Basic Information

Gene Symbol
CDC5L
Assembly
GCA_018135715.1
Location
CM030914.1:5329490-5338221[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.5e-17 4.6e-14 52.5 1.8 2 46 9 54 8 54 0.97
2 2 4.1e-12 5.3e-09 36.3 0.1 1 45 60 103 60 104 0.93

Sequence Information

Coding Sequence
ATGCCGCGTATTATGATAAAAGGTGGCGTTTGGCGCAACACCGAGGATGAAATTCTTAAAGCGGCGGTTATGAAATATGGGAAAAACCAATGGTCACGAATTGCTTCTTTGCTCCATCGTAAATCTGCTAAACAGTGTAAAGCTCGTTGGTATGAATGGCTGGATCCCAGCATCAAGAAGACTGAGTGGTCTCGGGAGGAAGATGAGAAGCTCTTGCACCTGGCCAAGTTGATGCCAACACAATGGAGGACCATTGCTCCCATTATTGGTCGCACTGCAGCACAGTGTCTTGAACGATATGAATATCTACTTGATCAAGCTCAAAAAAAGGAAGAAGGTGAAGATGTTGGTGATGATCCGAGGAAGCTCAAGCCGGGTGAAATTGACCCTAACCCAGAAACAAAACCAGCCAGACCTGACCCCAAGGATATGGATGAAGATGAATTGGAAATGCTGTCAGAAGCTAGGGCTCGTCTCGCCAACACTCAGGGTAAAAAGGCAAAGAGAAAGGCTCGTGAGAAACAATTAGAAGAGGCTCGGCGACTTGCAGCCCTACAAAAGAGGAGGGAGTTGAGTGCTGCTGGCATATCTGTGCCTATAAGGCGTAAAAAGAAACGTGGTGTGAATTACAATTCCGAAATTCCATTTGAAAAGAAACCAGCTGCCGGTTTTTATGATACCTCCACGGAGGTCGTTGATCCTATGGCACCGGATTTCTCTAGACTGAGACAGCAACACCTTGATGGGGAGCTACTGTCTGAGAAAGAAGAGAGGGATCGCCGCAAAGACAAACAGAAGCTGAAACAGCGTAAAGAAAACGATGTGCCACAAGCTATGCTGCAGGGTGATCAGCCAGCGAGGAAACGCAGCAAACTAGTGCTGCCTGAACCACAAGTTACTGATCAGGAGTTACAGCAGGTAGTGAAGCTGGGTCGTGCGTCAGAGGAAGCTCGCGGGAGCGCGGTGGAGGGCGGCGCTACGGACGCCCTCCTGGCGACATATGCTCTAACACCTGCACCCGCCACCGCGCTTAGAACACCTGCACCTGCACAGGACAGGATTTTAATGGAGGCACAGAATGTTATGGCCCTGACACATGTAGACACACCCCTGAAGGGTGGACTGAACACTCCTCTGCATGAATCAGATTTCTCCGGAGCACTGCCACAGACACAGGTCGTCGCTACACCCAATGCGGTGCTCTCCACACCATTCAGGTCATCGCGGACGGACGTATCAACGCCAAACAGCTTTGCAACACCTGGCCCTGGAGGGCAAGCGACGATAATGACTCCAGGACTACGTGACAAACTTAGCATAAACCCAGAAGACAGGTTAATAGGAGACACGCCGCAACAAAACAACCAAATACAGAAACAACTGAAGGCATCTGTTCGTAACGCTCTGCAATCCCTTCCCACTCCACGTAACGACTACGAGATCGTAGTCCCCGAGGCGCGGGACGACAACGACACGGAGCGGGGGGACGACCTCGTGGACGATCAGGCTGACGTCGATGACAGGATCCTCAGGGAACAAGAGGAGAAACGTCTAGCAGCCCTAGCGCTTCGGTCCAGCGCTATAAGACGCGGTTGCGCCCGTCCGGCGGAGGTGGTTGGCGGAGCGGGAAGGACAGGTGGCGCCCTCACCTCACTACAGCGGGCCGAGGAACTGCTCAAGGCGGAAATGTTATCTATGCTGCATTATGACGCATTGCACGACCCTCCTCCCGGTGTGGACAAGAAGCGAGCGGTACAGTTACAGGCGTCACACTTGGCGTATCTGGAACAGCATCCTTACGAGCAGTTCACACGCGAGGAGCTGGACGCGGCGGAACAGGAGTTGAACAAGGAGATGGAAGTAGTGAAGGCGGGTATGGGCCATGGAGATCTGGGACTAGAGGCGTACACCACAGTATGGGAGGAATGTCTCGCACAGGTGCTGTTTCTTCCCGGACAAAACCGATACACTCGCGCTAACTTAGCGAGCAAGAAGGATCGACTAGAGTCGGCCGAGAAGAGGTTGGAACAGAACAGGAACCATATGGCGAAAGAAGCTAAGAAATGCTCGAAAATGGAGAAAAAGTTAAGAGTGCTTACAGGTGGTTACCAAAGTCGAACTGCTTCACTAATAAAGCAGTTTCAGGAACTGCAAGATCAAATAGAGCAATCTAATTTAGAATTATCAACATTCAAATTTCTCGCTGAGCAAGAAAAGGCAGCTATACCTAGACGAGTCGAGTCTCTCACTGAAGATGTGAATAGACAAACGGAGAGAGAGAAACAACTCCAGAAGCGCTATGCCGAACTACAAGCAGAGTTGGAAGATATTCACAAGGGACGTCTGAATAAGGAAGGACAAACAAAACAAGTGGAACCAGAACTTTCATAA
Protein Sequence
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGEDVGDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELSAAGISVPIRRKKKRGVNYNSEIPFEKKPAAGFYDTSTEVVDPMAPDFSRLRQQHLDGELLSEKEERDRRKDKQKLKQRKENDVPQAMLQGDQPARKRSKLVLPEPQVTDQELQQVVKLGRASEEARGSAVEGGATDALLATYALTPAPATALRTPAPAQDRILMEAQNVMALTHVDTPLKGGLNTPLHESDFSGALPQTQVVATPNAVLSTPFRSSRTDVSTPNSFATPGPGGQATIMTPGLRDKLSINPEDRLIGDTPQQNNQIQKQLKASVRNALQSLPTPRNDYEIVVPEARDDNDTERGDDLVDDQADVDDRILREQEEKRLAALALRSSAIRRGCARPAEVVGGAGRTGGALTSLQRAEELLKAEMLSMLHYDALHDPPPGVDKKRAVQLQASHLAYLEQHPYEQFTREELDAAEQELNKEMEVVKAGMGHGDLGLEAYTTVWEECLAQVLFLPGQNRYTRANLASKKDRLESAEKRLEQNRNHMAKEAKKCSKMEKKLRVLTGGYQSRTASLIKQFQELQDQIEQSNLELSTFKFLAEQEKAAIPRRVESLTEDVNRQTEREKQLQKRYAELQAELEDIHKGRLNKEGQTKQVEPELS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00461509;
90% Identity
iTF_00420494;
80% Identity
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