Basic Information

Insect: Danaus plexippus
Gene Symbol: -
Assembly: GCA_018135715.1
Location: CM030913.1:7269652-7281487[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 7.3e-05 0.0051 17.5 2.2 1 23 382 404 382 404 0.97

2 20 0.014 0.95 10.3 1.3 1 20 410 429 410 432 0.93

3 20 2e-05 0.0014 19.3 5.4 1 23 466 488 466 488 0.98

4 20 0.00017 0.012 16.3 4.7 1 23 494 516 494 516 0.99

5 20 3.2e-05 0.0022 18.6 5.3 1 23 522 544 522 544 0.97

6 20 1e-05 0.00072 20.2 7.3 1 23 550 572 550 572 0.97

7 20 6.8e-07 4.7e-05 23.9 2.9 1 23 578 600 578 600 0.97

8 20 9.3e-05 0.0065 17.2 6.7 1 23 606 628 606 628 0.97

9 20 4.1e-05 0.0028 18.3 5.4 1 23 634 656 634 656 0.98

10 20 4.5e-07 3.1e-05 24.5 1.9 1 23 662 684 662 684 0.98

11 20 4.5e-05 0.0032 18.1 7.9 1 23 690 712 690 712 0.98

12 20 0.00016 0.011 16.4 6.6 1 23 718 740 718 740 0.95

13 20 6.9e-06 0.00048 20.7 4.3 1 23 746 768 746 768 0.98

14 20 1.8e-05 0.0012 19.4 6.4 1 23 774 796 774 796 0.97

15 20 0.00024 0.016 15.9 6.3 1 23 802 824 802 824 0.97

16 20 2.8e-06 0.00019 22.0 6.0 1 23 830 852 830 852 0.98

17 20 5.2e-05 0.0036 18.0 7.8 1 23 858 880 858 880 0.97

18 20 2.4e-06 0.00016 22.2 4.1 1 23 886 908 886 908 0.96

19 20 0.0005 0.035 14.9 0.3 1 23 915 937 915 937 0.96

20 20 0.052 3.6 8.5 5.6 1 23 947 969 947 969 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	7.3e-05	0.0051	17.5	2.2	1	23	382	404	382	404	0.97
2	20	0.014	0.95	10.3	1.3	1	20	410	429	410	432	0.93
3	20	2e-05	0.0014	19.3	5.4	1	23	466	488	466	488	0.98
4	20	0.00017	0.012	16.3	4.7	1	23	494	516	494	516	0.99
5	20	3.2e-05	0.0022	18.6	5.3	1	23	522	544	522	544	0.97
6	20	1e-05	0.00072	20.2	7.3	1	23	550	572	550	572	0.97
7	20	6.8e-07	4.7e-05	23.9	2.9	1	23	578	600	578	600	0.97
8	20	9.3e-05	0.0065	17.2	6.7	1	23	606	628	606	628	0.97
9	20	4.1e-05	0.0028	18.3	5.4	1	23	634	656	634	656	0.98
10	20	4.5e-07	3.1e-05	24.5	1.9	1	23	662	684	662	684	0.98
11	20	4.5e-05	0.0032	18.1	7.9	1	23	690	712	690	712	0.98
12	20	0.00016	0.011	16.4	6.6	1	23	718	740	718	740	0.95
13	20	6.9e-06	0.00048	20.7	4.3	1	23	746	768	746	768	0.98
14	20	1.8e-05	0.0012	19.4	6.4	1	23	774	796	774	796	0.97
15	20	0.00024	0.016	15.9	6.3	1	23	802	824	802	824	0.97
16	20	2.8e-06	0.00019	22.0	6.0	1	23	830	852	830	852	0.98
17	20	5.2e-05	0.0036	18.0	7.8	1	23	858	880	858	880	0.97
18	20	2.4e-06	0.00016	22.2	4.1	1	23	886	908	886	908	0.96
19	20	0.0005	0.035	14.9	0.3	1	23	915	937	915	937	0.96
20	20	0.052	3.6	8.5	5.6	1	23	947	969	947	969	0.99

Sequence Information

Coding Sequence: ATGAATCAGGATCACCACAATATAAACACGGGTGGTGGCCAGCCACCAGGCAATTCTGAGCCTCAAACTCAGAGAGTTCAATCATCGCAGCAGCAACAGCAGCAGCAAACACAAAATAACAGTTTAACTCCCACAACATCTGCCACTGATTTACGGGTCAATTCGGCGGCAGTAAACGTTGCTTTGTCAAGCGTAGCTAAATATTGGGTGTTTACTAATTTGTTTCCGGGTCCAATACCTCAGGTGTCAGTGTATGGCGTGCCCACTGGTGCAAGAATTGAAAATGGAAAACCTGTACAGGATCTAGGTCAAGCGCATGCTAGTATCTTGAATGGTGATCCTAGTATTATACTAGGTCATGCAGGACAACCCCAGGTCACAGTATCAGCTGCGGGACAACAGATTCCTGTCTCCCAGATAATCGCAACTCAATCAACACAAGGACATGATTCGCTGGTCGGTCACGGGTCGGGTGAATCGGGCGGTTCGCTGGCAACACCCTCGCAGGTACCCAATCGGGTCGAGTTTGTACAACATAACGTTGACATGATCCAGCTCACTGTGAGCGAGGATGGGATAGTAACAGTGGTGGAGCCGGGCGGAAACAAGTTGGTTGACAAAGAAGAACTACACGAGACTATAAAGATGCCCACAGATCATACACTCACTGTACACCAACTGCAACAGATTGTTGGACATCATCAGGTGTTAGACAGCGTGGTTCGCATCGAGCAGGCCACGGGCGAGCCGGCGAACATACTTGTGACTCAAAATCCCGACGGTACCACCTCCATAGAAACTAGCGCCGCAGACCCGTTGACGGTCAAGGATGAAAAAGGAACTAAAATGGAGACCGCACAGTTCGCCATACCAGCCGAAATCAAAGACATCAAGGGCATTGACCTTAAGAGTGCGATGGGTATGGAAGGCGCTGTGGTAAAGATATCAACTGGCTCCGAACAACACGATCTACACACCATGTATAAAGTTAATGTCGAAGATTTATCACAGTTGTTAGCCTATCATGAGGTCTTTGGAAAATTAAACACTGAGGGACAACCCCAAGCTAAGGTGATAAACGAAGTGGAAGTTGAGGCCGGAACTAGCGCTGCCATGTCGGAAGCGGAGTCATCTCCCGGCCATCATTCTTGTGATATATGCGGGAAAATATTCCAGTTCAGATATCAACTTATAGTACACAGACGGTACCATGGCGAAAACAAACCACATACATGTCAAGTGTGCGGGTCCGCTTTCGCTAATCCAGTTGAACTGTCCAAACATGGGAAATGTCATTTGGTCGGCCGTATGTTTATTTGTGATTCTAATACATTTGTGTATACAGCGGGAGATCCGACCGAGCGCCAGGCCAAACGTCTTGCTCAGGACAAACCGTATGCTTGTTCTACTTGCCACAAGACGTTCTCGCGTAAGGAACACCTCGATAACCACGTGCGAAGTCACACTGGAGAAACACCCTATAGATGTCAGTTCTGCGCCAAGACGTTCACTCGCAAGGAGCACATGGTGAACCACGTCCGTAAACACACGGGCGAGACTCCGCACCGCTGTGAGATCTGCAAGAAGAGCTTCACGAGGAAGGAGCACTTCATGAACCACGTCATGTGGCATACCGGTGAAACACCGCACCATTGTCAAATATGCGGCAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGAGATCCCATACAAACGATACTCCCTTCAGATGCGATCTGTGCGGCAAATCATTCACCAGAAAGGAACACTTCACCAATCATATATTGTGGCACACTGGTGAGACTCCCCACCGCTGCGACTTCTGTTCGAAGACTTTTACCCGTAAGGAGCATCTTTTAAACCACGTGCGACAACACACGGGCGAGTCTCCGCACCGCTGTAACTACTGCGCCAAGTCATTCACACGGCGAGAACATCTCGTGAACCACGTGAGGCAACATACTGGCGAGACGCCATTCCAGTGTGGATACTGCCCTAAGGCTTTCACTAGAAAGGATCATCTTGTAAACCACGTCCGGCAGCATACTGGGGAGTCTCCACATAAATGTTCCTTCTGCACGAAGTCTTTTACTCGCAAGGAACATTTGACCAACCACGTGCGTCAACACACAGGAGAATCTCCGCATCGGTGTATTTATTGCTCCAAATCTTTCACTAGAAAAGAACATTTAACTAATCACATTAGACAACATACGGGCGAGACTCCTCACAAGTGCACGTACTGTCCGCGTGCGTTCGCGAGGAAGGAACACCTCAACCAGCACGTGAGGCAGCACGTGGGCGACTCCCCGCACACCTGCTCCTACTGCCAGAAGACCTTCTCCAGGAAGGAACATCTAGTAACTCACGTCCGACAACACACGGGTGAGACTCCATTCAAATGCACCTTCTGCGCCAAATCGTTCAGTCGAAAAGAGCATCTAACGAATCACGTTCATCTTCATACCGGCGAAACGCCGCACAAATGCCCCTTCTGTACCAAGACGTTCTCGAGGAAGGAACACTTGACTAATCATGTTAGGATCCACACAGGAGAATCTCCACATCGATGTGAATTCTGTCAGAAGACATTTACCCGTAAGGAGCATTTGACGAACCATCTAAAGCAACACACCGGCGACACGCCGCACGCCTGCAAAGTGTGCTCCAAACCATTCACTAGAAAAGAACATCTCATTACTCACATGAGGTCTCACAGCTGTGGCGAGCGACCATATAGTTGTGGCGAATGCGGCAAATCCTTCCCTCTGAAGGGCAACCTATTATTCCATGAGCGATCTCACAACAAAAACAACGCAGCTAACAAGCCGTTCCGATGTGATGTGTGCTCCAAAGAGTTTATGTGCAAAGGTCATCTAGTAACACATAAGAGAACTCACACGGACACTGAAACACCGGCCGCTGAAACGGCTCCAGAAGATGATTGCGGAGATTTCACAAAATGCGAAAAAGACGCTGATAGACCTGAACGAAAGCACGACATTAGGACAACAACAGAAAATAGACCAGCGGAAACGAATGTCACAAGCAATCAGCCAACAAATACAGCAGTGATGCAAATAACTAGCCAGGAAGTTAGAACGTGCCCCACAACAAGCACGCCATCTGTTGCCGGTACATACACACATACAAATACCCATCACAGTGGAACGATAACACACCATCCAGTGTCCGTGAATTACTAG
Protein Sequence: MNQDHHNINTGGGQPPGNSEPQTQRVQSSQQQQQQQTQNNSLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGVPTGARIENGKPVQDLGQAHASILNGDPSIILGHAGQPQVTVSAAGQQIPVSQIIATQSTQGHDSLVGHGSGESGGSLATPSQVPNRVEFVQHNVDMIQLTVSEDGIVTVVEPGGNKLVDKEELHETIKMPTDHTLTVHQLQQIVGHHQVLDSVVRIEQATGEPANILVTQNPDGTTSIETSAADPLTVKDEKGTKMETAQFAIPAEIKDIKGIDLKSAMGMEGAVVKISTGSEQHDLHTMYKVNVEDLSQLLAYHEVFGKLNTEGQPQAKVINEVEVEAGTSAAMSEAESSPGHHSCDICGKIFQFRYQLIVHRRYHGENKPHTCQVCGSAFANPVELSKHGKCHLVGRMFICDSNTFVYTAGDPTERQAKRLAQDKPYACSTCHKTFSRKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDTPFRCDLCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCAKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCIYCSKSFTRKEHLTNHIRQHTGETPHKCTYCPRAFARKEHLNQHVRQHVGDSPHTCSYCQKTFSRKEHLVTHVRQHTGETPFKCTFCAKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLKQHTGDTPHACKVCSKPFTRKEHLITHMRSHSCGERPYSCGECGKSFPLKGNLLFHERSHNKNNAANKPFRCDVCSKEFMCKGHLVTHKRTHTDTETPAAETAPEDDCGDFTKCEKDADRPERKHDIRTTTENRPAETNVTSNQPTNTAVMQITSQEVRTCPTTSTPSVAGTYTHTNTHHSGTITHHPVSVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00247403;
90% Identity: iTF_00419902;
80% Identity: -