Dple004014.1
Basic Information
- Insect
- Danaus plexippus
- Gene Symbol
- -
- Assembly
- GCA_018135715.1
- Location
- JAEQBL010000033.1:520644-531324[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.048 3.3 8.6 0.1 1 20 206 225 206 227 0.94 2 19 0.0029 0.2 12.5 0.3 2 22 255 275 254 277 0.89 3 19 1.8 1.2e+02 3.7 3.3 1 23 300 322 300 322 0.97 4 19 0.0013 0.088 13.6 0.8 1 23 326 348 326 348 0.98 5 19 0.013 0.89 10.4 1.2 1 23 353 376 353 376 0.92 6 19 0.028 2 9.4 0.4 2 23 384 406 383 406 0.93 7 19 0.00048 0.034 14.9 6.1 1 23 413 435 413 436 0.95 8 19 0.0046 0.32 11.8 1.2 1 23 442 464 442 464 0.95 9 19 1.3e-06 9.2e-05 23.0 2.0 2 23 471 492 470 492 0.96 10 19 4.4e-06 0.00031 21.3 2.2 1 23 498 520 498 520 0.98 11 19 0.035 2.4 9.1 1.3 1 23 614 637 614 637 0.92 12 19 0.88 61 4.6 0.1 2 23 663 685 662 685 0.89 13 19 0.028 2 9.4 5.1 3 23 710 730 708 730 0.96 14 19 0.0008 0.056 14.2 0.6 1 23 734 756 734 756 0.97 15 19 0.071 4.9 8.1 0.2 1 23 763 786 763 786 0.91 16 19 0.0017 0.12 13.2 1.3 2 23 794 816 793 816 0.95 17 19 1.1e-06 7.7e-05 23.2 1.2 2 23 822 844 821 844 0.97 18 19 1.4 96 4.0 1.0 1 23 850 873 850 873 0.89 19 19 2.1e-07 1.4e-05 25.5 1.2 1 23 879 902 879 902 0.98
Sequence Information
- Coding Sequence
- ATGGAGCAAAATATAAGTGACGGTATGTGTCGGTGTTGTGCATCAGAAGGTAGTTTTAAGGACTTTCAAACAACTTACCATTGGATGGGTGAAGAAGAAGTGTATTCAAAAATGTTAAAGGATTGTTTTGATATAACTCTGTCTACATCGGAGGTGATAAGTAATGGTGGTATATGCGAAGTATGTATCACGCAGCTTCGTAACGCGTTGAACTTCAAGCGTCAGGTCCAGGTCACTGAGGAGCAGTTCAAGAAGAAAGTCCACGAGACGGTTTTTAAATCAAACACGATAAAGCTTGAGGTGTCGAGGGGCGACGAGGATTCTGATAATGAAGAGTCAGATAAACTATCAGATTACGAGGTAACTATCAAAGAGGAGAAGGAGGACGAGAAGCCGAAGAAGCGTCAGCCCAAAGCGACGACCTCCAAGACGAAGAAAGCGAAAACGGAAGGGGAACCTTCGAAACGAACGGACGGCGAACCGCCCAAACGCAAGAAAAAGAAAAAGAAATCGGAGGTAAGCGCGACACCTGAGCGCATTGAACACAGGGTCAACCTGACAGCCATATTGCAGTTCTCCAACGCGAGTCCGTTCCGGGATAAGACCATGAAAGGCTTCTCCTGCCTCTACTGCGCTGAGAGTTTTCAGGATATTGACGAACTCAGAGCGCATACGTCCCAGCAGAATGAGAAAGACAAAATTAACACAATGCTTGATTACAAACTTAGCTATAATCCCATCAAACTGGACATAACTAATCTTCAATGCACCGTCTGCCATAAAGATTTAAAGGATCTGAGCGAGCTCAAGGATCATTTAGTAGCTGTTCACAATAAGACCATACATAAGGATATCAAAGACACGATACTGCCATTCAGATTGGAGAACGGTCATAACTTCACTTGCGTCATATGTTCTGTTGTGCACATATCATTCAAGAATTTATATCATCACATGAGCAGCCACTATCGTAACTATTGCTGTAAGAAATGCGGCGCTGGTTACATCACCATAGCGGCGTTGAGGAAGCACGGCAAAACTCACTATCAGGGTCATTTTCCTTGCGACTTCTGTGATAAATCTTACACGTCGCTAACCAAGAAACGGAATCACGAAAAGGGCGTCCACACAGGCGGCTGGCTGAGAAACAAGTGTCCACACTGTCCCGAAATTTTCGTCAGCTATTACGATCGCAGCGAGCACTTGGTTAAGGTCCACAACGAAGCACCGGTTATATATCCTTGCAACGCGTGCAATAAGACATACAAAAAGAAATTCGAATTAAACAGGCACATAAAACACCACCACTTGCAGCAGAGGAGTTTCCTGTGTGATAAATGCAATGCTAAGTTCTTTTCGAAGCGCGGCCTCGTTGATCACATGACACGGCATACGGGTTCGGAGATGTGTTCCTGCGACGTATGCGGTAAGGCCTTCTCCAGGATAAGGACCCTAAGAGAGCATATGCGGACGCACGAAGACGATAAACGCTTCCAATGCGAGGTCTGCAAGAAGACTTTCATGCAGAAGAGCAGTCTCAAGAGCCACGTGAAGCTGCATCAGGACGACTTGGATATATTCAAAGAGTTTGATGACGTCAAGCATTTAATAGACGACAGGGAGATGACTCTAAAACAAATAGCAGCAGAGAACAAGATGAGGTCTATAGGAACCCGAAAAAAACGGAAAACGACCGTAAAGGAGGAAAGCGGGCAGACGTTGAATAGTGTTGTGTTCCGTGAAAAGCATCTACGTGAGATGCAGAAGCAGTGGCACAATCTAACTACCCTCCTTAAATATTCTAACGTTACCCCGTTCAAGGACCGAAACGACGCGGGCTATATATGCGCTTATTGCTTTAAGACCTTCCCAGATCCCAATATTCTAAGACAACACACCCACTATGACCATGTCAAAGAGAAACCGACATACAAAGCCGGTTCTGGCATAAGCAGTTTCGTAGTTTTTTTGGACATAGTCGATTTAAAATGCACGATATGTGGTCTGTCCATGGAGAGTATTAATTTTCTCACCGAGCATCTAGTCAAAGAACACGACAAGAAATATTATTTAGGTGTGACGGACTACTTCCAGCCGTTCATTCTAACTAGCGAGCAGCAAATACACTGCTGCCTGTGTGACGAGGTTTTCCATAATATGAAATTACTGATGCAACACATGAACATGCATTACCGCAATTTCATCTGCACCACTTGCGGTGCTGGCTTCGTGAACAGTTTCCGTCTAAAAAGGCACGAGACGACTCATTTGAAAAAGAAAAGCGGTTTTGCTTGCCGGCATTGCGGGCTGGTATTCGCAGCTGAATCTAAAAAGAAGGCTCACGTGAACGCTGAGCATAAGGGCATAGAAGGGCATAGCGTGTGTCAAATTTGCAAGGCCAGATTTAAGAATTATTATCAGAAAACCCGGCATATGATGCAAGTACATAACGTAGAGGGCATCAAATGTGAAAAGTGTGACAAGCGTTTTAATCTTAAATCTAATCTGATGCTTCATATGCGGAGTGTGCATTTGAAAGAGAGACCATACGAATGTTCGGTATGCAGCATGGGATTCTTTATTAAGCGGCACATGCTAGGACATTATATGGCCACGCATACTAATGAGAGAAAATTTAAATGTGACGTATGCGGCAAGGCGTACGCTACGCAGAATAGCTTAAGGAAGCATATGAAAAAGAATCACGGTATTTCAAAGAGTACAATGTCAGAACAGAATATTGTTAAGTGA
- Protein Sequence
- MEQNISDGMCRCCASEGSFKDFQTTYHWMGEEEVYSKMLKDCFDITLSTSEVISNGGICEVCITQLRNALNFKRQVQVTEEQFKKKVHETVFKSNTIKLEVSRGDEDSDNEESDKLSDYEVTIKEEKEDEKPKKRQPKATTSKTKKAKTEGEPSKRTDGEPPKRKKKKKKSEVSATPERIEHRVNLTAILQFSNASPFRDKTMKGFSCLYCAESFQDIDELRAHTSQQNEKDKINTMLDYKLSYNPIKLDITNLQCTVCHKDLKDLSELKDHLVAVHNKTIHKDIKDTILPFRLENGHNFTCVICSVVHISFKNLYHHMSSHYRNYCCKKCGAGYITIAALRKHGKTHYQGHFPCDFCDKSYTSLTKKRNHEKGVHTGGWLRNKCPHCPEIFVSYYDRSEHLVKVHNEAPVIYPCNACNKTYKKKFELNRHIKHHHLQQRSFLCDKCNAKFFSKRGLVDHMTRHTGSEMCSCDVCGKAFSRIRTLREHMRTHEDDKRFQCEVCKKTFMQKSSLKSHVKLHQDDLDIFKEFDDVKHLIDDREMTLKQIAAENKMRSIGTRKKRKTTVKEESGQTLNSVVFREKHLREMQKQWHNLTTLLKYSNVTPFKDRNDAGYICAYCFKTFPDPNILRQHTHYDHVKEKPTYKAGSGISSFVVFLDIVDLKCTICGLSMESINFLTEHLVKEHDKKYYLGVTDYFQPFILTSEQQIHCCLCDEVFHNMKLLMQHMNMHYRNFICTTCGAGFVNSFRLKRHETTHLKKKSGFACRHCGLVFAAESKKKAHVNAEHKGIEGHSVCQICKARFKNYYQKTRHMMQVHNVEGIKCEKCDKRFNLKSNLMLHMRSVHLKERPYECSVCSMGFFIKRHMLGHYMATHTNERKFKCDVCGKAYATQNSLRKHMKKNHGISKSTMSEQNIVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00959575;
- 90% Identity
- -
- 80% Identity
- -