Dere008708.1
Basic Information
- Insect
- Danaus eresimus
- Gene Symbol
- -
- Assembly
- GCA_018231745.1
- Location
- DVQP01005608.1:2566-7883[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 1.2 97 4.4 0.5 1 19 237 255 237 257 0.94 2 12 0.031 2.5 9.4 0.8 1 23 277 300 277 300 0.94 3 12 0.039 3.3 9.1 1.5 3 20 338 355 336 357 0.92 4 12 4.7 3.9e+02 2.5 1.2 1 23 362 384 362 384 0.73 5 12 6.5 5.4e+02 2.1 0.2 2 10 634 642 633 654 0.55 6 12 0.72 60 5.1 0.7 1 23 674 695 674 695 0.96 7 12 0.023 1.9 9.8 1.1 3 23 739 759 737 759 0.90 8 12 0.08 6.6 8.1 0.7 2 23 775 796 774 796 0.96 9 12 1.4e-07 1.2e-05 26.2 2.4 1 23 802 824 802 824 0.99 10 12 0.089 7.4 7.9 0.9 3 23 831 851 829 851 0.93 11 12 0.47 39 5.7 1.6 3 20 859 876 857 878 0.90 12 12 5.2e-05 0.0043 18.1 0.6 3 23 914 935 913 935 0.97
Sequence Information
- Coding Sequence
- ATGTTGGATGAAATCGAGGAGACCATAGCTCAGATGACGTCACACTCCATCCTCAAGAAGCTGAACCAGAGAAGTGAAGACAATCTGAAGTTTAATGTCAAAGTTGAAGTTGAGGAGGTGGAGGAACACCAGACAAACGATTTGAACATAACCATCGGCTCTGTCGTCAGTCTGAAGGGCACGGCTGATGATACACAGGCCCTGGCTGACGAAGAACGGAATCTAGATAATACAGGGGACACGAAGCCGCTGGTCCCTCAATACGACTTCAAAGCTGCAACCGTTATAGAAGAATTGAACAAAACGAAGAACAGAACTAACATAGCTGATGTGCTCATAGACGTTAATGTCCGGAATTATTTTGGACGATATTTCTTTAACTTCGACGCCGAGGTTAAGGAAGCCAAGTTGCTGGTGGTGTTCGCCAAGTGGCAGGCCTGGTGCAGGATGAACCCTGATGAGAGAGACGCTCCTCTCCTGTACAAGTGCTACACGTGCCGTCAGTCCTGGTGGCATTTCCATGAATTCAGAGAGCACTTCCATTGTCACGACAATTTTGATTTGGATTTAGATCAGTTCGGCCAGGAGTGCATCGTCTTCGCATACAGCGACGAAATACACCAGGACGATATCATCGCCACCGGAAACTGCTGGCGCTGCGGCAACGGCTTCCTCTTCCATCAGTACAAGAGGAGGTACAAAAAGCTATATGACTGCTCCGGGTGCCTGGCTAAATTCACGACCTGTTTAAAATTAGCCAACCATGTGGGCGGTTGCAGTTACTATAAGAGACATCTTGAGATTTCTGGCAAAAACGTCTCTCAGACACACCCCTGCGAGCTTTGTCCGGTGAGGTGCTTCAGCCGAAACGGTTTGGAGGCCCACATAAGAGATATGCACGCCGTAAGATCGGATCTGCCGATAATGACGAACCAGCAAGAGTGCAGCCACTGTTCCCAGCCCTGCGACGCACTGACACACGAATGCAAGAACGAACCGTATATAAAATGCTGCGAACTATGCGATAGGAAGTTCCACAGGCCAATAAATTACCAGATTCACGTagaaaataacagaaataagtACAAATGTAAGGTCTGCGACGAACAGCTGCCCGGACAGTGTATGGAGGTGAAGCATTTGATGAAGCacacaaataattatgtatatctatACAAATGTCTCCTCTGTCTCTCACCGGCGTACTTCAGCAAGAAAAATATCATGGAGGAACACAACAACGTGTGCCACCAAgagaataacaataaatatttctttgacgAGGTCGTTGTACCGAAGTCGCTGATCAAAAAGAAGACATCATTGGACAGACCCAGGGTAAGGCGGAAAGACCAAGTCAAGCCTGTGAAACAAGTACGGAACACAATGGAAGATGTACATGATATggGTCAAACCCAGCAAAGCAACACCGAACACCTGGAAACTAACGAGGCCATGTACAACTTGGAGCCAGTGATCACAATAAAGAAGGAATTGAATGATGATGACCTGATGAGAGAAATAAAACAGGAAGCCGAGGAGCTGATGATCTATGATGGTGTCGGTGATGACCTGGTGATCAAGCAGGAGATAGTGGAACATGTGATACAAGTGTGTGAATATGATGACATTAATGTGGGGATAAAAACAGAGCCGGCCCATGATGACGGGGTCACCAATGAGGAATACCTCTTGGATATAAGGAACCTGGCTTACAACTGCACcaaGTTATACAGCTGCAAGAAATGCCTCTTCCAAGGTGTGCACCGGGAGTACATGGAACATCTGAAGAGCAAGTGCCTTCACCGAACAAAGTACTACTGCAGCAAATGCAAAACAACATACCTGACGATGAAGAGGTATCTGGTACACTTCAGGAGACACGGCTACGAGGAGAACACCTGCCCCAAGTGCTTcaggacagtggaggtgaacCAGCTGATAGCGCACGTGTACCAACACATAAAGAACAGCTTCATTGGCTGCCACTACATCAACAACAAGACCTTCAACAAGTGCTACCAGTGCAGGGACTGCAGAGAGGTGGTGCAGTTCGGCGACTTCTTCAAGCACTGGGAGATGCATCTGGAACTGAAGACTGAAGACAGCACCGGCAGGAACGACCTGGTCGAGAACAAACCGCTTCTCAAAGAGCTCATAGCGCTCCTCCTCGGCGAGACCCTGGACGTGTCCAAGGAGTTGCACCCAAAGCAGTGCATCATGTGCCTGAAGCTGTTCTCCAGGAAGAACGACCTGAAGCGGCACCTCATAGAACACCTGCTGAACGACGCGTACCGGAACAGGCAGAAGTATGAGTGCCTCCGCTGCCAGATATGCAGCGTCGGCTTCAACAAGACGGACATCTACAAGCGTCACATGAGAGACCACGGGTCGCTGCCTCTCTACAAGTGTGAGATCTGCGACAAGACCTTCAGTGACTCCAGCAACTTCTCCAAACACAAGAAAGTCCACAACCTGTCCGTGGTCATCTGTGACATCTGTAACAAGAAATTCACCTGCAAGGCCATACTCGTCAAACACATGGAGttaCACAAGATCCTGAAGCCCATATCGTGTGAGTGCTGCTCGCGCGTGTTCCACTCCCCGTCGCTGTACCGGAAGCACCGGCTGGGGAAGAACAAGTTCAAGTGCCCCGCCTGCAAGGTGCTGTTCAACAAGCTGAAGGACAAGTGGGATCACATGTGGCTGGAGCACAAGGAGAGGAAGTATATCGCTGACTGTCCGATCTGTAAGAAATCCTTCAGGAAGTACCAAGACGTGAAGGTCCACATCAGGAGAGAACACGACGCCAAGTACGTTTACAGGCCCGTGTTGCACAAGGTTGATGAGGAGGAGATTATAGTGTGCGATTGA
- Protein Sequence
- MLDEIEETIAQMTSHSILKKLNQRSEDNLKFNVKVEVEEVEEHQTNDLNITIGSVVSLKGTADDTQALADEERNLDNTGDTKPLVPQYDFKAATVIEELNKTKNRTNIADVLIDVNVRNYFGRYFFNFDAEVKEAKLLVVFAKWQAWCRMNPDERDAPLLYKCYTCRQSWWHFHEFREHFHCHDNFDLDLDQFGQECIVFAYSDEIHQDDIIATGNCWRCGNGFLFHQYKRRYKKLYDCSGCLAKFTTCLKLANHVGGCSYYKRHLEISGKNVSQTHPCELCPVRCFSRNGLEAHIRDMHAVRSDLPIMTNQQECSHCSQPCDALTHECKNEPYIKCCELCDRKFHRPINYQIHVENNRNKYKCKVCDEQLPGQCMEVKHLMKHTNNYVYLYKCLLCLSPAYFSKKNIMEEHNNVCHQENNNKYFFDEVVVPKSLIKKKTSLDRPRVRRKDQVKPVKQVRNTMEDVHDMGQTQQSNTEHLETNEAMYNLEPVITIKKELNDDDLMREIKQEAEELMIYDGVGDDLVIKQEIVEHVIQVCEYDDINVGIKTEPAHDDGVTNEEYLLDIRNLAYNCTKLYSCKKCLFQGVHREYMEHLKSKCLHRTKYYCSKCKTTYLTMKRYLVHFRRHGYEENTCPKCFRTVEVNQLIAHVYQHIKNSFIGCHYINNKTFNKCYQCRDCREVVQFGDFFKHWEMHLELKTEDSTGRNDLVENKPLLKELIALLLGETLDVSKELHPKQCIMCLKLFSRKNDLKRHLIEHLLNDAYRNRQKYECLRCQICSVGFNKTDIYKRHMRDHGSLPLYKCEICDKTFSDSSNFSKHKKVHNLSVVICDICNKKFTCKAILVKHMELHKILKPISCECCSRVFHSPSLYRKHRLGKNKFKCPACKVLFNKLKDKWDHMWLEHKERKYIADCPICKKSFRKYQDVKVHIRREHDAKYVYRPVLHKVDEEEIIVCD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00421811;
- 90% Identity
- -
- 80% Identity
- -