Basic Information

Insect: Danaus melanippus
Gene Symbol: -
Assembly: GCA_010014825.1
Location: JAAAKD010007556.1:18279633-18283586[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.002 0.37 13.0 2.4 1 23 353 375 353 375 0.97

2 9 3.3e-05 0.0061 18.6 1.2 2 23 415 437 414 437 0.96

3 9 0.00066 0.12 14.5 0.0 2 23 443 464 443 464 0.97

4 9 0.00017 0.031 16.4 1.6 1 23 470 492 470 492 0.98

5 9 2.9e-05 0.0053 18.8 0.3 3 23 499 519 499 519 0.99

6 9 2e-06 0.00036 22.5 1.3 1 23 528 550 528 550 0.99

7 9 5.8e-07 0.00011 24.2 0.6 1 23 556 579 556 579 0.97

8 9 0.17 32 6.9 0.9 1 12 585 596 585 608 0.88

9 9 0.12 22 7.4 2.2 1 23 616 639 616 639 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.002	0.37	13.0	2.4	1	23	353	375	353	375	0.97
2	9	3.3e-05	0.0061	18.6	1.2	2	23	415	437	414	437	0.96
3	9	0.00066	0.12	14.5	0.0	2	23	443	464	443	464	0.97
4	9	0.00017	0.031	16.4	1.6	1	23	470	492	470	492	0.98
5	9	2.9e-05	0.0053	18.8	0.3	3	23	499	519	499	519	0.99
6	9	2e-06	0.00036	22.5	1.3	1	23	528	550	528	550	0.99
7	9	5.8e-07	0.00011	24.2	0.6	1	23	556	579	556	579	0.97
8	9	0.17	32	6.9	0.9	1	12	585	596	585	608	0.88
9	9	0.12	22	7.4	2.2	1	23	616	639	616	639	0.95

Sequence Information

Coding Sequence: ATGTTACATAATACGGGAACATTTGATCAGAATGAAGTGCCAATTAAACAGAACAATCAAAACAATTTATCGTCTGAAGATAGGATTATATCCAGTAACAATATTATGTCCGAAAGTGATCAATCAGAACAAATACACTTCAGTGTGCCGTACCAGGTGAACTTAGGATTGACTCCATATAACCCTGGATTCGAAGTGTGTGCACAGACTTATCAAAACAATGGTCTCCCATTGGATTTGAATGTACAGAATAATTCagttttaaccaaaaatattccGCAAGTGTTTACAAAAGCGTATCACAAACAAATggatatagattataattacttGAATAGCTATAATCAATCTAATTACGATATAAATCACGTAAACACAACCAGCACGGCGCTAAGTTTGCTTAAACACGatgaagataataaaacaagtgaTATCAAACCACAGAgtgatatattaacaaaaatttgtcAAGAATCTAGTTATAAAATTGAAGTAGATTTATCAAGAGAAcctgtaaataatgtatatacagATAGGACCACAGTCTTAAGTAACAAATTGCTGAGAGACGATTCTAGGAAAAGGTTAGCGGACACAGTCAAGATCATTGAAAACATTATATCACATCCATCAAACTCGAGGAAGATTAAATTGGAACATAATATTAAAGCCGAAGACTACGATGACTTGTCAGAAACATCAGATACGGAATTTGTTATAAGCGAATCTGAGATTAATGATGTTGATGACAAGAAAAGTATAAGCAAGTCTTACAAACCAGAAATAGACCAAATAGACACACTATATGGTAGCATGAAAACCGAGAATTGGTCATCTAATGCTAACAAGATATCCAATGAAGATGCACAAGAGACTTCCACTAGAATGGCTGTGGTGCcatcaatattaaatgtagagCAGATCAATCCATTCCTAAAAGACACACACGGGGTTCAGAGTGATGAGACCAAAAATTATGACATTATTGGAGCTGAGAGCAGTATAAATGTTGCTAAGGAAATGATTAAAAAAGGTGCCTCACTAATAGCGACGTACTTCGAATGCCCCCACTGCAAGCTGTTCTTCAACAATCCAAAGAGATTTATAATACATACCAAATGGCATACATTTGGGTACATAACGGAGAAGAAATTAAGATCGCAAAAGGAGAAGATAGTTAAACCCAGAAGCAGGAAGTACAAAGTTAGTGGTAGTGATGATAATACCGAGGAAGGTGTCATACCTTGCACCGATTGCAAGAGAACCTTCAGCAGTACACCAAGTCTGATGAATCATAGGCGGAAATATCACCCGACGCGTCTAAGAGAATGCAAGATCTGTGGCAAATCTGTGGTGGGACTGGAAGCTCTGAGAGCGCACGTGGCTACTCACACCACAGAGTCCAGGTTCCAATGCGAAGATTGCCCAAAATGGTTCAAATATGCCCACTCGTTGGCTAAACATAGAGATACACATCTGGAGAAAACCGAGGGATGTCCTCAATGCCCAAAAAAGTTTGGTTCAACCGCCCTACTTAATGTTCATATGAAGACTCATGAGAGAGTACTCCGGGGAGCCACATTCAGATGTACCTACTGTGGGAAGGGATTCTTTGAAAGTTATAGCCTTCAGGCTCACGAACGCACGCACAGGAATGAAAGGCCTTTTGTGTGTGAGATATGTAACACTAGCTTCGGCACAAACAGCAGTCTCAAGCGGCATCTGAAAGTTTCCCACAGTACATCAAAGCCGTTTGAATGCACAACCTGTCACCGATCATTTGTGTCCGAGAACATCAGGGACCGGCACTTCATCAGATACCACGGGGACCCAGAAGAATTCAAATACATGTGCAAATTGTGCccgtgtaaatatttaaatgccaGGGAGTtgagaagacatgtatacaaAGTACATCCCAAACCCAAGATCAAGGTGGAAGTGGGCAGTGATTAA
Protein Sequence: MLHNTGTFDQNEVPIKQNNQNNLSSEDRIISSNNIMSESDQSEQIHFSVPYQVNLGLTPYNPGFEVCAQTYQNNGLPLDLNVQNNSVLTKNIPQVFTKAYHKQMDIDYNYLNSYNQSNYDINHVNTTSTALSLLKHDEDNKTSDIKPQSDILTKICQESSYKIEVDLSREPVNNVYTDRTTVLSNKLLRDDSRKRLADTVKIIENIISHPSNSRKIKLEHNIKAEDYDDLSETSDTEFVISESEINDVDDKKSISKSYKPEIDQIDTLYGSMKTENWSSNANKISNEDAQETSTRMAVVPSILNVEQINPFLKDTHGVQSDETKNYDIIGAESSINVAKEMIKKGASLIATYFECPHCKLFFNNPKRFIIHTKWHTFGYITEKKLRSQKEKIVKPRSRKYKVSGSDDNTEEGVIPCTDCKRTFSSTPSLMNHRRKYHPTRLRECKICGKSVVGLEALRAHVATHTTESRFQCEDCPKWFKYAHSLAKHRDTHLEKTEGCPQCPKKFGSTALLNVHMKTHERVLRGATFRCTYCGKGFFESYSLQAHERTHRNERPFVCEICNTSFGTNSSLKRHLKVSHSTSKPFECTTCHRSFVSENIRDRHFIRYHGDPEEFKYMCKLCPCKYLNARELRRHVYKVHPKPKIKVEVGSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00419951;
90% Identity: -
80% Identity: -