Basic Information

Gene Symbol
Ncor2
Assembly
GCA_018135715.1
Location
CM030930.1:11204785-11240038[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.5e-09 1.1e-05 25.7 0.0 1 43 416 458 416 460 0.97
2 2 1.5e-06 0.0019 18.6 0.0 5 46 857 897 857 897 0.96

Sequence Information

Coding Sequence
ATGGTGTGGTCGGCGCCTTCGGGGGAAGTCCTAATAGACATCGTTTCAAGGCCCGGACAGACAGAGCACGGGCACGGGGCACTGGCGTACGGCGGGAAGCAGGCGGGCGTGGCGCCGGCGCGTCCCGCCGCGCCCTACGCGCCGCCCTACCCGCCCGCTCAGCTCCGGGTGCACCAGCCCGGATATGGATCCGCCGCTTTATCATACAGAGACAGTTACAGCCGCGGCGGCGGCGGCGCGGTGGGAGAGTACCGCGCGGGCGCGCGCATGTCGCTCCTGGGGTCTGCGTACCTGCCGCCGCCCGCGCCCGCCCACCATCCGGACCCGCCGCCCTTCAAGAAGATCAGGCTGTCGGCTGAGCGACCCGCCACGCACCAGCCGCTCCGGGTCGACACCAGGGAGCCAGTAATGAACACGTACAACAACAGCGTGGAGGTTCTGTCTCCCAACCCTCCCTCCGAGCCCACCGTCGAAGACCAGAGCTTCCGCACCACCAAGGATGATCTGCTGCAGCAAATATCGAAGGTGGACAGGGAAATGGCGCTATCGGAGCAGACGCTGTTGAAACTAAAGAAGAAGCAGGAGGAACTGGAACAGAGCGCCAGCAAACCGGCCCGCGCCGAGGAGCCCGAGGAGGCGCCGCCCAGGCACAGGAGCCTGGCACAGTGCATCTACGCTGATAATAGGAAGAGGGCCGCATCAGCGCACGCTGTGCTCTCTCACCTGGGTCCGTCCGTGAGTTACCCGCTGTATAACCAGCCTCAGGACACACAGGTCTATCACGACAATATAAGAAGACACCGCTCCTTCAGGAAACGACTCGCAGACCATCTCAGGAAGATCAGGCTCGAGACAGAGAAGCGTGAAGATGCTCTGACAGAAGAATACAGTCGACGAGCTGCAGACTGGCTGAGGAGAGTGGAGCGGCTGGAGATGGGACAGAAGAGAAAGGCCAAGGACGCCAGGAACAGAGAATTCTTTGAAAAGGTGTTTCCGGAGCTCCGTAAACAGCGCGAAGAACGTGAGAGATTCAACCGGCTCGGGGCCCGAGTGAAGTCTGAAGCAGAGTTGGAGGAGATCGCTGATGGGCTCCATGAACAGGAACACGAAGACAAGAAGATGCGATCCTTGACGGTCGTACCACCGCTGTTGAGAACACGCGACCATCATCACCACCACCACCACCATCTCGACACCAACAAGCGCTGTATGGACATGGAAGCTGAACATAAAGGTCTCCAGCTACGGAATGTATGGACTCAGGCTGAGAGAGAACTGTTCCGGGAGAAGTACCTGCAGCACCCCAAGAACTTCGGACAGATAGCATCCTTTCTGCCAAGGAAGAGCGTTCGTGATTGTGTCAGGTTCTACTACTTGTCAAAGAAGGCCGAGAACTACAAACAGTTACTCCGCAAGCCTCGTCCTCGTCGTCACGCCCGCCCGAGACCTGCACCAGAGCCCGAGCTGCCGGCTGGTGTCACCACACGCTTGCAACGAAGTCAAGGATCTCGTGGCGCTGAGAAGGAGTCGTGCCTGGAGGAGATGGCCGAGCCCGTCAATTGCATCCCCGTGCCGCCCGCCGCCCCCGCGACCGCCAGGGCTGAGATGGCGAGGACACCTCCTCTGCCCCCGTCCCCTCCCCCGGCCTCGTCCGCTCCTCCAGCTCCCGTCACCAACAACACCAGCAGCTCGAACCCCGCGGGCGTCACCTGTTCGAGTTCGGTCAGCTCTAGCTCGAGCTCATGCATCACAAGCTCGAGCACTATCACTGTGACCAGCCCGCAAAGCACCAGCGGTGTGAGTGTGGCCACCGTGAGCGTGTCGAGTACTGTGACCGTTGCGAGCAACGTGTCCGTCAGCGGGACGCCCAGCCCGGCCAGTCAGCCCAGCTCTAGTCAGCCGTCCACGGAGACGCCACCAGCTCAGCCCGCGCAGCCTGAACTACCGACGGCCACTGTCACCACCAGCACCACTACAGTCATTACTACGACGGCGGTGTCGAGCGGCGCTTCCGTCAGCTGTGCCACCGGTGTGATGGTGAGCGGAGTGACCCTCACCGTGGTGAGTGGACCGCCAGGAGGGAGCAGCGCCCCCACCATCACACAGACGACATCCTCGGCTACATCCACCGCCACCGACACAGCGGCATCGGAGGCCAACAGCACGCCTTCTTCTACCATCGCGAGCACCACTGCCACCCTGACGCCTGTAAGCAGTACATGCACGGTATGCTCGGTGGCGGCGGCAACCAGGGCGGTGGCCCCGTCACAGGCATCTCAATACGGCTTGGACCCGTCCGTTGTGGGGGCCCGGGTGTGCGAGGGTTGTCACTGCCGATGTGTGAGAGCCCGCCGGAGTAGGTGCACGGTGCCATCCTGTGCTGGACCGAGAGTCAAACGGCTACGTCACCTGCCGCCACGCTGGCACGATCTCCCGCAAGATCTAAAGAGACCGATCATGGATGAATTCCAGATACCGAGCGACCTCAGCAAGTGCTGCCTGACCTGTTTCAAAAGGATAACACGTCGTTTGGACACGATTGGAGAAGGTGGATCTGCCCCGGAACCGACCGAGGATGAAGCGGCAAGGTTCAGAGCTCTTCTCAGGGAGCACGGCACGGCCTGGGAGAGGATGGCCACCGCCAGCGGTAGGACGCCGGCCAGCCTGAAGGCCTTCTACTTCACTTACAGGAAGAAACTGCAACTCGATACTTTGATAAGTGAGAGGAATCCGACCAGAGGCAGCGACACGGACGACAGTATCCTTAGTTCGGGAGACACGGACACCGCGAGTGCGGAGTCTCCGCGACCCCCGCCGCTCCCGGGTCCGCGGACTGATGCCGTGGCGCCCCGGAGACACAGGAGGGACGAATATGATTCATCCGCCACCGAGACGGCCGACGAGGAAAACGATGCACCCAGTACTAAGACTGTGAACGCAGTATCAGTAACCACGGGGGTGACGACGGTGCCGCCGGGGGTGACGGTGACAGGAGTATCGGGCACTACGAGCGGGGCGGGGGTCACCGGGGTCAGCGGGGTCTCCGCGGCAGGAGCGGGTAGTAACGGCTCCGGGCCTCTGACGGTTCGCGACGTGGTTCTCAACATGATCGAGGTCAGCCTCATGAAGAACTCCCGCCCGCCTCCGCTGCCGCACACACATTCTATGCACCAGGCGCCCAAGGTGTCTTCGGGCCACGAGTCCCTGGCCACTCTGACAGTAGTGAGCGGTGCTGGACACGAGCACTCCCCGCGGTCTCCACAGCGTGCCACTATCACGCCGCTAGCGGACAAGGACCTCATGGTTCTTCACATAGAACCACGCGCGCCTGAGTCGCTGCTCGACCTCAGCGTCAAGAGACCACGCCACGATCCGCCGAAGCCGCAACAAGCTCACCGGAACACTGAATACTCGCCGTACCGAGCCCAGGAGCGTGAATCTCCGACGCAGTACAATTCCAAACCGAAGCCGGTCGCATCCCCCAGACAGACTCTCAAGTTGCCAACCAATCCGAAAGGTTCTATCACACTGGGAACCCCAGTCGAGTCACGTTTCGAGACGCAGCGTATGCAGTCTGACCCCAAGACTGGTTCCATAACTGCCGGGACCCCGGTCCATGCGCCACACCATCTTCCGGAGAAGAGGAACTTCGATTACTACAAGAGGAGGAGCCCAGGGGGAGCATACGCATACTCGGCCGCCCCCAATCAGCCTCGGCCGCAGTCACCGTCGTTCTCAAACCAGCCGAGTACGGGCGCAGTGTCTCGAGGTCCATACGGTCACGAGCGGCGGCAGATCATGCTGACGGACTTTATCACGTCGCAGCAGATGCACGGTGGAGCCAGACGCAGCGAGCAGCCCCATGCTCAGCACGGACAGCACGCGCAGCACGCGCAGCATGGACAACTCGTCCATCGCCGGGACAGGGATAGCGTGTCCGTCATACAGAGACATACACACACGTACTCGCATCCGCCGCCCGGTCACGAGGCGTTCACGTCTCTAGTGAACGCGGCGTCAGCGGCTCCCGCCCTCCCCGTCCCCCGGAGGGAGGAACCTGCGTCGCCGCCCGTACACCACCAACCGCACCTCCAGCACCACCAGCACCAGCAGCATCATCAACAACACGAACAGATCCGGGGACCCCGGGAATTTGCTATGGCGCAAAAATACGCACAGTACTCAACGGATAGACGAGCTCCGCCTAGAGACAGTCGGGAGCGCATGGTGCCTATCCAAGAACGCCATTACGTGATCGAACAGCATAATCCACACAACCCTCACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGATGATTGACAGACACCACTTAAACCATGGCCAGCAGAACGTATCCTCGAGCGAGGAGCGTCGGTCGAGTAGTGGCAATTATAATACGACTAACAAGAGGCAGATACATCCCATGGAACGGAAAGAATGTCGGCCAACTGTGAGTGTTACAAGCGTCCCCATAATGAGCACGGTCGTCAGCACACCCACCAGCGTATGCGTGAGTTCTGGCGTTGGCGCCGGTGTCGGCGTGAGTGCGGGTGTGGGCACAGGCGGGGCCTCAGCGGACCGCGCACGGCCCGGAGACGGCACGCTCACGGCCGCCTCGCTCATCAACGCCATTATCACGCATCAGATAAACCAATCCAGTGATCAACGGTTTCCACCCAAGATAATACGTGAAAATGAAACTTCTCAGCAGCCAGAGCTCCCGAGAGACCTGCCAAGAGACATGCCCCGTGAGCTGCCTCGCGAACTGTCCCGGGACATGCCTCGGGACGGAGAGAGGGAGGAGCCGCCGGGACACACCACTAGCATCAAACTCGGCGATCTCGCGTCCAACATCATAGTCAGAGACTTCAGCAGCCCGAACACCACTTCACTCATGCACCATAATACCAATAATCGTTTTGCCGTGTCGAGTGCCGACTCGTACACCAGCGGCGGAGCTGGTGGAGGAGCGGCCGCCGGTGGAGGACAAGCAGAGGAGTGGAGGAGGGAGGCTCCCAAACACGCTCCATATCTGGAGCCAGTGTCGCCTCCAGACAATCATCACTCAGGTCGTAGCTCGGCCGGTGGCGGAACTGGCGCCGGCGCAGGCGGTCGTCGGTACAGCGCAGTCGGCGTGGGCGTGGGTGGTGGAGTTCTCACGGCCTACGACTACGTGAAGACTCGCATCGTGGAGGTGATGCGGAGTGACTCGGACGAGCGCGCCAAGCCGCTCACCTTCCCCACGGCCTACGCGTACCCGTACTCGGCTCTGAACGTCGCGACGCCCACGGCTCCTCCGCCGGCCCAGGCCTCGGCTCAGTTGGACCCGCCGGCCGTGGCAGTGTCCGTGGGCGGCGGGCAGCCCGAGCCGGCTCCGCTCATGTCTGCTCAGTACGAGCCGTTGTCGGACGAGGACTGA
Protein Sequence
MVWSAPSGEVLIDIVSRPGQTEHGHGALAYGGKQAGVAPARPAAPYAPPYPPAQLRVHQPGYGSAALSYRDSYSRGGGGAVGEYRAGARMSLLGSAYLPPPAPAHHPDPPPFKKIRLSAERPATHQPLRVDTREPVMNTYNNSVEVLSPNPPSEPTVEDQSFRTTKDDLLQQISKVDREMALSEQTLLKLKKKQEELEQSASKPARAEEPEEAPPRHRSLAQCIYADNRKRAASAHAVLSHLGPSVSYPLYNQPQDTQVYHDNIRRHRSFRKRLADHLRKIRLETEKREDALTEEYSRRAADWLRRVERLEMGQKRKAKDARNREFFEKVFPELRKQREERERFNRLGARVKSEAELEEIADGLHEQEHEDKKMRSLTVVPPLLRTRDHHHHHHHHLDTNKRCMDMEAEHKGLQLRNVWTQAERELFREKYLQHPKNFGQIASFLPRKSVRDCVRFYYLSKKAENYKQLLRKPRPRRHARPRPAPEPELPAGVTTRLQRSQGSRGAEKESCLEEMAEPVNCIPVPPAAPATARAEMARTPPLPPSPPPASSAPPAPVTNNTSSSNPAGVTCSSSVSSSSSSCITSSSTITVTSPQSTSGVSVATVSVSSTVTVASNVSVSGTPSPASQPSSSQPSTETPPAQPAQPELPTATVTTSTTTVITTTAVSSGASVSCATGVMVSGVTLTVVSGPPGGSSAPTITQTTSSATSTATDTAASEANSTPSSTIASTTATLTPVSSTCTVCSVAAATRAVAPSQASQYGLDPSVVGARVCEGCHCRCVRARRSRCTVPSCAGPRVKRLRHLPPRWHDLPQDLKRPIMDEFQIPSDLSKCCLTCFKRITRRLDTIGEGGSAPEPTEDEAARFRALLREHGTAWERMATASGRTPASLKAFYFTYRKKLQLDTLISERNPTRGSDTDDSILSSGDTDTASAESPRPPPLPGPRTDAVAPRRHRRDEYDSSATETADEENDAPSTKTVNAVSVTTGVTTVPPGVTVTGVSGTTSGAGVTGVSGVSAAGAGSNGSGPLTVRDVVLNMIEVSLMKNSRPPPLPHTHSMHQAPKVSSGHESLATLTVVSGAGHEHSPRSPQRATITPLADKDLMVLHIEPRAPESLLDLSVKRPRHDPPKPQQAHRNTEYSPYRAQERESPTQYNSKPKPVASPRQTLKLPTNPKGSITLGTPVESRFETQRMQSDPKTGSITAGTPVHAPHHLPEKRNFDYYKRRSPGGAYAYSAAPNQPRPQSPSFSNQPSTGAVSRGPYGHERRQIMLTDFITSQQMHGGARRSEQPHAQHGQHAQHAQHGQLVHRRDRDSVSVIQRHTHTYSHPPPGHEAFTSLVNAASAAPALPVPRREEPASPPVHHQPHLQHHQHQQHHQQHEQIRGPREFAMAQKYAQYSTDRRAPPRDSRERMVPIQERHYVIEQHNPHNPHXXXXXXXXXXXXXXXXXXXXXMMIDRHHLNHGQQNVSSSEERRSSSGNYNTTNKRQIHPMERKECRPTVSVTSVPIMSTVVSTPTSVCVSSGVGAGVGVSAGVGTGGASADRARPGDGTLTAASLINAIITHQINQSSDQRFPPKIIRENETSQQPELPRDLPRDMPRELPRELSRDMPRDGEREEPPGHTTSIKLGDLASNIIVRDFSSPNTTSLMHHNTNNRFAVSSADSYTSGGAGGGAAAGGGQAEEWRREAPKHAPYLEPVSPPDNHHSGRSSAGGGTGAGAGGRRYSAVGVGVGGGVLTAYDYVKTRIVEVMRSDSDERAKPLTFPTAYAYPYSALNVATPTAPPPAQASAQLDPPAVAVSVGGGQPEPAPLMSAQYEPLSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-