTAACCTCCAGACAAAAGTTGTTGAAGTAAAAACAGAGCAATATAATGAGAGCAGTCATGACAATTATATAGATTTGGATCTCTCCACTGCTCTCAATACTGATCACGAACAGTATAATAATGTGGATGATGTAAAAAATGAAAGTGACATCCGACCTAAGGACATACAAGAAAATAGCACTGTGAATCCTGACACCGATCTCAACAATTTAACGGAAGATGACAATAATAAAGATAGCACATATTGTCCCATATGTGGCACTAGTTTCTCAGATGCTGTGGCCCTCACAAAACATGCTTGGGATAGACACGCTGATCTTATGGGACCCAAAAAACGGGGTCGGCCCAAGAAACTACTGACTAGTACTATTTTAAGCAAATTATCAGAAAATGGTTATAATTTAAAAAGTCTCCCACATCAAAAACACAAATGTGCTTTTTGTAAAGATGATTTTAAGGCTAAAGATGATTTGTTGTTGCATATGGTCGAACACAGGGATGTTAAGTTGTTAAAATGTCTGGTTTGCAAAAAAATTTACCTCACAAAGAAAGATTTTGATGTACACAACTGTGGTCAGGACGGAGAAATAAATAATTTTAAACAAGGAGAGCATCTAGAAACTACAGTTGAGAAATTTAAATTATGTACTGAAATTATGCTTCAAGAGATCTTATTAACAAATTGTGATGCGGATAATCCTAGCAATGTTGAAGTGTGTGAGGCGTGTGGTGGCGTTTTCACTGCCATGGAAATCAGTACACATAGAGATCAGGAACACCCTGAACTGTCTCTGCGGTGTCACATGTGTGAGAAGGTGTTCGCAACCTTGAAGTCAGCGAGCCGGCACCGATCCACGTGTTCGTTGGTGGAGCGTCTTTTCTCGTGTTCTTCTTGCGGCATGAGGTTCGCGCACGAGGTTACTCTCAACAAACACATCCTGAGAGCTCACGCCGGTCAGAGCGTGTCAGTCAGGTTCATGGACAGGGGAGCGCCACCACAATACAAGTGTGACACGTGCAACAGACGGTTTCAGAGGAAAGATCTGCTAACAAGGCATTCTAAGATACATAAAAATTCTGACAAATTTTTTGAATGTGATGTCTGCAAAAAGAAATTTCATAGAAGAGATAATCTAAGAGCCCACGTCCGTATTCACGACGGCACCAGTTCGTCAGCCGGTTCAAGCGCCTGCCTCTGTCTCTACTGCGGCAGAAGTTTCTCAAATTCCTCTAATCTCATAGTTCATATGCGTCGACATACCGGTGAGAAGCCATACAAGTGCGACTTCTGCGGGAAAGGGTTCCCGCGTTCGTCTGACCTCCAGTGTCACCGACGATCTCATACCGGCGAGAAACCTTGCATATGCGGAGTGTGTGGAAAAGCCTTCTCCCGGAGCAATAAGCTGTCGCGTCACATGCGTGTACACACGGGAGTCAAGCCGTACAAGTGTTCTTATTGCGAGAAGGCGTTCTCACAGAGCAACGATCTAACGCTACACGTCCGGCGACACACGGGCGATAAACCTTACGTCTGTGAATTATGTGGGGATCGCTTTATACAGGGTACAGCTCTTCATAATCACCGTCGCGCCCATGGTCACTTCCCGCCATCGACCCAACCGTTGCCTCCTATAGTGTACACCGTTCAGACGATCACGCAGACATAA
Protein Sequence: MMAHENVEIKIEYLCRTCLAKEIDLISVFEVCLGNISFDSIIASVTGIKIEVGDGLPSTICKDCKDKAVSAYNFRTRSEEANVMLCGLLNKEKFDRNKNQHSNLQTKVVEVKTEQYNESSHDNYIDLDLSTALNTDHEQYNNVDDVKNESDIRPKDIQENSTVNPDTDLNNLTEDDNNKDSTYCPICGTSFSDAVALTKHAWDRHADLMGPKKRGRPKKLLTSTILSKLSENGYNLKSLPHQKHKCAFCKDDFKAKDDLLLHMVEHRDVKLLKCLVCKKIYLTKKDFDVHNCGQDGEINNFKQGEHLETTVEKFKLCTEIMLQEILLTNCDADNPSNVEVCEACGGVFTAMEISTHRDQEHPELSLRCHMCEKVFATLKSASRHRSTCSLVERLFSCSSCGMRFAHEVTLNKHILRAHAGQSVSVRFMDRGAPPQYKCDTCNRRFQRKDLLTRHSKIHKNSDKFFECDVCKKKFHRRDNLRAHVRIHDGTSSSAGSSACLCLYCGRSFSNSSNLIVHMRRHTGEKPYKCDFCGKGFPRSSDLQCHRRSHTGEKPCICGVCGKAFSRSNKLSRHMRVHTGVKPYKCSYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQGTALHNHRRAHGHFPPSTQPLPPIVYTVQTITQT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01033934;
90% Identity: iTF_00420716;
80% Identity: -