Basic Information

Gene Symbol
Xbp1
Assembly
GCA_018135715.1
Location
JAEQBL010000004.1:1362470-1363799[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.6e-17 1.6e-14 53.9 9.5 2 64 44 106 44 107 0.96
2 2 1.8e-05 0.019 15.3 1.5 29 55 85 111 84 117 0.89

Sequence Information

Coding Sequence
ATGAGCGCTCCGATAATCATAACTGTGCCTAATAATTATCTGGCGGTGGACGATGTGGAGTCGAAGGTGGTTCTCGATGTGTCTCCTAGTCCACCGTCCAGGAAAAGGAGGCTGGACCATCTAACATGGGAAGAAAAGATGCAAAGGAAGAAACTCAAGAACAGAGTTGCAGCTCAGACATCGCGGGACCGGAAGAAGGCGAAGATGGATGAAATGGAGGGTCGTATCAAGCACTTCATGGACTTAAACGAGCGGCTTCTTGGTGAGGTGGAGAACTTAAAGGCGATGAACGAGCGGCTTCTGAGTGAGAACTCAGCCCTGCGCGAGGCGGCGAGGAGCGTCGCGGTGGCCCCGAGACCAGCAGAGTCTCATCCTCAGCAGAAGGTGGGGCCCCTGTCGGCACTCAACGCGGCTCGTCTAGTGATGCTGATGAGAAGCTGCCGATCAGCAATAGACATTGTCCTGAAAGAAATGAAGTGGTGGGGTCCACAGCAGAACAATTGGAATCCTGTCAAAGTAGAGACATAG
Protein Sequence
MSAPIIITVPNNYLAVDDVESKVVLDVSPSPPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEGRIKHFMDLNERLLGEVENLKAMNERLLSENSALREAARSVAVAPRPAESHPQQKVGPLSALNAARLVMLMRSCRSAIDIVLKEMKWWGPQQNNWNPVKVET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00420282;
90% Identity
iTF_00418711; iTF_00420282;
80% Identity
-