Basic Information

Insect: Danaus melanippus
Gene Symbol: -
Assembly: GCA_010014825.1
Location: JAAAKD010000232.1:32168-36194[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 3.4 6.3e+02 2.8 0.0 9 21 93 105 92 106 0.89

2 7 5.4e-07 9.9e-05 24.2 0.4 2 23 430 451 429 451 0.97

3 7 3.4e-06 0.00062 21.7 0.7 1 23 457 479 457 479 0.99

4 7 7.2e-08 1.3e-05 27.0 2.1 1 23 485 507 485 507 0.98

5 7 4.4e-06 0.00081 21.4 2.6 1 23 513 535 513 535 0.97

6 7 6.7e-05 0.012 17.7 6.3 1 23 541 563 541 563 0.96

7 7 4e-05 0.0073 18.4 3.3 1 22 569 590 569 594 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	3.4	6.3e+02	2.8	0.0	9	21	93	105	92	106	0.89
2	7	5.4e-07	9.9e-05	24.2	0.4	2	23	430	451	429	451	0.97
3	7	3.4e-06	0.00062	21.7	0.7	1	23	457	479	457	479	0.99
4	7	7.2e-08	1.3e-05	27.0	2.1	1	23	485	507	485	507	0.98
5	7	4.4e-06	0.00081	21.4	2.6	1	23	513	535	513	535	0.97
6	7	6.7e-05	0.012	17.7	6.3	1	23	541	563	541	563	0.96
7	7	4e-05	0.0073	18.4	3.3	1	22	569	590	569	594	0.94

Sequence Information

Coding Sequence: ATGTGTGAATGGCTCTCGTGTGAAGAATGGTGCGATGTGTTTTTATTGTGCGGTGGGCGGGTATTCAGTGCTCACCGGGCAGTTCTAGCAAGCGTCAGCAAGTTTCTCAGAAAAATCCTTCTTTCATGTCCAGTAGAAGATTCGCCAACGTTTATTGTTATGCCGGAATTCGATTTTGATACTATGTCTTCCGTTCTTCATTACATATACAACGGTGAAGTCGCCATCAGCAAACACCAAGTACATACATTTTTGGATATCATGAACGCTTTACAAGTTTTCGTtgatacgaaagatttaaggaaacatttaaaaatcaataattatatttttgttgaggATACtttcaaaaaagaaaacataaccGGAAAAGATAACGTCACCTTAAGGAAAGAAATTCAGAAAAAGTCTTATGTAAGGCGTCGGTTTGATAAAGTAAATTTAGACCGAAGTAATATagattcaaatttttataagacCAAAGAAATCCGGCTGGGATATCTGAAATCTCTCAAAGACCGACAAAGCCAGCCATTTACtcgtgatttatttattgagacATATAGTCTGAACCGTAATGGTAACGGTGTTACAGAGGGCGTGCTCGCAATATCAAATGAACGTTATCGTGAACCAGGATCGCTTCTCGAGAAGAATTCTAATACTGAACATCACAAGGAAGTGGCCACAGAAACAACTTTTGACATAGGTCCTAgggataattttaattctttatgtaACACAAAACGTTTTGAAATTACAAGTAAGGAAAATATTGAAAGACTTGTTGGTATATACTTAGAAAACAGAACTAATGTGGAGGTTGAGAAGATACCTGAAAAGAATTATCTCAGTGACATCCAAGACGAAGAGATATCAAGGAAATCTATCGATCAAGAACACACTTCTATAGATTGTAGTATTATTTCTGGGCGTAGTTTAAATTTAGATACGGAAAATATGCAAAATGCGGTATCTAGGGTGTCGGAAGTAAATagtgaatttaataaaagcaaaGAAGTTGTTAGTAGAGTGACGATACTTAACGAGGTATTACAGAGCCCTTGGAGACCTCGACTGTCGCTTACTTTCACTCCTTATGCTAAGAAATGTATGGACTTGAAGCTAGATAAAGACAAAAGCATACAGTCAAAACAAAACGGAGTTTCgattaatgataaaaacaacaataataatgaatctaCCAAGGCTGAGAACAATAATAATGAGGCCACGAGCaacataaaagaaatgaaacagAGTCTTTCAAAAGACGAGTTCGCAACAACATGTCCAGTTTGCGGAAAATTCTTCAATGATAAAGGATATCTCAGTAGCCATATGAAAATACATAGaaacCGCAAGGAATATAAGTGTAATATGTGCCCAAAATCGTTCAATCAACGAGTTGCTTACAACATGCACGTTCGTATACACACAGGCGTCAAACCTCACGTATGCGATGAATGTGGTAAAGCGTTCTCACGGAAGATGTTACTGAAGCAGCATCAACGGACCCATAGCGGGGAGCGGCCTTACGCTTGTCAGCATTGTAACAAGAGATTCGCTGATAGATCTAATATGACCCTGCATTTAAGATTACATACAGGAGTGAAGCCGTTCGCTTGTACACTATGCCCTAAATCGTTTACCAAGAAACACCACCTAAAGTCTCACCTCAACTTCCACACTGGCGACAAACCTTACACATGCCCACGCTGCAAACTGGCTTTCACACAATCATCCAACATGAGAACACATATGAAGAAATGTAACGTTCATAAagattaa
Protein Sequence: MCEWLSCEEWCDVFLLCGGRVFSAHRAVLASVSKFLRKILLSCPVEDSPTFIVMPEFDFDTMSSVLHYIYNGEVAISKHQVHTFLDIMNALQVFVDTKDLRKHLKINNYIFVEDTFKKENITGKDNVTLRKEIQKKSYVRRRFDKVNLDRSNIDSNFYKTKEIRLGYLKSLKDRQSQPFTRDLFIETYSLNRNGNGVTEGVLAISNERYREPGSLLEKNSNTEHHKEVATETTFDIGPRDNFNSLCNTKRFEITSKENIERLVGIYLENRTNVEVEKIPEKNYLSDIQDEEISRKSIDQEHTSIDCSIISGRSLNLDTENMQNAVSRVSEVNSEFNKSKEVVSRVTILNEVLQSPWRPRLSLTFTPYAKKCMDLKLDKDKSIQSKQNGVSINDKNNNNNESTKAENNNNEATSNIKEMKQSLSKDEFATTCPVCGKFFNDKGYLSSHMKIHRNRKEYKCNMCPKSFNQRVAYNMHVRIHTGVKPHVCDECGKAFSRKMLLKQHQRTHSGERPYACQHCNKRFADRSNMTLHLRLHTGVKPFACTLCPKSFTKKHHLKSHLNFHTGDKPYTCPRCKLAFTQSSNMRTHMKKCNVHKD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00420672;
90% Identity: iTF_00420672;
80% Identity: iTF_00420672;