Basic Information

Insect: Danaus melanippus
Gene Symbol: zfh1
Assembly: GCA_010014825.1
Location: JAAAKD010000756.1:30947500-30950879[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0079 1.4 11.1 0.6 1 23 37 59 37 59 0.94

2 8 2.4e-05 0.0044 19.1 4.0 1 23 70 92 70 92 0.98

3 8 1.1e-06 0.0002 23.3 6.1 1 23 101 123 101 123 0.99

4 8 0.00011 0.021 16.9 1.0 1 21 129 149 129 150 0.95

5 8 0.52 95 5.4 0.2 2 19 410 427 409 427 0.95

6 8 8.5e-06 0.0016 20.5 1.1 1 23 729 751 729 751 0.94

7 8 7.1e-05 0.013 17.6 7.6 1 23 757 779 757 779 0.98

8 8 0.06 11 8.4 7.1 1 21 785 805 785 806 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0079	1.4	11.1	0.6	1	23	37	59	37	59	0.94
2	8	2.4e-05	0.0044	19.1	4.0	1	23	70	92	70	92	0.98
3	8	1.1e-06	0.0002	23.3	6.1	1	23	101	123	101	123	0.99
4	8	0.00011	0.021	16.9	1.0	1	21	129	149	129	150	0.95
5	8	0.52	95	5.4	0.2	2	19	410	427	409	427	0.95
6	8	8.5e-06	0.0016	20.5	1.1	1	23	729	751	729	751	0.94
7	8	7.1e-05	0.013	17.6	7.6	1	23	757	779	757	779	0.98
8	8	0.06	11	8.4	7.1	1	21	785	805	785	806	0.96

Sequence Information

Coding Sequence: atgaaagacattttattacTCCGGCCCCTAGCCGGTGGAGGCTCCGAGATCAAGACGTGTGAGGAGGAAGAGGATCGTGGTTCTTCGCCCCTGGGCCCCGGCGGGCCTTTCCCCTGCAGCCACTGTCGCGGAGCCTACCCGACGCGCGAACAGCTCGAGCGACATGAGACGCTACACGCGCCGAGCACTCAGGTGGATAGCATAAAATATACGTGCAAAATATGCCACAAGAGTTTTCAAAATGTGTACAGGCTTCAGCGTCACATGATAAGTCATGATGACAGCGCGAAGTTACGCAAATACAAATGTAATGACTGCGATAaagcatttaaatttaaacaccaTCTCAAAGAACATCTCCGGATACATAGCGGAGAGAAACCGTTCGAATGCGCCAACTGTGGAAAGAAGTTTTCACATTCCGGCTCGTATTCGTCTCATATGACTTCCAAGAAATGTCTTGTTATGAATCTCAAAATGGGAAGAATAAAGCCAAATAATCCAGCATTGAACCCGGACAGGAGTCCATCACGGAAGCGTGCAAATGCGATGGCAGCTAGtcagttgaataataatatcgcACCAAACGGCAATTCGTTTTTGCCAATATTGCCAAAATATAACGAAGCTGCAGCATTTTTCGCATCAATGTCATctcaagaaaataattttctgagATCCCCGTTGGGTCAACCTGGGTTAAATCCTTTCTATATGCCTCCTGGTATGCCAATGAGCCCAGCCAACGGTATTGCACCTTATACCTTCCCTACTTCATTAAGCCAATTATTTGAGCAACTAGCCTCTCAACATTACCAGCAACGAAAAATAGAGATTCCTAGTCCAAAGCTTGTAAGTCCACCCGCAAACCCTGAAGACTTAATCGAGGAAGTAGTAGACGAGGAAGATAAACGGTCCGAGGCCAGCGCAGAGCTAGTGATGGATATAGACGACGATGACAACGTTACCGTAAAGAAGGAACAAGAAGACCGGGACATTGAGGCGAGTTCTCCTTCCCGTAATTACGAATCTATCTTAAGTAGCAATGAACACGGCGAGTCCGACATCAATAAATCGGATTTTAATACTGTTAAAGCATCcgatactaaatattattttaagactcACAATGATCAGCAGTCTCCCATATCTGGCCAGGAATACCCTGGTGAAGTTTTACCATTGACGCAGATAAATGTTAAAGAGGAACCTGATATTGATACCTTACGTTGCTTAAAATGTAACATACTCTTCAATGACAAAAATGATTTATTGGAACATGACAAAGCAGTGTGTGGTAGTATTTTTAGAAAACATGAAGGACTAGCGGCTCAAGTGGCTGAGACGGTGGCTCTGAATAGATTAGAAGCTGAAATGCGAGCATCTATACAAAGTGGGGTAAGTGCTAGTGAAGATGAGGACTTCGGAAGAGAGGATCGGGAAGACAAAGCTTCCATAAACGAAAATGACAGAAAAATCAGAGTTCGCACCGCACTGACAGAAGAACAACAGACAGTGTTAAAAAGGCACTACTCGATTAATCCACGACCAAACCGAGAGGAATTTAAGAAGATAGCACAGCAGATAGGCTTAGACAACCGAGTAGTACAAGTTTGGTTCCAAAATAATAGAGCCAGAGTTCGTAGGATGACTCAAGCGGTCGCGATATCTGATCAACCTCTAGatttatctacaaaaaaatcaaatgcaTCTGTTACTTCAAGCCCGTCACCCTCACCGACATGCAGCATTTCAGTAACACATTCCGATTCTGAAGAAGCGGTTAATTTAAGTCAAAAATCTTCTCGCAGCACGACCCCACATCGCGCTAACTACATGAATACGTATCCACATTCCAACTGCTCGTCGTCATCGTTCACGGATTTTCGGTTATCACCCTCACCAGGTGAAACTATGAACGGTTACAAAAGAATGTTGCAACAGAAGATGCCCATCAATCCTATGATGCCGATGGACAAACTTCTTCATTATAACGACCTAAGTAACGGACGATCTCCAATTCTTAACATGCAAGTGCCTGAGAGGCAAGAATCCAGTCCGTCTTACGACCGCCCAATATGGAACGAGGATCTCCAGACTCAAATCGAATTAGAAGATGAAACCACTGTACTTAAAAAGAGCAAAATAAAGGCTGGAAATGAATTGAAAGAGGGAGAAGGACAATTCGTTTGTGATCAATGTGATAAAACTTTTGTCAAGCAAAGTTCTCTCGCCAGGCATAAATACGAGCACTCAGGCCAGCGGCCCTACAAATGCTTGGAATGTCCTAAGGCTTTCAAACATAAGCACCACCTGACTGAACACAAGCGGTTGCACACCGGCGAGAAACCGTTCCAGTGCTGCAAGTGTCTCAAGAAGTTCTCTCACTCCGGCTCATACAGCCAACACATGAACCACAGGTTCGCGATCTGCAAACCATACAGAGACTAA
Protein Sequence: MKDILLLRPLAGGGSEIKTCEEEEDRGSSPLGPGGPFPCSHCRGAYPTREQLERHETLHAPSTQVDSIKYTCKICHKSFQNVYRLQRHMISHDDSAKLRKYKCNDCDKAFKFKHHLKEHLRIHSGEKPFECANCGKKFSHSGSYSSHMTSKKCLVMNLKMGRIKPNNPALNPDRSPSRKRANAMAASQLNNNIAPNGNSFLPILPKYNEAAAFFASMSSQENNFLRSPLGQPGLNPFYMPPGMPMSPANGIAPYTFPTSLSQLFEQLASQHYQQRKIEIPSPKLVSPPANPEDLIEEVVDEEDKRSEASAELVMDIDDDDNVTVKKEQEDRDIEASSPSRNYESILSSNEHGESDINKSDFNTVKASDTKYYFKTHNDQQSPISGQEYPGEVLPLTQINVKEEPDIDTLRCLKCNILFNDKNDLLEHDKAVCGSIFRKHEGLAAQVAETVALNRLEAEMRASIQSGVSASEDEDFGREDREDKASINENDRKIRVRTALTEEQQTVLKRHYSINPRPNREEFKKIAQQIGLDNRVVQVWFQNNRARVRRMTQAVAISDQPLDLSTKKSNASVTSSPSPSPTCSISVTHSDSEEAVNLSQKSSRSTTPHRANYMNTYPHSNCSSSSFTDFRLSPSPGETMNGYKRMLQQKMPINPMMPMDKLLHYNDLSNGRSPILNMQVPERQESSPSYDRPIWNEDLQTQIELEDETTVLKKSKIKAGNELKEGEGQFVCDQCDKTFVKQSSLARHKYEHSGQRPYKCLECPKAFKHKHHLTEHKRLHTGEKPFQCCKCLKKFSHSGSYSQHMNHRFAICKPYRD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00213884;
90% Identity: iTF_00421246;
80% Identity: iTF_00420430;