Basic Information

Insect: Danaus melanippus
Gene Symbol: -
Assembly: GCA_010014825.1
Location: JAAAKD010000756.1:17192208-17198156[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 0.013 2.4 10.4 5.2 1 20 195 214 195 217 0.93

2 31 0.0016 0.3 13.3 0.4 2 19 256 273 255 275 0.95

3 31 0.14 26 7.2 0.1 3 23 303 324 301 324 0.95

4 31 0.076 14 8.0 0.2 3 23 377 396 375 396 0.94

5 31 0.0023 0.42 12.8 0.1 1 23 411 433 411 433 0.96

6 31 0.00014 0.027 16.6 4.0 2 23 473 494 472 494 0.96

7 31 0.00064 0.12 14.6 4.5 2 23 536 558 536 559 0.96

8 31 0.012 2.3 10.5 1.2 1 23 608 631 608 631 0.95

9 31 0.00035 0.064 15.4 0.3 1 23 686 708 686 708 0.97

10 31 0.021 3.8 9.8 6.1 2 23 720 741 719 741 0.96

11 31 0.21 39 6.6 1.8 2 23 753 774 752 774 0.96

12 31 0.0049 0.9 11.8 0.7 1 23 784 806 784 806 0.98

13 31 0.0015 0.28 13.4 3.9 1 23 835 857 835 857 0.96

14 31 0.00075 0.14 14.4 3.4 1 23 868 890 868 890 0.98

15 31 0.012 2.3 10.5 1.5 1 23 898 920 898 920 0.96

16 31 0.00066 0.12 14.5 0.2 2 23 940 962 939 962 0.97

17 31 2.1 3.8e+02 3.5 0.3 1 23 980 1002 980 1002 0.85

18 31 0.099 18 7.7 3.7 1 23 1009 1031 1009 1031 0.97

19 31 0.00021 0.038 16.1 1.3 2 23 1042 1064 1041 1064 0.95

20 31 0.00058 0.11 14.7 0.5 1 23 1086 1108 1086 1108 0.97

21 31 1.4 2.6e+02 4.0 0.2 2 20 1112 1130 1111 1131 0.92

22 31 7.9 1.5e+03 1.7 5.9 2 23 1151 1173 1150 1173 0.94

23 31 0.0023 0.42 12.8 0.2 2 23 1189 1210 1188 1210 0.95

24 31 0.38 69 5.9 2.3 5 23 1220 1238 1217 1238 0.94

25 31 0.034 6.2 9.1 1.3 2 23 1249 1271 1248 1271 0.95

26 31 0.56 1e+02 5.3 4.2 2 23 1288 1306 1288 1306 0.89

27 31 0.081 15 7.9 1.1 2 21 1310 1329 1309 1330 0.94

28 31 2.4 4.4e+02 3.3 0.8 2 23 1351 1372 1350 1372 0.96

29 31 0.1 19 7.6 0.7 2 23 1379 1400 1378 1400 0.94

30 31 0.0082 1.5 11.1 0.5 2 23 1411 1433 1410 1433 0.95

31 31 0.66 1.2e+02 5.1 4.4 2 21 1471 1490 1470 1491 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	0.013	2.4	10.4	5.2	1	20	195	214	195	217	0.93
2	31	0.0016	0.3	13.3	0.4	2	19	256	273	255	275	0.95
3	31	0.14	26	7.2	0.1	3	23	303	324	301	324	0.95
4	31	0.076	14	8.0	0.2	3	23	377	396	375	396	0.94
5	31	0.0023	0.42	12.8	0.1	1	23	411	433	411	433	0.96
6	31	0.00014	0.027	16.6	4.0	2	23	473	494	472	494	0.96
7	31	0.00064	0.12	14.6	4.5	2	23	536	558	536	559	0.96
8	31	0.012	2.3	10.5	1.2	1	23	608	631	608	631	0.95
9	31	0.00035	0.064	15.4	0.3	1	23	686	708	686	708	0.97
10	31	0.021	3.8	9.8	6.1	2	23	720	741	719	741	0.96
11	31	0.21	39	6.6	1.8	2	23	753	774	752	774	0.96
12	31	0.0049	0.9	11.8	0.7	1	23	784	806	784	806	0.98
13	31	0.0015	0.28	13.4	3.9	1	23	835	857	835	857	0.96
14	31	0.00075	0.14	14.4	3.4	1	23	868	890	868	890	0.98
15	31	0.012	2.3	10.5	1.5	1	23	898	920	898	920	0.96
16	31	0.00066	0.12	14.5	0.2	2	23	940	962	939	962	0.97
17	31	2.1	3.8e+02	3.5	0.3	1	23	980	1002	980	1002	0.85
18	31	0.099	18	7.7	3.7	1	23	1009	1031	1009	1031	0.97
19	31	0.00021	0.038	16.1	1.3	2	23	1042	1064	1041	1064	0.95
20	31	0.00058	0.11	14.7	0.5	1	23	1086	1108	1086	1108	0.97
21	31	1.4	2.6e+02	4.0	0.2	2	20	1112	1130	1111	1131	0.92
22	31	7.9	1.5e+03	1.7	5.9	2	23	1151	1173	1150	1173	0.94
23	31	0.0023	0.42	12.8	0.2	2	23	1189	1210	1188	1210	0.95
24	31	0.38	69	5.9	2.3	5	23	1220	1238	1217	1238	0.94
25	31	0.034	6.2	9.1	1.3	2	23	1249	1271	1248	1271	0.95
26	31	0.56	1e+02	5.3	4.2	2	23	1288	1306	1288	1306	0.89
27	31	0.081	15	7.9	1.1	2	21	1310	1329	1309	1330	0.94
28	31	2.4	4.4e+02	3.3	0.8	2	23	1351	1372	1350	1372	0.96
29	31	0.1	19	7.6	0.7	2	23	1379	1400	1378	1400	0.94
30	31	0.0082	1.5	11.1	0.5	2	23	1411	1433	1410	1433	0.95
31	31	0.66	1.2e+02	5.1	4.4	2	21	1471	1490	1470	1491	0.94

Sequence Information

Coding Sequence: ATGGCACTCAAGCTAGGAAAATGCAGATTGTGCCTGAAACTGGGTGACTTCTATTCGATCTTCACTATGGATAACAATTTGCAGTTGGCGGAGATGGTAATGGAATGTGCTCGAGTTAAAATATATGAAGGTGATGGACTTCCGGATAAAATTTGTAGCGAATGTGTACAGAAACTTAGCAGTgctcatatttttaaacagcAATGTGAGAGATCAGATCAAGAGTTGAGACGCAATTATGTTCCCCCTCCAGATTTCAGCTCTACACCTCAGCCACCTAATAGACAGAGCAGTGACTCTGCGATTTCAACTCACCTGGAAGTTTCAAAGCCCTTGTCTTCAAATGATAGTAAATTGTCGATCGAGAGCAAGGTCACGCCCATCGGTCGTAACAGAAAACGCAGTAAGGATAGTATGGGTGAGGCATCCACCAGTAGCGACTGTAGACCAGCCAGTTCCAAAAGAGTCGAAGAATTGAAAAGGACACGCAAGAAGCCAAAAATGCTCCTGAATTACGATTCCGACTTCGACGACAGCGGCTCCTTTTACTCACAGGAAACCGATTCGGACGATCCGCTACTGCacaaatgtaatatatgttcCAGAGCATTCAAGTCAAAGAACAGCCTCTCCGCACATTCCAAAtgccataaaagaaaaaatgcagTAAAATATGACTCGGTGACCAAAGAAGATTCAATGTTGAATGCATATGTGCCGGAACTATCTAATGTGACAGACGCTCACGATGATGACGATAAACTGAAATGTGAAAAATGTGGGAAAGAATTCAAATTGAAGATAATGCTCAAGAGACACAACGAGAACTGTAGCGGGCCGCCCATGAAACAACTTCTGATATCTCTAGAGCCGATCAATGTTATACGTCAAAGAAACAGACTGGATTGCGAGCTCTGTTCCTTGAAATCTAGAACAATCGAAAGTTTAATGTTGCACATGAAGATCGTACACGGCGTGGAACTCGACAAGGACAAGGTGTGCATGAGGGATCGCGACGGGAAAATATGTGTACCGTGCTGTTACTGTGAAGAGAACATCGATGACTTCTATAAATACACCGCTCATGTTGGTGAATGTAACAAGAATAACAACGCCGCGGACATAGCGTGCCCCGTCTGCAAACAAACGACGACCAAATCAAATTACTTCATACACGTTAAGGGGCATTTCTTTCCAACTCGAAATGAATTTGAAGCTACACAAGAGAATTTCCAGTGCAGAATGTGCAACAAAGAGCTGCCGAGTCAGGAGTTGCTGATCAAACACTTGGCTGCTCACATGTCCAACATAGATGACGCCGATGAAGGAGGGGACGAAGAATCTcgAGCGAGTACAGTTGAAGACTGCGGCTCGATACATTCTGAATACAGCAATAACACTCCAAAAACAACCTTGCGCTGTCAACATTGTGATAAgacgtttaaatataaaaaggccTTACAATCTCACGAGGAGAAGCACAGAAGTGAAGTGAAGATAGAAGTTCCCGAAACACATCAGTCGGAAGATACTATTAACGAAATGGACCAATCGTTCGTGCAGTACGGCTCTGATACTAGTCAAGAAGACGGCGAAGACGATAACACGTGTGATATTTGTGAAAAACAATTCTCATACAAGAGACAGCTGTTGCAGCACAAGAGAACCAAGCACCACATGACGTCAGGCACGAAGAGGGCGAAGATCAACTTGAAGGACTGTTCGGTTCGGTGCTTGATATGCGACATAGAGATGAAGGTGAGCGCCATCAACGAACACAACCAGACGCACATCTCAGTGAACATCAAGCCCAGGAACCTGTACACGTGTATCGAGTGCACTCAACAGTTCAAGAGTTGCAGCGCTCTGGCCAACCACATCAAGTTGGTCCACAGGCTGAAACAACAGCTGATGGATTCTAAAATGAGAGCCGATTTGGCGGATTTTTGTGAAGTCGTTGTGACCAAGGCGGAACCCCTGGACGAGCTCCAGAATCACAACGGCGTAAATGAAAACTCCGCCACAGATGTTAAGCCTTTAGTGAACATGAGCGGTTTCAGCTGTCCCACCTGCAACAAAACCCTACCCACTCTGATATCACTCAAGAGGCATGTCAACTGGCACAATAATGTTGGTAAGAACATGGAAAAGAAATTGGAATGCTTTGTATGTAAGGAGACCTTCCGGTTCCAATGTCATTACAAACTGCACATGCGCGATCACTACAAGGACACGAATCTCGACCCGGCCTTACTGACCTGCTCTATCTGCAGCAGGAAGAGCAAGCACCTCCGCGCCGCTCAGGCACACATGAATTTCCATAAACAAACTCGCTTCCAGAGCAAGGATTACGAATGTTCGATATGCAAGAGAGTGTTCCAGTACCGGAAGGTGTACCTCTCGCACATGGCGATACATTACAAACGAGGCGAGAGCGCCAGCAACACTGTAGTCGGAGCCGAACTGCCCAATACAGTGGATAAAAACGCGTTCGACGGAACCTACAGCTGCCACCTGTGCGGGAAGGTCTGCGACTCGGAAACCTCGTTGAAACACCACGTGATCTGGCACAGCTCGAAAACCTCTCTGTACGGCGCTCGTCATCAGTGTGATATCTGCAATTTGCAGTTCACCAACAAGAAACGTCTCGAGCTCCATACTAGATCGCATTTCGAAGATGACAACGGACCATTCAAGTGTCACATCTGCGGGAAGGGGTACCTAGTCGAAGACTACTACAAGAGACACGTGAAGGGGCACAACTTTGATCATCAGTCGCATAAAAAGAGGATAGAGAGGCTCAGGAAAGACAAAGTGAAATGTCCGATTTGCTCGCGATACTATCCAGACTTGGTGAAACTGATCCGTCACCTGCGACGCACGCATCCGGAGAGTAAAATGATCAAACAGGACCCAAACGCCCCAACGACTCGTTATTATTCTTGCAAGCTGTGTGCGAAGGTCTTCTTAGACGAACGGAGGCTGCAGTACCACGAGGAGGCCCATCTCAGAAAGCCAGAGTTTTTCAAATGTAAGTTCTGTGGAAAGAAAACGATCTCCTTGAAAAATCATAGGGTTCACATAAAGGGTCACCTGACGCAGAAGTATATCGATAATCCTCTGAAATGTAATCACTGCGAAGAAACATTTACACGTGGCTACGACCTCCAGTACCACCTCCGAGACGCTCACGGCATCAATGAGACGTGGATAGCGGAACGCGGAGTGCAGACTCCCGACGGCCCGCTCAAAGAGTTCCAATGTTCcatatgctttaaaatattgGCCAGCAAAGGAAACTTCGAGAGGCACATCGACTACCACAACTCGCTCAGATGCAATTACTGTTTCGAGTATTTCGGTAGTTCCAGGTTTCTGGAAGGTCACCTCGCGTTCAGCTGCGCTAAGAAGAGACTCCTCGGCGACACCGAGATCTATCCCAAGAAGGTCAAGTGCCATATATGTTACAAGGCGTTCCATTTGCAGGTCAAGTTAGACTGTCATTTGCGCACTCAGCACGATATAAGAACATTCAAACAGGCTTTCGAAGAGAAAAAGGAAATCGTATGCGACTACTGTTTCAAAGTGTTTGAGAACGAATACGCTCTCAGCACTCACAAGATCTACCACCGGACCGTCGGCTACTACGGCTGTATATACTGCAATAGGAAATTCAATACTATGACCCTGTATAGGAAACATAAAAATCAGCACTTCTCTCAGCTCAATGTGGACAATCCCACGAAATGTGAACACTGCGATGAAACGTTCGTGGCCTTCAGGAAGATGATCTACCACATGAGAGACGTCCACGACGATCACAAGGAGTGGATCGTGTTGCCGAAGGAATCCAAAGAGGAGAAATGCAACATTTGTAACAAAACGTTCTTCAACCTTCACAGGCATCTGGATTATCACGAGGAGAACAAGTGCCAGAAGTGTGGGGAGTACTTCTACTCGCGGGCGGACTTCGACAATCATCTCTGTGCTATAGACAGCGAAGAGGAAGTCACCGAGACTAACACGAACGGCGATCGTTGCCCCTACGAGGAGTGCGCCTTCTGCTTTAAACCAGTCACcaagaaaaattcaaagaaaatgcATCTCCAAATCCATAGAGGGTCCGGATCTATATCCTGTCGATTCTGCGACCTCAAGTTCAAAACGATGGACGCTTTCAACATACACGCGTTTTCGCACAgaagtagaaaatataaaaagcaaccCATCAAATGTAGGAAGTGCGGCGAACAGTTCGTCAAGTACGGCCCCTTCATACGGCACATGAAGTTTGTTCACAAATCATTGAAGAAGCTCCACTACAGGGCGACCGTGATGCCGGAACAGTGCGTCGTCTGCAAACAAGACTTCCCCAACCTCCACAACCACTACCGAGCTCATCTACAGAACCAGTGCCATCTGTGTCTCAAGTACTTCACCTCATCAAAGTTATTTTCGTCGCACCAATGCGACAAGGAGGACTCTGATCCGACCAAAGTGTTCACATCCGAAGCTAACTTGACGGACCTGATCAACTCCTACGTACCGAGAGACGAAAAAGACGACGAGAAGTATTACGGATACGAAGATGAGGGCGAGAATATGGAAGAGAAAGCGAATGACAAGACGGAAGTGACGTCAAACGTGCCATCGCAGGATGAGGACAGCCAGAGCTCTATGAAGATAGAGGAAAAGAAATTACATTCGTTGGTGCACGCGCCCATTATATCAGATGTGCTGtcgctttataaaaataaatgtagcaaAAACAGTATTCACACAAAAGGAAACAAGAACAGCGTCAGTGGGAACGTTGTGGTGCTCACTGACGAGGACTCAGTGGACTACGAGTCCAACGAAGCCTCCGTCATCACAATAGACGACTAG
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTMDNNLQLAEMVMECARVKIYEGDGLPDKICSECVQKLSSAHIFKQQCERSDQELRRNYVPPPDFSSTPQPPNRQSSDSAISTHLEVSKPLSSNDSKLSIESKVTPIGRNRKRSKDSMGEASTSSDCRPASSKRVEELKRTRKKPKMLLNYDSDFDDSGSFYSQETDSDDPLLHKCNICSRAFKSKNSLSAHSKCHKRKNAVKYDSVTKEDSMLNAYVPELSNVTDAHDDDDKLKCEKCGKEFKLKIMLKRHNENCSGPPMKQLLISLEPINVIRQRNRLDCELCSLKSRTIESLMLHMKIVHGVELDKDKVCMRDRDGKICVPCCYCEENIDDFYKYTAHVGECNKNNNAADIACPVCKQTTTKSNYFIHVKGHFFPTRNEFEATQENFQCRMCNKELPSQELLIKHLAAHMSNIDDADEGGDEESRASTVEDCGSIHSEYSNNTPKTTLRCQHCDKTFKYKKALQSHEEKHRSEVKIEVPETHQSEDTINEMDQSFVQYGSDTSQEDGEDDNTCDICEKQFSYKRQLLQHKRTKHHMTSGTKRAKINLKDCSVRCLICDIEMKVSAINEHNQTHISVNIKPRNLYTCIECTQQFKSCSALANHIKLVHRLKQQLMDSKMRADLADFCEVVVTKAEPLDELQNHNGVNENSATDVKPLVNMSGFSCPTCNKTLPTLISLKRHVNWHNNVGKNMEKKLECFVCKETFRFQCHYKLHMRDHYKDTNLDPALLTCSICSRKSKHLRAAQAHMNFHKQTRFQSKDYECSICKRVFQYRKVYLSHMAIHYKRGESASNTVVGAELPNTVDKNAFDGTYSCHLCGKVCDSETSLKHHVIWHSSKTSLYGARHQCDICNLQFTNKKRLELHTRSHFEDDNGPFKCHICGKGYLVEDYYKRHVKGHNFDHQSHKKRIERLRKDKVKCPICSRYYPDLVKLIRHLRRTHPESKMIKQDPNAPTTRYYSCKLCAKVFLDERRLQYHEEAHLRKPEFFKCKFCGKKTISLKNHRVHIKGHLTQKYIDNPLKCNHCEETFTRGYDLQYHLRDAHGINETWIAERGVQTPDGPLKEFQCSICFKILASKGNFERHIDYHNSLRCNYCFEYFGSSRFLEGHLAFSCAKKRLLGDTEIYPKKVKCHICYKAFHLQVKLDCHLRTQHDIRTFKQAFEEKKEIVCDYCFKVFENEYALSTHKIYHRTVGYYGCIYCNRKFNTMTLYRKHKNQHFSQLNVDNPTKCEHCDETFVAFRKMIYHMRDVHDDHKEWIVLPKESKEEKCNICNKTFFNLHRHLDYHEENKCQKCGEYFYSRADFDNHLCAIDSEEEVTETNTNGDRCPYEECAFCFKPVTKKNSKKMHLQIHRGSGSISCRFCDLKFKTMDAFNIHAFSHRSRKYKKQPIKCRKCGEQFVKYGPFIRHMKFVHKSLKKLHYRATVMPEQCVVCKQDFPNLHNHYRAHLQNQCHLCLKYFTSSKLFSSHQCDKEDSDPTKVFTSEANLTDLINSYVPRDEKDDEKYYGYEDEGENMEEKANDKTEVTSNVPSQDEDSQSSMKIEEKKLHSLVHAPIISDVLSLYKNKCSKNSIHTKGNKNSVSGNVVVLTDEDSVDYESNEASVITIDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: iTF_00421538;
80% Identity: -