Basic Information

Gene Symbol
-
Assembly
GCA_018231745.1
Location
DVQP01003354.1:1008-6686[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 3.1 4e+03 -1.3 0.0 1 13 73 85 73 88 0.88
2 6 9.9 1.3e+04 -2.9 0.0 23 31 233 241 218 243 0.77
3 6 0.047 60 4.6 0.0 21 45 341 366 312 367 0.75
4 6 0.0021 2.7 8.9 0.3 22 43 444 464 416 467 0.82
5 6 0.0096 12 6.8 0.1 23 45 592 613 569 614 0.86
6 6 3e-05 0.039 14.8 0.2 3 44 665 715 663 717 0.79

Sequence Information

Coding Sequence
atggaacaaATCGTGGTTAAAACTGAGGTGCAACCAAACGGAGACATACTACTATTTTATGTTGATGAAAATGAAGAAGCAGATGCTGGGACATTTGATCATGAAAATGGGAATGTCATGCATATGCTGCCggaaacaaaatatgtgaTAGAAGATAATGGAGAAGGTGAATCTGCCGATGAACTGGATATAGCACAAGCTGCTGAAGAAGTTGCTAAAGAAAATTGGCTGAATGAGGAAATAAAAAGGcttattgttttctatattgataataaagaaacattcCTTAGTGGGacaacaaagaaaaaacatttgtgGGCTGTAGCTTGCAGAACTATACTCATGGGCAAAAATCCAGTTTCATGTGAAGTTAAATTACGAATGCTCAAACAACAATTCATACAACTAtgtttagaaaaacaaaaagggAATATTGTCACTTGGCCCTATTACGATCTTTGCCATCAAGCATTCTATGAAGATAGCTTTGAAACTGTCACAAACGATTCTGAACCAAATAAAGTTGTTATTAACATGCCCATACAGAATGTTGTCAATCAAGATGGAATCTTAgtagtaaagaaaattaatagcaGTCAGGGTAAAGACATTGATGATAAAGTTGAAGCTATGctcaaactttatataaagcataAGAAAACGTTCAAGAGGAATAATCATATGCCGAGAGGTTTGTGGGAAACCATAGCATTAGAAATGGGTGAAGACGATGTGGAATACTGGCACAAAAGGTTTCTGAATTTCAAACAGCATTATGTCAGAatgctttataaaaagaaagaaagcGGCCCTGAAAATATTCATTGGccatatatgaaatatttcgaTCACATCTTCTGTGACGATGAGGAATTTCAGAAGAAATTTCTTCCCATCAACGAAGATGATGACAGCCAAGACAATGAACTCCAAGAAGATACTTGGAGTGATACAGAAAAAACTTTCCTGGTGAAATATTACTATGATTGCTTCCAAGAATTTCAAGATTCGACCATACCAAACAAATTCCTATGGCAGGAAGTTGGTAGGTTACTTGATAGAAAACCAGAGGTTTGCAAGGATAAATACAATGAGTTAAAGAACCAACATTTCAATTTACTCCTAGAAAGGGTCTATGATATGACCAATAGAGTGCCAATGGCCATAATTTTTGACAATATCATCGCCAAAGAGACGTTGATCGAATTAGATCAGCCAGCGAGAAAGTCGGATTCTACCGACATATGGAAGACTGAGCAAATTGACGAATTGGttgaatatttgtatgaaaatataaatatgttaaaagatCCCATATGTTACTACGTCTGTTGGGCAACCATATCTAAGAAAATCGAGAGAACTGTACAATCCTGTATGAAACAGTGGGATTCATTAAAAAGTCTTTATAAAAGCATCTTGGAGGATAAGAAGGAAAATTCTGACATGCAAATAGATTGGAGATACATAGATCTGTTTGACAGGATATTTGACTACGGCATGGATACAAACTTGCTGGATGGCTACGAAAAAACGAAAGAGCACAGCAATAACAATAGCAACGGAAAAGTTGGGGTTAAAAAGATCACTATAAAGGGAGATTACGAAAATTTTGCTACGGACGGTACGGACGATGAAGAATCTTATGACGAGAGAGGTTTCACAAAACGTTCCAAGAAAAGAAACGGTGACACGAAAGCCTTCAAGATATTAGAGTACTATTTGAAGAACAAAGACAAATTTTCATCGTcccaacaaaaaaaactagcTCTATGGGAAATACTAGCAAAACAAATTGGACTATCGGCTACAGAATGTGCCCATAGATTTCGTAATTTCAAGCAAGTTTACATAGGTTACGTTCAAcgggaaataaataaaccggAAATGCCAATATTATGGCCATATTACACGTTATGCAAGAAAGTTTTCGGATACAGGGCTATAAAGTCCAAGTTAAAGAATGGAAAACTAGAATCTGAAGACGGGGAAGATTGGTCGGCGAAGGAAATAAAGCAATTGATAAACTATTTCTCAAGAAACTATCACGATCTGGTTGATAATATCGAAGATAAGTCCAGATGGGCCCAAGTAGCACAGGAAATGGGCAGGACTGAGGGTAGTTGTTGTGATAAGTTTCTAGAATTAAGAAAGTCCTACAGGAAATTGAAGACGATGAAGTCGAGGAATCCAGATGTTAAGGTGTCGTGGAAGTATTTCAATATGATCGACGAGATATATCAAAATGGTGCCGAGAATATAGAGGTCTTGGAAGAAATGGATTTTGAAGAAACCAGCTCCTTTGATGTTAAGACGGAAATTCAAGAAGacGATGACTTCCAATGCATTATAGTTGTACCAGAGGGAGATGACATCAATAATGCTCAGATTATAATTCAAGAAGAGAAGAACTCAACAGAAGACAACACAGAGACAGCGGAGAATCTAGAAGACTTTGTGAGTCCCAAATTCGAGAAGAGATATCTATGGATAGAACTTGCCAAATATATATCTGAATCGGTGACAAATgtgtatagtaaaataaattatatgaagcaGAATCATGATAATATCGAGTCACCATTCCGTGAAGTTGTGCAAGACATTATTGCCAAGGAAAATACATTGAAGGAAGTTAATAAAGATTTGAGTACAGTCAAAGACGATGAACCCGAAGGACAAATGTGGTCTGATTTGGAGATTGAGCGTCTCTTGACCTGGTATTTGGCACATTTGGACAAATTCAAGAATCCAAAATTCGTCAGAAGCTACCTTTGGATGGAGGCGTcggatatattgaagaaaaGTCCACTGGTCTgttcaaagaaaatgttagAAATAAGATCACAATACAGAAGTATGGTTAAGGAGAATCCAGAAGAATTAAACAattggaaattttataatctatgtCAAAGAATTTACGGAACCGGAAAGAAGAGTAATTAA
Protein Sequence
MEQIVVKTEVQPNGDILLFYVDENEEADAGTFDHENGNVMHMLPETKYVIEDNGEGESADELDIAQAAEEVAKENWLNEEIKRLIVFYIDNKETFLSGTTKKKHLWAVACRTILMGKNPVSCEVKLRMLKQQFIQLCLEKQKGNIVTWPYYDLCHQAFYEDSFETVTNDSEPNKVVINMPIQNVVNQDGILVVKKINSSQGKDIDDKVEAMLKLYIKHKKTFKRNNHMPRGLWETIALEMGEDDVEYWHKRFLNFKQHYVRMLYKKKESGPENIHWPYMKYFDHIFCDDEEFQKKFLPINEDDDSQDNELQEDTWSDTEKTFLVKYYYDCFQEFQDSTIPNKFLWQEVGRLLDRKPEVCKDKYNELKNQHFNLLLERVYDMTNRVPMAIIFDNIIAKETLIELDQPARKSDSTDIWKTEQIDELVEYLYENINMLKDPICYYVCWATISKKIERTVQSCMKQWDSLKSLYKSILEDKKENSDMQIDWRYIDLFDRIFDYGMDTNLLDGYEKTKEHSNNNSNGKVGVKKITIKGDYENFATDGTDDEESYDERGFTKRSKKRNGDTKAFKILEYYLKNKDKFSSSQQKKLALWEILAKQIGLSATECAHRFRNFKQVYIGYVQREINKPEMPILWPYYTLCKKVFGYRAIKSKLKNGKLESEDGEDWSAKEIKQLINYFSRNYHDLVDNIEDKSRWAQVAQEMGRTEGSCCDKFLELRKSYRKLKTMKSRNPDVKVSWKYFNMIDEIYQNGAENIEVLEEMDFEETSSFDVKTEIQEDDDFQCIIVVPEGDDINNAQIIIQEEKNSTEDNTETAENLEDFVSPKFEKRYLWIELAKYISESVTNVYSKINYMKQNHDNIESPFREVVQDIIAKENTLKEVNKDLSTVKDDEPEGQMWSDLEIERLLTWYLAHLDKFKNPKFVRSYLWMEASDILKKSPLVCSKKMLEIRSQYRSMVKENPEELNNWKFYNLCQRIYGTGKKSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00958623;
90% Identity
-
80% Identity
-