Basic Information

Gene Symbol
Ubp1
Assembly
GCA_010014825.1
Location
JAAAKD010006213.1:1-7954[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.9e-31 3.8e-27 96.7 0.0 25 123 206 303 197 312 0.89
2 2 5.6e-25 1.1e-20 75.6 0.4 155 221 314 378 307 380 0.91

Sequence Information

Coding Sequence
ATGGTTGAAGACACTTTGAATTCCGACCGCATGTCGGCAGCCGCTGTTCTACAATTCGCGGCAAGAGAGGCAAGAGAAGGAAGAAGATTTGCTGAATTCGGCGCCCAAGCTTTCGCTAGTCTGACATACAATGCATATGCTAACCTCGATTTGGGGGGTAGCGGCACCAGCTCTTCCTCGTCACACCTGTCCCCGGGATGGCAGGTCAATGACCTGGATCTTGATCTGCCCGGGGAACTTTCCATGAATGAGGCCCTACTGTCGTTGCCGTCGTTGGCCGTGTTCAAGCAAGAGGCGCCTTCTCCTACTGGGAACGCGCTCTCTCCGCCGCGTAGGACCTGGCCAGTGAGACGGACGGATGATAGACAGATAACAAATATGGTTGTGGACAACCGGGAAACGATGGACGAGGGCTGCCAGCAACACGCTGGGGTCATGAATACGCAGTccAATAGCTCGGAAAGCATGCAGTGCCAATCCATGCCAGTCATAATGCCAATTAATGGCTACCATTCTCCTAATGGACaggaaaataaaaACGCTGGTCTCCTGATGTGTTCCCCGGCCAGCTCCCTGGATGGGTTCCTTCACTCTCCGAGGCCCGACTCTTGCTTCAAAGACGACAACAGATTTCAGTACGTCCTAGCGGCCGCCACGTCCATAGCGACCAAACAGAACGAAGAGACGTTGACTTACTTGAACCAGGGACAGCCTTACGAGGTCAAACTGAAGAAACTGGGAGACCTGGCGCACTACAAGGGGAAGATACTGAAGAGCATAATAAAGATCTGCTTCCACGAGCGCCGGCTGCAGTACATGGAGAGAGAGCAGATAGCACAGTGGCACAACGACAGGCCCGGAGAGAGGATATTAGAGGTGGACGTACCGCTGTCGTACGGTGTATCACGCGTGGAGCAACCAGCTGCCCTCAATGAACTGCATGTGAACTGCATATCAACAGAGTTCACAGCCAAGAAGCATGGCGGGGAAAAAGGCGTGCCCTTCCGTATACAGGTGGAGACGATGTATGAGGACAGGCGACTCCATACAGCTGCCTGCCAGATTAAGgTGTTCAAGTTGAAGGGCGCCGATCGTAAGCACAAGCAGGACCGAGAACGAGTACTGAGAAGGCCCAGGTCCGAGGTGGAGAGGTATCAACCTGGATGTGATGCAACTGTTCTGACGACGGTAAGGAATGGAAGGGATGAAATAAAGATTGTTACAGGTCCAGCATTCCAGAAGTTACATTTG
Protein Sequence
MVEDTLNSDRMSAAAVLQFAAREAREGRRFAEFGAQAFASLTYNAYANLDLGGSGTSSSSSHLSPGWQVNDLDLDLPGELSMNEALLSLPSLAVFKQEAPSPTGNALSPPRRTWPVRRTDDRQITNMVVDNRETMDEGCQQHAGVMNTQSNSSESMQCQSMPVIMPINGYHSPNGQENKNAGLLMCSPASSLDGFLHSPRPDSCFKDDNRFQYVLAAATSIATKQNEETLTYLNQGQPYEVKLKKLGDLAHYKGKILKSIIKICFHERRLQYMEREQIAQWHNDRPGERILEVDVPLSYGVSRVEQPAALNELHVNCISTEFTAKKHGGEKGVPFRIQVETMYEDRRLHTAACQIKVFKLKGADRKHKQDRERVLRRPRSEVERYQPGCDATVLTTVRNGRDEIKIVTGPAFQKLHL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00418733;
90% Identity
iTF_00421114;
80% Identity
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