Dmel020934.1
Basic Information
- Insect
- Danaus melanippus
- Gene Symbol
- pnr_1
- Assembly
- GCA_010014825.1
- Location
- JAAAKD010007556.1:70773374-70775042[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-18 1.8e-14 54.7 4.1 1 35 25 58 25 59 0.97 2 2 2.2e-18 1.7e-14 54.8 6.3 1 34 79 111 79 113 0.98
Sequence Information
- Coding Sequence
- ATGTATGGGACGAGTGGTGACGAGTGGTCGGCCACAGATGGAGTGCTGGAGGCGTACGAGGAGGGTCGCGAGTGTGTGAACTGCGGAGCTAACAACACGCCGCTGTGGCGCCGCGACTCCACCGGCCACTACCTCTGCAACGCGTGCGGTCTCTACCACAAGATCAACGGAGTCAACCGGCCGCTAGTGAAGCCGAGCAAGCGGCTGTCAGCGGCTCGTCGACACGGACAGAGCTGCACTAACTGTGGCTCCAGGAACACGACCCTCTGGAGGAGGAACAACGAGGGGGAGCCCGTCTGTAACGCGTGTGGACTCTACTACAAGCTGCATGGAATTAATAGaccTCTGGCTATGAGGAAGGATGGAATACAAACTAGGAAACGTAAGCCGAAGAAATCTACGAACGGTGTGAAGCCTTCCCCGGAGACGGCCAAGAAGGACGAACAGACGTCGCCAGGAGTCGACGGTATGTATAATGACTTAGCGATcgataattaa
- Protein Sequence
- MYGTSGDEWSATDGVLEAYEEGRECVNCGANNTPLWRRDSTGHYLCNACGLYHKINGVNRPLVKPSKRLSAARRHGQSCTNCGSRNTTLWRRNNEGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSTNGVKPSPETAKKDEQTSPGVDGMYNDLAIDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -