Basic Information

Insect: Danaus eresimus
Gene Symbol: -
Assembly: GCA_018231745.1
Location: DVQP01000388.1:12904-14382[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3.6e-05 0.003 18.6 1.5 2 23 20 42 19 42 0.95

2 14 0.0001 0.0083 17.2 0.5 1 23 47 70 47 70 0.96

3 14 1.8e-05 0.0015 19.6 0.2 1 23 75 98 75 98 0.97

4 14 0.00086 0.071 14.3 0.5 2 23 101 123 101 123 0.96

5 14 0.41 34 5.9 1.9 3 22 132 151 131 151 0.95

6 14 0.0022 0.18 13.0 0.8 1 23 203 226 203 226 0.96

7 14 0.0028 0.23 12.7 0.2 2 23 254 276 253 276 0.94

8 14 0.015 1.2 10.4 0.0 2 23 298 320 297 320 0.95

9 14 6.9e-06 0.00057 20.9 0.3 3 23 327 348 326 348 0.94

10 14 0.004 0.33 12.2 3.7 2 23 353 375 352 375 0.93

11 14 0.00017 0.014 16.5 3.2 1 23 380 403 380 403 0.97

12 14 4.3e-05 0.0036 18.4 5.3 1 23 407 430 407 430 0.97

13 14 0.00011 0.0091 17.1 0.6 2 23 437 458 436 458 0.97

14 14 2.5e-05 0.0021 19.1 1.1 1 23 464 486 464 486 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3.6e-05	0.003	18.6	1.5	2	23	20	42	19	42	0.95
2	14	0.0001	0.0083	17.2	0.5	1	23	47	70	47	70	0.96
3	14	1.8e-05	0.0015	19.6	0.2	1	23	75	98	75	98	0.97
4	14	0.00086	0.071	14.3	0.5	2	23	101	123	101	123	0.96
5	14	0.41	34	5.9	1.9	3	22	132	151	131	151	0.95
6	14	0.0022	0.18	13.0	0.8	1	23	203	226	203	226	0.96
7	14	0.0028	0.23	12.7	0.2	2	23	254	276	253	276	0.94
8	14	0.015	1.2	10.4	0.0	2	23	298	320	297	320	0.95
9	14	6.9e-06	0.00057	20.9	0.3	3	23	327	348	326	348	0.94
10	14	0.004	0.33	12.2	3.7	2	23	353	375	352	375	0.93
11	14	0.00017	0.014	16.5	3.2	1	23	380	403	380	403	0.97
12	14	4.3e-05	0.0036	18.4	5.3	1	23	407	430	407	430	0.97
13	14	0.00011	0.0091	17.1	0.6	2	23	437	458	436	458	0.97
14	14	2.5e-05	0.0021	19.1	1.1	1	23	464	486	464	486	0.97

Sequence Information

Coding Sequence: atggaTTATGATAGGAATATAGATATACCACTCCGAGAATACAGACTGAGCGATTGCAAATGTCAAATGTGTGGCAAACAGTTCAGTTACTTCGGATATcttattaatcatataaatatagtgcATTCGGTAAATAAATATGCGTGCGACAATTGTGGCTCtacgtttaataaaaagagagATCTGGCCTTGCATATACGTCAATATCATCGCGATGGTGGCTATCCTTGCGACGATTGTTCAGAGGTGTTCGAAACAAACATACAGCTTAAGAAACATTCAAATACAGTCCATTACAGGAAGTGTAAGACGTGCGAAGCTAGGTTCCCATCGTACGTCTTGTTGCAGAAACACATTAAACTCGATCATCCGAACGACGAAACCCAAAAACTGTGTGTTTACTGTTCGAAAGAGTGTCAATCATCTCAGGGTATGAAACAGCACATGAAGAAGTGCAAATTGAAAAAGGAATTGATCACAGCTCCGATATTTCCGTACGAAAATCCTCTACAGCCGAAcaagaaacaaaatgttatgcaaataagaaaaaatatacaatgcgTTCTCAACATGTCAACGGCgattccatttaaatttttcgcCAAATTTTCTTGCTTTTACtgttctaaatattttgtcgAATTTGATGAACTTAAGGTCCACGTGCTATCGGATCATCCAATTTGTGATTTAAAagagaaatgtattaaaaattgtaaaggtGAAAGAATTACTGTCAAAATTGATATATCAACATTGTCATGTAAGATTTGTTACCAATCAGTATCGGATTTAGACGATCTGATACAGCATCTAACCTCCAAACATTTAGCAATATAcgataaatcaataaaatgctTCGAACcgtttagaattataaaagacaatattCCATGCCCGATCTGTCCGAACGTTTTTCGTTATTTCGGCATTCTCTTGAGGCACATAAATTCCGAACATAGCAATAACAACCGAATATGTGATTTTTGTGGTCGCAGTTTCAAAAACGTATCAAATCTCAAAGTTCATATTACTTACGCACACACCGGTGACTGCGAATGCGATGTTTGTGgaatgaaattcaaaaatcAATGGTGCTTAGGACGGCACAAAGCTAAATCACACGACGCGAAAGATTACAAATGCCCGAAATGTCCAGAGAGATTCCAGTCTCAGTATCACAAACAGAAACATCTCATTAAAGTGCATGATATCGGTCACAAGTGTACGTATTGCGATAGAATGTTTACACGGAACTCGTTCATGAAGGATCACGTGAGGCGGACGCATTTGAAAGAGAAAAACGTCCAATGCTCTGTTTGTAATGAGAAGTTCTTTGACAATTACCTTCTAAGAATGCATATGGTGAAACATAAAGGCGAGAGGAAGTTTAGTTGCGAGGTTTGTGGCAAGACTTTCTTGAGGAGAAGTAATTTGAGCTCCCACAAGGAGATGCACAAAAAATACGgacatgtataa
Protein Sequence: MDYDRNIDIPLREYRLSDCKCQMCGKQFSYFGYLINHINIVHSVNKYACDNCGSTFNKKRDLALHIRQYHRDGGYPCDDCSEVFETNIQLKKHSNTVHYRKCKTCEARFPSYVLLQKHIKLDHPNDETQKLCVYCSKECQSSQGMKQHMKKCKLKKELITAPIFPYENPLQPNKKQNVMQIRKNIQCVLNMSTAIPFKFFAKFSCFYCSKYFVEFDELKVHVLSDHPICDLKEKCIKNCKGERITVKIDISTLSCKICYQSVSDLDDLIQHLTSKHLAIYDKSIKCFEPFRIIKDNIPCPICPNVFRYFGILLRHINSEHSNNNRICDFCGRSFKNVSNLKVHITYAHTGDCECDVCGMKFKNQWCLGRHKAKSHDAKDYKCPKCPERFQSQYHKQKHLIKVHDIGHKCTYCDRMFTRNSFMKDHVRRTHLKEKNVQCSVCNEKFFDNYLLRMHMVKHKGERKFSCEVCGKTFLRRSNLSSHKEMHKKYGHV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -