Dmel044861.1
Basic Information
- Insect
- Danaus melanippus
- Gene Symbol
- arid5b
- Assembly
- GCA_010014825.1
- Location
- JAAAKD010000477.1:17236-21812[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-14 1.6e-10 42.9 0.3 2 89 235 309 234 309 0.92
Sequence Information
- Coding Sequence
- ATGTTggaaacacacacacactctcACGGTACATTACATTCATGGGCTAGTATACTGGACTACAAGGATGTGGTGTCGCAGGACGAGGTGCTTGCTATTAATGACAAGGTGGTGTTGAGGGCGGAGGAGCTCCTCAGCTGGGTGTGCAGCGGCGCGGGCTGGCGGTGGGGGCTGCGGGCTGTGTGGCGGGGAGCCTGCGCGCCGCCCGCGGAGCCCCAGCACTCCGCCCCCCTGCATCACACCAAGCTAGACTTCAGCGACGTCGAGAGAGAGAAGAGTTCCATCACGGTGGATGTGGACGAACCTGGCGTGGTGGTGTTCTCGTACCCCCGGTACTGCCGGTACCGGGCCCTGGTCGCTCGCCTGGAGGGGATCCAGGCCGCCTGGCTCAGAGACTCGCTGGTGGCTGCGCTGGGCGGATACGCTGCTCCCACCAGGAACACTAGGATACTTTACTGTAAGGATACATTTGAGTACCCGGAACTGGAAGGTCACGAATTCGTCTGTAACCACCTAGCTCCTAAACTGAAAGGTCGTCCGCGGGGTCGGCGGAGGAGGGCGGCGAGATCGCGTGACCGGTCGCCCGACCAGTCGCCCGACTCGCGCTCCAGTGACAGTGACGCCATAGAGACCAGGACTCCTCGGAGGATATCACTCCGGAACGGTCCAGAAAAGATCAGCGAGGACGAGGACTCGGAGAAGGACGAGCAGTTCATGAAACAGCTAAAGGAGTTCCTCAAGGAGAAGAATGAAGCGGTGAAGGTCCCACATAGCTATAAAAatgTTTCTCTCCGGTCGCTGTACTCCTGGGTGTGGTCATCCGGTGGGTTCGCGGCAGCGTGTCGCGCGGGCGCGTGGCGGGAAAGGTACCGGGAAAACGCGCCCGCGCTACGACGGATATACGAGAGATATCTCCTCCAATACGAAAACCACGAGCGGTGGAACGGTAGGAAGTATCCGAAAATGAACGGCATCATAGACGGAGCGAAGACCATAGACACCATCGACGTCACGGACTCCCCGGTGCGGGACACCCCGGGACACACGGAGCTGCCGGCCAAGACGCTGCGCACACCCTCGCCCGCTCCGGAGAACCTGGTGCTGGACAACGAGACCGGGGAGATCACGAAAGAACTGAACATCACCTGCAAACCCGCCGAGGAACTGAACAGGGAGTTCCTGGACTCACTGCCCAAAGAAGAAAAACCGGCCAAGATCTTCGTGAAGCCCGTGGAGAAGCTGATAGAACCAGGTCTGCACAACAAGATGGGCCTGGACAGTGACGGGGGGTCCGCCTTCTTTAACGAATTGGCACAGAAATTAAACTTAGGTAACTCCGACACCCGCTTCCTCCAACAACTGTCAACGCCCGACAGCCTCACGAGTCTGTCCTCGTTAGGAGATAAGTACACGAACGGACACACCAACAACGACCAGAAGCCACGCAGTTCCCTGCGTGCTGTTCGCGTGAAGACCACACGAGCGCCCCCCACCGCCCCCACCAGTGAGtatacacacgcacacacacatttGAACAAGTGGCTGAACTTTGAGCTCTCCTCGGTTCATCCAGGAAGGCTTAGCATCAACCTGTAG
- Protein Sequence
- MLETHTHSHGTLHSWASILDYKDVVSQDEVLAINDKVVLRAEELLSWVCSGAGWRWGLRAVWRGACAPPAEPQHSAPLHHTKLDFSDVEREKSSITVDVDEPGVVVFSYPRYCRYRALVARLEGIQAAWLRDSLVAALGGYAAPTRNTRILYCKDTFEYPELEGHEFVCNHLAPKLKGRPRGRRRRAARSRDRSPDQSPDSRSSDSDAIETRTPRRISLRNGPEKISEDEDSEKDEQFMKQLKEFLKEKNEAVKVPHSYKNVSLRSLYSWVWSSGGFAAACRAGAWRERYRENAPALRRIYERYLLQYENHERWNGRKYPKMNGIIDGAKTIDTIDVTDSPVRDTPGHTELPAKTLRTPSPAPENLVLDNETGEITKELNITCKPAEELNREFLDSLPKEEKPAKIFVKPVEKLIEPGLHNKMGLDSDGGSAFFNELAQKLNLGNSDTRFLQQLSTPDSLTSLSSLGDKYTNGHTNNDQKPRSSLRAVRVKTTRAPPTAPTSEYTHAHTHLNKWLNFELSSVHPGRLSINL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00418757; iTF_00421135;
- 90% Identity
- iTF_00418757; iTF_00421135;
- 80% Identity
- -